EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009613 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 2425 bases
Position: chr18:24113166-24115590
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014077	RRM_1	PF00076.22	2.3e-26	1	3
ENSACLP00000014077	RRM_1	PF00076.22	2.3e-26	2	3
ENSACLP00000014077	RRM_1	PF00076.22	2.3e-26	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014419	-	1068	-	ENSACLP00000014077	355 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009613's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009613's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009613	-	73	35.505	ENSACLG00000026031	ncl	87	35.938

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009613	-	96	66.092	ENSACIG00000021941	-	89	66.092	Amphilophus_citrinellus
ENSACLG00000009613	-	94	45.547	ENSCSEG00000017388	-	74	42.994	Cynoglossus_semilaevis
ENSACLG00000009613	-	97	47.317	ENSFHEG00000017265	-	88	47.317	Fundulus_heteroclitus
ENSACLG00000009613	-	92	39.402	ENSGMOG00000017831	-	97	40.217	Gadus_morhua
ENSACLG00000009613	-	95	43.765	ENSGAFG00000018408	-	83	43.765	Gambusia_affinis
ENSACLG00000009613	-	100	97.465	ENSHBUG00000006683	-	100	97.465	Haplochromis_burtoni
ENSACLG00000009613	-	93	42.677	ENSHCOG00000020361	-	92	42.677	Hippocampus_comes
ENSACLG00000009613	-	93	50.000	ENSKMAG00000003154	-	84	50.000	Kryptolebias_marmoratus
ENSACLG00000009613	-	100	98.592	ENSMZEG00005005300	-	100	98.592	Maylandia_zebra
ENSACLG00000009613	-	94	52.011	ENSMMOG00000018095	-	90	52.022	Mola_mola
ENSACLG00000009613	-	91	53.869	ENSMALG00000006207	-	71	52.825	Monopterus_albus
ENSACLG00000009613	-	97	42.971	ENSPMGG00000013705	-	96	44.297	Periophthalmus_magnuspinnatus
ENSACLG00000009613	-	90	48.767	ENSPFOG00000016767	-	89	47.692	Poecilia_formosa
ENSACLG00000009613	-	95	45.122	ENSPLAG00000000597	-	82	45.122	Poecilia_latipinna
ENSACLG00000009613	-	95	44.634	ENSPMEG00000004046	-	83	44.634	Poecilia_mexicana
ENSACLG00000009613	-	91	46.134	ENSPREG00000007170	-	82	46.173	Poecilia_reticulata
ENSACLG00000009613	-	100	94.278	ENSPNYG00000000391	-	100	94.278	Pundamilia_nyererei
ENSACLG00000009613	-	90	46.277	ENSTRUG00000023880	-	78	45.910	Takifugu_rubripes
ENSACLG00000009613	-	95	44.499	ENSXMAG00000004403	-	83	44.499	Xiphophorus_maculatus