EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009222 (Gene tree)
Gene ID: -
Gene Symbol: chd3
Alias: -
Full Name: chromodomain helicase DNA binding protein 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 50768 bases
Position: chr3:19075414-19126181
Accession: ZDB-GENE-121031-4
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000013610	ResIII	PF04851.15	8.2e-08	1	1
ENSACLP00000013570	ResIII	PF04851.15	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000013902	-	5388	-	ENSACLP00000013570	1795 (aa)	-	-
ENSACLT00000013944	-	3459	-	ENSACLP00000013610	1152 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009222	chd3	92	67.972	ENSACLG00000024468	-	95	67.125
ENSACLG00000009222	chd3	95	66.853	ENSACLG00000003012	chd5	96	66.463
ENSACLG00000009222	chd3	94	64.928	ENSACLG00000015837	chd4a	95	65.488

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009222	chd3	99	74.804	ENSG00000170004	CHD3	91	78.816	Homo_sapiens
ENSACLG00000009222	chd3	85	94.098	ENSAPOG00000005614	chd3	97	88.559	Acanthochromis_polyacanthus
ENSACLG00000009222	chd3	70	75.842	ENSAMEG00000003025	-	91	84.216	Ailuropoda_melanoleuca
ENSACLG00000009222	chd3	87	92.634	ENSACIG00000019671	chd3	99	92.634	Amphilophus_citrinellus
ENSACLG00000009222	chd3	99	93.030	ENSAOCG00000023784	chd3	99	91.101	Amphiprion_ocellaris
ENSACLG00000009222	chd3	99	91.642	ENSAPEG00000006341	chd3	91	96.203	Amphiprion_percula
ENSACLG00000009222	chd3	100	90.300	ENSATEG00000000848	chd3	99	87.087	Anabas_testudineus
ENSACLG00000009222	chd3	99	75.155	ENSACAG00000004276	CHD3	88	80.564	Anolis_carolinensis
ENSACLG00000009222	chd3	97	74.283	ENSANAG00000034323	CHD3	93	78.816	Aotus_nancymaae
ENSACLG00000009222	chd3	99	73.622	ENSBTAG00000014377	CHD3	90	79.932	Bos_taurus
ENSACLG00000009222	chd3	99	74.804	ENSCJAG00000014766	CHD3	91	78.816	Callithrix_jacchus
ENSACLG00000009222	chd3	99	73.481	ENSCAFG00000016859	CHD3	90	80.449	Canis_familiaris
ENSACLG00000009222	chd3	97	76.015	ENSCAFG00020007422	CHD3	99	75.420	Canis_lupus_dingo
ENSACLG00000009222	chd3	99	73.508	ENSCHIG00000016737	CHD3	91	80.707	Capra_hircus
ENSACLG00000009222	chd3	99	74.921	ENSTSYG00000035658	CHD3	93	81.029	Carlito_syrichta
ENSACLG00000009222	chd3	99	70.885	ENSCAPG00000014864	CHD3	90	80.707	Cavia_aperea
ENSACLG00000009222	chd3	99	73.265	ENSCPOG00000022653	CHD3	90	80.707	Cavia_porcellus
ENSACLG00000009222	chd3	99	74.804	ENSCCAG00000034792	CHD3	91	78.816	Cebus_capucinus
ENSACLG00000009222	chd3	99	74.699	ENSCATG00000041717	CHD3	91	78.816	Cercocebus_atys
ENSACLG00000009222	chd3	99	74.607	ENSCLAG00000010523	CHD3	92	80.707	Chinchilla_lanigera
ENSACLG00000009222	chd3	99	73.646	ENSCSAG00000011122	CHD3	92	78.816	Chlorocebus_sabaeus
ENSACLG00000009222	chd3	93	77.788	ENSCPBG00000011966	CHD3	99	77.670	Chrysemys_picta_bellii
ENSACLG00000009222	chd3	99	74.699	ENSCANG00000037641	CHD3	94	78.816	Colobus_angolensis_palliatus
ENSACLG00000009222	chd3	99	74.084	ENSCGRG00001011306	Chd3	98	74.136	Cricetulus_griseus_chok1gshd
ENSACLG00000009222	chd3	99	70.769	ENSCGRG00000007878	Chd3	98	70.546	Cricetulus_griseus_crigri
ENSACLG00000009222	chd3	99	88.847	ENSCSEG00000004489	chd3	100	89.608	Cynoglossus_semilaevis
ENSACLG00000009222	chd3	93	90.444	ENSCVAG00000007293	chd3	95	91.803	Cyprinodon_variegatus
ENSACLG00000009222	chd3	100	85.325	ENSDARG00000021405	chd3	99	85.512	Danio_rerio
ENSACLG00000009222	chd3	75	90.323	ENSDNOG00000047846	CHD3	83	85.435	Dasypus_novemcinctus
ENSACLG00000009222	chd3	99	74.305	ENSDORG00000010713	Chd3	98	73.361	Dipodomys_ordii
ENSACLG00000009222	chd3	98	69.207	ENSETEG00000017733	CHD3	91	83.764	Echinops_telfairi
ENSACLG00000009222	chd3	78	73.278	ENSEBUG00000008310	chd3	89	73.186	Eptatretus_burgeri
ENSACLG00000009222	chd3	95	74.729	ENSEASG00005019360	CHD3	93	81.029	Equus_asinus_asinus
ENSACLG00000009222	chd3	95	74.837	ENSECAG00000010051	CHD3	93	81.350	Equus_caballus
ENSACLG00000009222	chd3	88	91.753	ENSEEUG00000015205	CHD3	81	91.753	Erinaceus_europaeus
ENSACLG00000009222	chd3	87	80.269	ENSELUG00000019499	chd3	99	80.367	Esox_lucius
ENSACLG00000009222	chd3	99	73.364	ENSFCAG00000009629	CHD3	88	80.064	Felis_catus
ENSACLG00000009222	chd3	97	74.601	ENSFDAG00000008220	CHD3	88	80.386	Fukomys_damarensis
ENSACLG00000009222	chd3	97	79.624	ENSGMOG00000013599	chd3	91	84.045	Gadus_morhua
ENSACLG00000009222	chd3	93	87.191	ENSGAFG00000004055	chd3	99	89.336	Gambusia_affinis
ENSACLG00000009222	chd3	99	91.195	ENSGACG00000019275	chd3	95	91.195	Gasterosteus_aculeatus
ENSACLG00000009222	chd3	81	79.876	ENSGAGG00000013164	CHD3	96	76.557	Gopherus_agassizii
ENSACLG00000009222	chd3	99	74.751	ENSGGOG00000013496	CHD3	94	78.816	Gorilla_gorilla
ENSACLG00000009222	chd3	99	74.660	ENSHGLG00000012017	CHD3	91	80.707	Heterocephalus_glaber_female
ENSACLG00000009222	chd3	89	67.982	ENSHGLG00100013902	CHD3	90	84.190	Heterocephalus_glaber_male
ENSACLG00000009222	chd3	96	85.624	ENSHCOG00000010170	chd3	88	90.323	Hippocampus_comes
ENSACLG00000009222	chd3	93	80.456	ENSIPUG00000003271	chd3	96	80.351	Ictalurus_punctatus
ENSACLG00000009222	chd3	99	74.843	ENSSTOG00000025907	CHD3	92	80.707	Ictidomys_tridecemlineatus
ENSACLG00000009222	chd3	99	74.817	ENSJJAG00000017633	Chd3	92	79.495	Jaculus_jaculus
ENSACLG00000009222	chd3	99	91.331	ENSKMAG00000019292	chd3	100	91.331	Kryptolebias_marmoratus
ENSACLG00000009222	chd3	90	92.697	ENSLBEG00000028485	chd3	93	84.529	Labrus_bergylta
ENSACLG00000009222	chd3	98	70.671	ENSLACG00000008031	CHD3	78	71.881	Latimeria_chalumnae
ENSACLG00000009222	chd3	99	82.317	ENSLOCG00000013965	chd3	88	88.959	Lepisosteus_oculatus
ENSACLG00000009222	chd3	91	83.995	ENSLAFG00000000572	CHD3	87	88.210	Loxodonta_africana
ENSACLG00000009222	chd3	99	74.699	ENSMFAG00000020113	CHD3	93	78.816	Macaca_fascicularis
ENSACLG00000009222	chd3	99	72.661	ENSMMUG00000022221	CHD3	91	78.438	Macaca_mulatta
ENSACLG00000009222	chd3	99	74.699	ENSMNEG00000001728	CHD3	94	78.816	Macaca_nemestrina
ENSACLG00000009222	chd3	99	74.699	ENSMLEG00000032249	CHD3	91	78.816	Mandrillus_leucophaeus
ENSACLG00000009222	chd3	87	89.371	ENSMAMG00000000564	chd3	99	89.371	Mastacembelus_armatus
ENSACLG00000009222	chd3	99	73.927	ENSMAUG00000013873	Chd3	99	72.425	Mesocricetus_auratus
ENSACLG00000009222	chd3	99	73.560	ENSMICG00000008741	CHD3	90	80.386	Microcebus_murinus
ENSACLG00000009222	chd3	99	73.927	ENSMOCG00000004848	Chd3	98	73.979	Microtus_ochrogaster
ENSACLG00000009222	chd3	98	86.703	ENSMMOG00000012699	chd3	99	84.119	Mola_mola
ENSACLG00000009222	chd3	95	75.862	ENSMODG00000007509	CHD3	78	78.510	Monodelphis_domestica
ENSACLG00000009222	chd3	99	74.594	MGP_CAROLIEiJ_G0016564	Chd3	98	74.665	Mus_caroli
ENSACLG00000009222	chd3	99	74.425	ENSMUSG00000018474	Chd3	98	74.706	Mus_musculus
ENSACLG00000009222	chd3	99	74.673	MGP_PahariEiJ_G0017695	Chd3	98	74.799	Mus_pahari
ENSACLG00000009222	chd3	99	74.477	MGP_SPRETEiJ_G0017400	Chd3	98	74.759	Mus_spretus
ENSACLG00000009222	chd3	89	75.611	ENSMPUG00000008861	CHD3	92	79.808	Mustela_putorius_furo
ENSACLG00000009222	chd3	99	73.073	ENSMLUG00000014643	-	91	76.877	Myotis_lucifugus
ENSACLG00000009222	chd3	99	73.419	ENSNGAG00000000773	Chd3	90	80.707	Nannospalax_galili
ENSACLG00000009222	chd3	87	93.284	ENSNBRG00000000636	chd3	97	93.284	Neolamprologus_brichardi
ENSACLG00000009222	chd3	98	73.724	ENSNLEG00000009770	CHD3	98	71.964	Nomascus_leucogenys
ENSACLG00000009222	chd3	90	78.634	ENSMEUG00000005852	CHD3	84	80.906	Notamacropus_eugenii
ENSACLG00000009222	chd3	97	74.161	ENSOPRG00000011069	CHD3	94	77.743	Ochotona_princeps
ENSACLG00000009222	chd3	99	73.457	ENSODEG00000017785	CHD3	91	80.707	Octodon_degus
ENSACLG00000009222	chd3	98	94.291	ENSONIG00000009292	chd3	96	97.872	Oreochromis_niloticus
ENSACLG00000009222	chd3	99	69.764	ENSOCUG00000029299	CHD3	93	74.917	Oryctolagus_cuniculus
ENSACLG00000009222	chd3	92	86.136	ENSORLG00000007107	chd3	93	84.026	Oryzias_latipes
ENSACLG00000009222	chd3	90	90.301	ENSORLG00020008387	chd3	95	90.019	Oryzias_latipes_hni
ENSACLG00000009222	chd3	87	89.921	ENSOMEG00000013691	chd3	99	88.760	Oryzias_melastigma
ENSACLG00000009222	chd3	99	73.546	ENSOGAG00000003216	CHD3	92	80.707	Otolemur_garnettii
ENSACLG00000009222	chd3	99	72.548	ENSOARG00000017855	CHD3	91	76.027	Ovis_aries
ENSACLG00000009222	chd3	99	73.013	ENSPPAG00000032886	CHD3	94	77.370	Pan_paniscus
ENSACLG00000009222	chd3	99	74.620	ENSPPRG00000000626	CHD3	96	74.410	Panthera_pardus
ENSACLG00000009222	chd3	99	74.804	ENSPTRG00000008714	CHD3	94	78.816	Pan_troglodytes
ENSACLG00000009222	chd3	99	73.546	ENSPANG00000023938	CHD3	93	78.816	Papio_anubis
ENSACLG00000009222	chd3	88	95.817	ENSPKIG00000006305	chd3	99	83.426	Paramormyrops_kingsleyae
ENSACLG00000009222	chd3	75	83.539	ENSPSIG00000010177	CHD3	97	79.742	Pelodiscus_sinensis
ENSACLG00000009222	chd3	99	73.045	ENSPEMG00000014262	Chd3	92	77.177	Peromyscus_maniculatus_bairdii
ENSACLG00000009222	chd3	92	84.045	ENSPCIG00000005442	CHD3	87	91.414	Phascolarctos_cinereus
ENSACLG00000009222	chd3	98	88.924	ENSPFOG00000012464	chd3	86	96.099	Poecilia_formosa
ENSACLG00000009222	chd3	90	91.031	ENSPLAG00000002887	chd3	92	90.458	Poecilia_latipinna
ENSACLG00000009222	chd3	89	91.770	ENSPMEG00000016725	chd3	91	91.196	Poecilia_mexicana
ENSACLG00000009222	chd3	98	90.995	ENSPREG00000011044	chd3	97	90.439	Poecilia_reticulata
ENSACLG00000009222	chd3	99	71.664	ENSPPYG00000007940	CHD3	92	78.816	Pongo_abelii
ENSACLG00000009222	chd3	87	87.086	ENSPCAG00000004350	CHD3	88	84.000	Procavia_capensis
ENSACLG00000009222	chd3	99	74.817	ENSPCOG00000020952	CHD3	88	80.707	Propithecus_coquereli
ENSACLG00000009222	chd3	82	73.029	ENSPVAG00000016344	CHD3	75	83.182	Pteropus_vampyrus
ENSACLG00000009222	chd3	99	85.545	ENSPNAG00000020393	chd3	98	85.155	Pygocentrus_nattereri
ENSACLG00000009222	chd3	95	74.540	ENSRNOG00000009722	Chd3	93	79.936	Rattus_norvegicus
ENSACLG00000009222	chd3	99	72.831	ENSRBIG00000033562	CHD3	94	78.816	Rhinopithecus_bieti
ENSACLG00000009222	chd3	99	74.699	ENSRROG00000029554	CHD3	93	78.816	Rhinopithecus_roxellana
ENSACLG00000009222	chd3	99	74.856	ENSSBOG00000020719	CHD3	94	78.816	Saimiri_boliviensis_boliviensis
ENSACLG00000009222	chd3	99	74.921	ENSSHAG00000014412	CHD3	78	76.800	Sarcophilus_harrisii
ENSACLG00000009222	chd3	89	83.284	ENSSFOG00015023123	chd3	95	83.714	Scleropages_formosus
ENSACLG00000009222	chd3	95	90.170	ENSSMAG00000006451	chd3	93	95.570	Scophthalmus_maximus
ENSACLG00000009222	chd3	87	91.618	ENSSDUG00000005792	chd3	96	91.033	Seriola_dumerili
ENSACLG00000009222	chd3	98	91.460	ENSSPAG00000013694	chd3	99	90.625	Stegastes_partitus
ENSACLG00000009222	chd3	99	73.622	ENSSSCG00000021363	CHD3	86	89.697	Sus_scrofa
ENSACLG00000009222	chd3	93	87.159	ENSTRUG00000014990	chd3	89	88.283	Takifugu_rubripes
ENSACLG00000009222	chd3	99	85.828	ENSTNIG00000012998	chd3	98	85.113	Tetraodon_nigroviridis
ENSACLG00000009222	chd3	65	85.437	ENSTBEG00000011454	-	70	91.753	Tupaia_belangeri
ENSACLG00000009222	chd3	99	76.040	ENSTTRG00000010295	CHD3	88	81.675	Tursiops_truncatus
ENSACLG00000009222	chd3	95	73.847	ENSUAMG00000005475	CHD3	93	80.449	Ursus_americanus
ENSACLG00000009222	chd3	58	89.474	ENSVPAG00000010794	-	59	92.593	Vicugna_pacos
ENSACLG00000009222	chd3	97	74.694	ENSVVUG00000028011	CHD3	92	80.449	Vulpes_vulpes
ENSACLG00000009222	chd3	99	65.271	ENSXETG00000012991	chd3	85	76.358	Xenopus_tropicalis
ENSACLG00000009222	chd3	94	88.716	ENSXCOG00000000809	chd3	96	88.327	Xiphophorus_couchianus
ENSACLG00000009222	chd3	87	88.430	ENSXMAG00000016035	chd3	99	88.055	Xiphophorus_maculatus