EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009390 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 1308 bases
Position: chr3:51138177-51139484
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000013730	RVT_1	PF00078.27	7.5e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014065	-	1308	-	ENSACLP00000013730	371 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009390's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009390's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009390	-	80	30.201	ENSACLG00000021701	-	68	31.522
ENSACLG00000009390	-	75	32.258	ENSACLG00000013847	-	63	32.246
ENSACLG00000009390	-	65	31.020	ENSACLG00000013289	-	72	31.020
ENSACLG00000009390	-	91	34.018	ENSACLG00000001380	-	50	34.228
ENSACLG00000009390	-	71	34.586	ENSACLG00000002678	-	62	33.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009390	-	77	50.352	ENSAPOG00000011439	-	83	50.185	Acanthochromis_polyacanthus
ENSACLG00000009390	-	82	42.295	ENSCPBG00000005584	-	63	41.924	Chrysemys_picta_bellii
ENSACLG00000009390	-	78	45.734	ENSEBUG00000005844	-	58	47.566	Eptatretus_burgeri
ENSACLG00000009390	-	57	37.559	ENSEBUG00000007520	-	83	37.089	Eptatretus_burgeri
ENSACLG00000009390	-	76	44.484	ENSIPUG00000002895	-	65	43.985	Ictalurus_punctatus
ENSACLG00000009390	-	61	36.444	ENSLACG00000011328	-	97	36.000	Latimeria_chalumnae
ENSACLG00000009390	-	82	35.065	ENSLACG00000005365	-	63	36.268	Latimeria_chalumnae
ENSACLG00000009390	-	62	36.437	ENSLACG00000005904	-	78	37.727	Latimeria_chalumnae
ENSACLG00000009390	-	68	48.413	ENSORLG00000028614	-	62	51.327	Oryzias_latipes
ENSACLG00000009390	-	53	51.020	ENSORLG00020022076	-	52	50.000	Oryzias_latipes_hni
ENSACLG00000009390	-	61	48.899	ENSORLG00015020536	-	56	50.718	Oryzias_latipes_hsok
ENSACLG00000009390	-	67	46.400	ENSPSIG00000000968	-	80	45.600	Pelodiscus_sinensis
ENSACLG00000009390	-	81	41.806	ENSPFOG00000023854	-	63	42.199	Poecilia_formosa
ENSACLG00000009390	-	70	35.385	ENSPNYG00000002366	-	81	35.000	Pundamilia_nyererei
ENSACLG00000009390	-	99	86.339	ENSXMAG00000024510	-	99	85.246	Xiphophorus_maculatus