EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009423 (Gene tree)
Gene ID: 113019656
Gene Symbol: -
Alias: -
Full Name: serrate RNA effector molecule homolog
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11720 bases
Position: chr3:51189198-51200917
Accession: 113019656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000013782	ARS2	PF04959.13	2.2e-82	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014116	-	4196	-	ENSACLP00000013782	870 (aa)	XP_026019217	UPI000E428164

Gene Model

Click here to download ENSACLG00000009423's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009423's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009423	-	52	65.435	ENSACLG00000013156	srrt	50	65.451

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009423	-	52	64.592	ENSG00000087087	SRRT	98	67.391	Homo_sapiens
ENSACLG00000009423	-	52	66.087	ENSAPOG00000002304	srrt	52	66.738	Acanthochromis_polyacanthus
ENSACLG00000009423	-	94	54.717	ENSAMEG00000014506	SRRT	53	61.777	Ailuropoda_melanoleuca
ENSACLG00000009423	-	76	65.652	ENSACIG00000015795	srrt	83	65.106	Amphilophus_citrinellus
ENSACLG00000009423	-	78	65.870	ENSAOCG00000009693	srrt	81	65.532	Amphiprion_ocellaris
ENSACLG00000009423	-	93	86.453	ENSAOCG00000009189	-	93	85.961	Amphiprion_ocellaris
ENSACLG00000009423	-	76	65.801	ENSAPEG00000003646	srrt	82	65.106	Amphiprion_percula
ENSACLG00000009423	-	93	86.453	ENSAPEG00000020016	-	93	85.961	Amphiprion_percula
ENSACLG00000009423	-	59	91.279	ENSATEG00000003652	-	95	91.716	Anabas_testudineus
ENSACLG00000009423	-	78	65.000	ENSATEG00000014425	srrt	81	64.894	Anabas_testudineus
ENSACLG00000009423	-	53	63.057	ENSACAG00000001014	SRRT	54	61.814	Anolis_carolinensis
ENSACLG00000009423	-	52	63.636	ENSANAG00000031718	SRRT	56	61.212	Aotus_nancymaae
ENSACLG00000009423	-	52	63.848	ENSBTAG00000001134	SRRT	55	61.414	Bos_taurus
ENSACLG00000009423	-	59	41.163	WBGene00017085	E01A2.2	85	39.381	Caenorhabditis_elegans
ENSACLG00000009423	-	52	63.848	ENSCJAG00000014917	SRRT	56	61.414	Callithrix_jacchus
ENSACLG00000009423	-	96	55.568	ENSCAFG00000023538	SRRT	93	51.773	Canis_familiaris
ENSACLG00000009423	-	96	55.530	ENSCAFG00020013358	SRRT	97	50.539	Canis_lupus_dingo
ENSACLG00000009423	-	52	63.636	ENSCHIG00000010495	SRRT	56	61.100	Capra_hircus
ENSACLG00000009423	-	52	63.404	ENSTSYG00000036426	SRRT	96	52.524	Carlito_syrichta
ENSACLG00000009423	-	52	64.795	ENSCAPG00000013586	SRRT	94	57.800	Cavia_aperea
ENSACLG00000009423	-	52	63.713	ENSCPOG00000001739	SRRT	93	52.774	Cavia_porcellus
ENSACLG00000009423	-	52	63.636	ENSCCAG00000015877	SRRT	56	61.212	Cebus_capucinus
ENSACLG00000009423	-	52	63.636	ENSCATG00000036306	SRRT	56	61.212	Cercocebus_atys
ENSACLG00000009423	-	96	53.846	ENSCLAG00000007568	SRRT	94	57.344	Chinchilla_lanigera
ENSACLG00000009423	-	52	63.636	ENSCSAG00000017996	SRRT	55	61.212	Chlorocebus_sabaeus
ENSACLG00000009423	-	52	60.544	ENSCHOG00000007815	SRRT	64	63.235	Choloepus_hoffmanni
ENSACLG00000009423	-	68	60.185	ENSCPBG00000011553	SRRT	75	58.252	Chrysemys_picta_bellii
ENSACLG00000009423	-	100	38.706	ENSCSAVG00000008394	-	77	52.450	Ciona_savignyi
ENSACLG00000009423	-	52	63.617	ENSCANG00000034556	SRRT	55	60.896	Colobus_angolensis_palliatus
ENSACLG00000009423	-	96	55.670	ENSCGRG00001001594	Srrt	93	52.830	Cricetulus_griseus_chok1gshd
ENSACLG00000009423	-	96	51.484	ENSCGRG00000007292	Srrt	94	57.485	Cricetulus_griseus_crigri
ENSACLG00000009423	-	96	52.982	ENSCSEG00000017878	srrt	50	59.785	Cynoglossus_semilaevis
ENSACLG00000009423	-	82	91.262	ENSCSEG00000005233	-	85	91.262	Cynoglossus_semilaevis
ENSACLG00000009423	-	94	56.738	ENSCVAG00000019848	srrt	93	57.194	Cyprinodon_variegatus
ENSACLG00000009423	-	90	78.272	ENSCVAG00000017344	-	91	77.143	Cyprinodon_variegatus
ENSACLG00000009423	-	94	56.694	ENSDARG00000017762	srrt	52	65.199	Danio_rerio
ENSACLG00000009423	-	52	63.636	ENSDNOG00000003851	SRRT	93	52.246	Dasypus_novemcinctus
ENSACLG00000009423	-	96	55.683	ENSDORG00000005584	Srrt	94	58.333	Dipodomys_ordii
ENSACLG00000009423	-	74	51.463	FBgn0033062	Ars2	59	49.787	Drosophila_melanogaster
ENSACLG00000009423	-	73	61.331	ENSETEG00000016175	SRRT	70	59.557	Echinops_telfairi
ENSACLG00000009423	-	68	59.329	ENSEBUG00000008517	-	77	58.861	Eptatretus_burgeri
ENSACLG00000009423	-	96	55.314	ENSEASG00005016956	SRRT	93	52.837	Equus_asinus_asinus
ENSACLG00000009423	-	96	55.314	ENSECAG00000012292	SRRT	93	52.837	Equus_caballus
ENSACLG00000009423	-	83	60.714	ENSEEUG00000009117	SRRT	70	58.754	Erinaceus_europaeus
ENSACLG00000009423	-	93	67.769	ENSELUG00000021216	-	93	65.768	Esox_lucius
ENSACLG00000009423	-	96	55.454	ENSFCAG00000006855	SRRT	93	52.128	Felis_catus
ENSACLG00000009423	-	52	61.171	ENSFDAG00000021347	SRRT	93	55.602	Fukomys_damarensis
ENSACLG00000009423	-	73	66.256	ENSFHEG00000002756	srrt	82	66.667	Fundulus_heteroclitus
ENSACLG00000009423	-	53	77.730	ENSFHEG00000004105	-	96	77.516	Fundulus_heteroclitus
ENSACLG00000009423	-	96	52.661	ENSGMOG00000018619	srrt	52	61.489	Gadus_morhua
ENSACLG00000009423	-	95	63.927	ENSGMOG00000018694	-	94	62.945	Gadus_morhua
ENSACLG00000009423	-	52	66.304	ENSGAFG00000005423	srrt	53	65.474	Gambusia_affinis
ENSACLG00000009423	-	98	76.471	ENSGAFG00000020383	-	93	75.832	Gambusia_affinis
ENSACLG00000009423	-	93	73.561	ENSGACG00000001100	-	93	74.643	Gasterosteus_aculeatus
ENSACLG00000009423	-	52	63.636	ENSGGOG00000001508	SRRT	93	52.019	Gorilla_gorilla
ENSACLG00000009423	-	52	65.435	ENSHBUG00000002942	srrt	50	65.451	Haplochromis_burtoni
ENSACLG00000009423	-	96	54.857	ENSHGLG00000008344	Srrt	94	57.143	Heterocephalus_glaber_female
ENSACLG00000009423	-	96	55.351	ENSHGLG00100018857	Srrt	94	57.841	Heterocephalus_glaber_male
ENSACLG00000009423	-	98	54.784	ENSHCOG00000005403	srrt	93	52.210	Hippocampus_comes
ENSACLG00000009423	-	98	72.471	ENSHCOG00000008904	-	97	71.294	Hippocampus_comes
ENSACLG00000009423	-	52	65.659	ENSIPUG00000021150	srrt	53	65.895	Ictalurus_punctatus
ENSACLG00000009423	-	52	63.617	ENSSTOG00000013776	SRRT	93	52.019	Ictidomys_tridecemlineatus
ENSACLG00000009423	-	96	56.547	ENSJJAG00000010446	Srrt	93	58.452	Jaculus_jaculus
ENSACLG00000009423	-	93	81.166	ENSKMAG00000008468	-	93	80.923	Kryptolebias_marmoratus
ENSACLG00000009423	-	79	64.632	ENSKMAG00000013599	srrt	93	55.596	Kryptolebias_marmoratus
ENSACLG00000009423	-	79	65.591	ENSLBEG00000016308	srrt	79	65.263	Labrus_bergylta
ENSACLG00000009423	-	66	78.073	ENSLBEG00000028983	-	97	76.527	Labrus_bergylta
ENSACLG00000009423	-	94	47.281	ENSLACG00000001089	SRRT	76	60.194	Latimeria_chalumnae
ENSACLG00000009423	-	70	68.125	ENSLOCG00000013658	srrt	53	56.223	Lepisosteus_oculatus
ENSACLG00000009423	-	52	63.636	ENSLAFG00000007725	SRRT	93	52.257	Loxodonta_africana
ENSACLG00000009423	-	52	63.617	ENSMFAG00000033745	SRRT	58	60.040	Macaca_fascicularis
ENSACLG00000009423	-	96	55.341	ENSMMUG00000021255	SRRT	93	52.459	Macaca_mulatta
ENSACLG00000009423	-	52	63.636	ENSMNEG00000041864	SRRT	56	61.212	Macaca_nemestrina
ENSACLG00000009423	-	52	63.617	ENSMLEG00000029479	SRRT	57	60.040	Mandrillus_leucophaeus
ENSACLG00000009423	-	52	65.217	ENSMAMG00000014311	srrt	93	56.659	Mastacembelus_armatus
ENSACLG00000009423	-	98	88.028	ENSMAMG00000010681	-	93	86.470	Mastacembelus_armatus
ENSACLG00000009423	-	100	99.770	ENSMZEG00005028002	-	100	99.770	Maylandia_zebra
ENSACLG00000009423	-	52	65.435	ENSMZEG00005016135	srrt	50	65.451	Maylandia_zebra
ENSACLG00000009423	-	96	55.530	ENSMAUG00000011386	Srrt	94	58.200	Mesocricetus_auratus
ENSACLG00000009423	-	52	63.848	ENSMICG00000009471	SRRT	95	51.874	Microcebus_murinus
ENSACLG00000009423	-	96	56.142	ENSMOCG00000001971	Srrt	94	58.384	Microtus_ochrogaster
ENSACLG00000009423	-	95	56.557	ENSMMOG00000016399	srrt	80	64.346	Mola_mola
ENSACLG00000009423	-	84	77.915	ENSMMOG00000011137	-	88	75.918	Mola_mola
ENSACLG00000009423	-	52	62.316	ENSMODG00000004862	SRRT	94	59.524	Monodelphis_domestica
ENSACLG00000009423	-	88	54.078	ENSMALG00000018604	srrt	55	60.879	Monopterus_albus
ENSACLG00000009423	-	66	62.667	ENSMALG00000005567	-	87	68.172	Monopterus_albus
ENSACLG00000009423	-	96	56.366	MGP_CAROLIEiJ_G0027870	Srrt	94	58.788	Mus_caroli
ENSACLG00000009423	-	96	56.366	ENSMUSG00000037364	Srrt	94	58.788	Mus_musculus
ENSACLG00000009423	-	52	64.378	MGP_PahariEiJ_G0024456	Srrt	94	58.990	Mus_pahari
ENSACLG00000009423	-	96	56.366	MGP_SPRETEiJ_G0028875	Srrt	94	58.788	Mus_spretus
ENSACLG00000009423	-	96	55.798	ENSMPUG00000015839	SRRT	93	52.009	Mustela_putorius_furo
ENSACLG00000009423	-	52	63.425	ENSMLUG00000009975	SRRT	93	52.768	Myotis_lucifugus
ENSACLG00000009423	-	96	54.091	ENSNGAG00000023715	Srrt	67	61.212	Nannospalax_galili
ENSACLG00000009423	-	52	65.152	ENSNBRG00000019100	srrt	52	64.516	Neolamprologus_brichardi
ENSACLG00000009423	-	95	49.243	ENSNLEG00000011987	SRRT	55	56.144	Nomascus_leucogenys
ENSACLG00000009423	-	94	46.588	ENSMEUG00000011941	SRRT	54	50.303	Notamacropus_eugenii
ENSACLG00000009423	-	61	59.701	ENSOPRG00000002502	-	67	57.857	Ochotona_princeps
ENSACLG00000009423	-	52	64.579	ENSODEG00000016856	SRRT	93	57.841	Octodon_degus
ENSACLG00000009423	-	100	96.583	ENSONIG00000016080	-	100	96.583	Oreochromis_niloticus
ENSACLG00000009423	-	52	65.435	ENSONIG00000004242	srrt	52	64.211	Oreochromis_niloticus
ENSACLG00000009423	-	96	55.465	ENSORLG00000008120	srrt	53	65.190	Oryzias_latipes
ENSACLG00000009423	-	96	55.822	ENSORLG00020003058	srrt	53	64.979	Oryzias_latipes_hni
ENSACLG00000009423	-	96	55.936	ENSORLG00015008062	srrt	53	65.190	Oryzias_latipes_hsok
ENSACLG00000009423	-	98	79.176	ENSOMEG00000006963	-	93	78.175	Oryzias_melastigma
ENSACLG00000009423	-	96	56.517	ENSOMEG00000003155	srrt	83	65.245	Oryzias_melastigma
ENSACLG00000009423	-	52	63.636	ENSOGAG00000017242	SRRT	93	52.364	Otolemur_garnettii
ENSACLG00000009423	-	52	63.617	ENSOARG00000015645	SRRT	56	60.159	Ovis_aries
ENSACLG00000009423	-	52	63.617	ENSPPAG00000041090	SRRT	55	60.896	Pan_paniscus
ENSACLG00000009423	-	96	55.196	ENSPPRG00000009557	SRRT	93	52.438	Panthera_pardus
ENSACLG00000009423	-	96	55.568	ENSPTIG00000014355	SRRT	93	52.246	Panthera_tigris_altaica
ENSACLG00000009423	-	52	63.617	ENSPTRG00000019511	SRRT	59	58.250	Pan_troglodytes
ENSACLG00000009423	-	52	62.578	ENSPANG00000020763	SRRT	57	60.040	Papio_anubis
ENSACLG00000009423	-	96	56.562	ENSPKIG00000005434	srrt	79	65.401	Paramormyrops_kingsleyae
ENSACLG00000009423	-	94	56.991	ENSPKIG00000022212	-	54	66.176	Paramormyrops_kingsleyae
ENSACLG00000009423	-	78	63.734	ENSPMGG00000002841	srrt	82	63.445	Periophthalmus_magnuspinnatus
ENSACLG00000009423	-	52	64.363	ENSPEMG00000010834	Srrt	93	58.045	Peromyscus_maniculatus_bairdii
ENSACLG00000009423	-	96	50.457	ENSPMAG00000009614	-	80	57.464	Petromyzon_marinus
ENSACLG00000009423	-	52	62.605	ENSPCIG00000000816	SRRT	55	61.134	Phascolarctos_cinereus
ENSACLG00000009423	-	52	66.739	ENSPFOG00000005704	srrt	93	57.297	Poecilia_formosa
ENSACLG00000009423	-	98	76.146	ENSPFOG00000016554	-	93	75.799	Poecilia_formosa
ENSACLG00000009423	-	98	75.704	ENSPLAG00000004526	-	93	75.154	Poecilia_latipinna
ENSACLG00000009423	-	94	57.143	ENSPLAG00000021992	srrt	51	65.665	Poecilia_latipinna
ENSACLG00000009423	-	77	65.659	ENSPMEG00000001182	srrt	93	57.057	Poecilia_mexicana
ENSACLG00000009423	-	95	75.483	ENSPMEG00000001520	-	90	75.389	Poecilia_mexicana
ENSACLG00000009423	-	94	57.396	ENSPREG00000022308	srrt	93	57.416	Poecilia_reticulata
ENSACLG00000009423	-	52	63.636	ENSPCOG00000025751	SRRT	93	52.246	Propithecus_coquereli
ENSACLG00000009423	-	60	61.111	ENSPVAG00000000834	SRRT	82	61.644	Pteropus_vampyrus
ENSACLG00000009423	-	52	65.435	ENSPNYG00000018710	srrt	52	65.451	Pundamilia_nyererei
ENSACLG00000009423	-	72	61.635	ENSPNAG00000010629	srrt	68	56.716	Pygocentrus_nattereri
ENSACLG00000009423	-	52	54.487	ENSRNOG00000048277	AABR07035787.1	97	52.653	Rattus_norvegicus
ENSACLG00000009423	-	52	63.636	ENSRBIG00000035718	SRRT	57	60.040	Rhinopithecus_bieti
ENSACLG00000009423	-	52	63.636	ENSRROG00000030622	SRRT	57	60.040	Rhinopithecus_roxellana
ENSACLG00000009423	-	52	63.636	ENSSBOG00000033570	SRRT	56	61.212	Saimiri_boliviensis_boliviensis
ENSACLG00000009423	-	72	52.402	ENSSHAG00000007349	-	77	61.089	Sarcophilus_harrisii
ENSACLG00000009423	-	94	57.751	ENSSFOG00015017293	srrt	52	67.505	Scleropages_formosus
ENSACLG00000009423	-	59	75.717	ENSSMAG00000018195	-	93	70.838	Scophthalmus_maximus
ENSACLG00000009423	-	89	66.523	ENSSMAG00000015342	srrt	92	65.458	Scophthalmus_maximus
ENSACLG00000009423	-	76	66.359	ENSSDUG00000012049	srrt	88	57.228	Seriola_dumerili
ENSACLG00000009423	-	53	73.305	ENSSDUG00000002051	-	96	72.131	Seriola_dumerili
ENSACLG00000009423	-	76	66.667	ENSSLDG00000017477	srrt	79	65.880	Seriola_lalandi_dorsalis
ENSACLG00000009423	-	52	65.443	ENSSPAG00000005665	srrt	51	65.672	Stegastes_partitus
ENSACLG00000009423	-	86	84.676	ENSSPAG00000018943	-	96	80.810	Stegastes_partitus
ENSACLG00000009423	-	90	76.747	ENSTRUG00000000023	-	91	75.476	Takifugu_rubripes
ENSACLG00000009423	-	96	56.092	ENSTRUG00000016075	srrt	53	63.522	Takifugu_rubripes
ENSACLG00000009423	-	93	73.438	ENSTNIG00000003111	-	93	72.282	Tetraodon_nigroviridis
ENSACLG00000009423	-	75	51.542	ENSTNIG00000011779	srrt	72	63.789	Tetraodon_nigroviridis
ENSACLG00000009423	-	52	63.636	ENSTTRG00000011104	SRRT	93	52.246	Tursiops_truncatus
ENSACLG00000009423	-	96	55.415	ENSUAMG00000027997	SRRT	57	61.212	Ursus_americanus
ENSACLG00000009423	-	96	55.454	ENSUMAG00000011295	SRRT	93	52.128	Ursus_maritimus
ENSACLG00000009423	-	96	55.568	ENSVVUG00000023572	SRRT	93	51.773	Vulpes_vulpes
ENSACLG00000009423	-	78	60.000	ENSXETG00000025124	srrt	75	59.205	Xenopus_tropicalis
ENSACLG00000009423	-	53	69.197	ENSXCOG00000013105	-	93	69.414	Xiphophorus_couchianus
ENSACLG00000009423	-	98	76.824	ENSXMAG00000002090	-	93	76.572	Xiphophorus_maculatus
ENSACLG00000009423	-	96	57.523	ENSXMAG00000007627	srrt	83	65.254	Xiphophorus_maculatus