EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009378 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 73895 bases
Position: chrLS419824.1:53697-127591
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000013714	MMR_HSR1	PF01926.23	2.5e-06	1	1
ENSACLP00000013735	MMR_HSR1	PF01926.23	2.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014070	-	1503	-	ENSACLP00000013735	500 (aa)	-	-
ENSACLT00000014048	-	1583	-	ENSACLP00000013714	500 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009378's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009378's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009378	-	97	93.047	ENSACLG00000027785	-	83	92.073
ENSACLG00000009378	-	97	56.660	ENSACLG00000027781	-	61	56.660
ENSACLG00000009378	-	96	57.884	ENSACLG00000027770	-	66	57.884
ENSACLG00000009378	-	96	57.000	ENSACLG00000027763	-	65	57.000
ENSACLG00000009378	-	96	58.266	ENSACLG00000027743	-	62	58.149
ENSACLG00000009378	-	86	53.653	ENSACLG00000027749	-	65	53.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009378	-	96	54.709	ENSAPEG00000007405	-	62	54.709	Amphiprion_percula
ENSACLG00000009378	-	96	55.311	ENSAPEG00000008962	-	62	55.311	Amphiprion_percula
ENSACLG00000009378	-	96	53.786	ENSAPEG00000007463	-	77	53.981	Amphiprion_percula
ENSACLG00000009378	-	87	56.512	ENSATEG00000024350	-	67	55.850	Anabas_testudineus
ENSACLG00000009378	-	82	39.121	ENSAMXG00000007315	-	60	38.767	Astyanax_mexicanus
ENSACLG00000009378	-	86	39.203	ENSAMXG00000035650	-	67	39.076	Astyanax_mexicanus
ENSACLG00000009378	-	96	44.752	ENSELUG00000016238	-	59	44.752	Esox_lucius
ENSACLG00000009378	-	84	45.287	ENSELUG00000016154	-	51	45.057	Esox_lucius
ENSACLG00000009378	-	86	44.227	ENSELUG00000016324	-	55	44.397	Esox_lucius
ENSACLG00000009378	-	96	51.468	ENSGACG00000011412	-	80	51.468	Gasterosteus_aculeatus
ENSACLG00000009378	-	92	46.278	ENSLBEG00000027088	-	72	46.465	Labrus_bergylta
ENSACLG00000009378	-	92	51.883	ENSLBEG00000025738	-	77	55.195	Labrus_bergylta
ENSACLG00000009378	-	81	33.559	ENSLOCG00000002868	-	63	33.333	Lepisosteus_oculatus
ENSACLG00000009378	-	71	57.453	ENSMAMG00000023343	-	62	57.600	Mastacembelus_armatus
ENSACLG00000009378	-	87	92.938	ENSMZEG00005026592	-	66	93.394	Maylandia_zebra
ENSACLG00000009378	-	96	56.338	ENSMZEG00005023434	-	59	56.338	Maylandia_zebra
ENSACLG00000009378	-	87	97.254	ENSMZEG00005023437	-	66	97.254	Maylandia_zebra
ENSACLG00000009378	-	96	56.800	ENSMZEG00005004230	-	60	56.800	Maylandia_zebra
ENSACLG00000009378	-	96	52.664	ENSMZEG00005023384	-	59	52.459	Maylandia_zebra
ENSACLG00000009378	-	96	58.669	ENSMZEG00005023374	-	66	58.551	Maylandia_zebra
ENSACLG00000009378	-	97	96.296	ENSMZEG00005004202	-	68	96.296	Maylandia_zebra
ENSACLG00000009378	-	96	76.907	ENSONIG00000005156	-	72	75.688	Oreochromis_niloticus
ENSACLG00000009378	-	80	51.270	ENSONIG00000015367	-	70	51.270	Oreochromis_niloticus
ENSACLG00000009378	-	80	50.465	ENSONIG00000012332	-	70	50.465	Oreochromis_niloticus
ENSACLG00000009378	-	87	80.942	ENSONIG00000017112	-	73	80.728	Oreochromis_niloticus
ENSACLG00000009378	-	96	51.613	ENSPFOG00000006073	-	61	51.613	Poecilia_formosa
ENSACLG00000009378	-	96	51.186	ENSPLAG00000016480	-	62	51.186	Poecilia_latipinna
ENSACLG00000009378	-	81	53.147	ENSPMEG00000014636	-	66	51.981	Poecilia_mexicana
ENSACLG00000009378	-	96	54.819	ENSPREG00000009634	-	78	55.020	Poecilia_reticulata
ENSACLG00000009378	-	90	56.716	ENSPREG00000007347	-	82	56.930	Poecilia_reticulata
ENSACLG00000009378	-	96	57.600	ENSPNYG00000002532	-	65	57.400	Pundamilia_nyererei
ENSACLG00000009378	-	90	36.273	ENSPNAG00000003204	-	66	36.273	Pygocentrus_nattereri
ENSACLG00000009378	-	70	34.884	ENSRBIG00000043902	NUGGC	50	34.884	Rhinopithecus_bieti
ENSACLG00000009378	-	67	48.214	ENSSBOG00000028930	NUGGC	50	34.884	Saimiri_boliviensis_boliviensis
ENSACLG00000009378	-	91	34.186	ENSSFOG00015023994	-	58	33.821	Scleropages_formosus
ENSACLG00000009378	-	96	55.227	ENSSMAG00000015947	nuggc.3	61	55.030	Scophthalmus_maximus
ENSACLG00000009378	-	96	56.098	ENSSDUG00000010293	-	85	55.993	Seriola_dumerili
ENSACLG00000009378	-	96	50.000	ENSSPAG00000013498	-	70	50.000	Stegastes_partitus
ENSACLG00000009378	-	96	56.031	ENSSPAG00000014020	-	66	56.031	Stegastes_partitus