EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009709 (Gene tree)
Gene ID: 113018803
Gene Symbol: si:ch211-212k18.5
Alias: fb25b09|wu:fb25b09
Full Name: spalt like transcription factor 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 6457 bases
Position: chr3:19219250-19225706
Accession: 113018803
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014238	zf-C2H2	PF00096.26	1.5e-18	1	2
ENSACLP00000014238	zf-C2H2	PF00096.26	1.5e-18	2	2
ENSACLP00000014246	zf-C2H2	PF00096.26	2.6e-16	1	1
ENSACLP00000014238	zf-met	PF12874.7	9.1e-11	1	2
ENSACLP00000014238	zf-met	PF12874.7	9.1e-11	2	2
ENSACLP00000014246	zf-met	PF12874.7	2.9e-10	1	2
ENSACLP00000014246	zf-met	PF12874.7	2.9e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014590	-	3408	-	ENSACLP00000014246	1135 (aa)	-	-
ENSACLT00000014581	-	4706	XM_026162191	ENSACLP00000014238	1196 (aa)	XP_026017976	UPI000E42A203

Gene Model

Click here to download ENSACLG00000009709's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009709's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009709	si:ch211-212k18.5	62	47.815	ENSACLG00000019867	sall2	69	46.863

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009709	si:ch211-212k18.5	79	46.100	ENSAPOG00000015347	sall2	74	45.427	Acanthochromis_polyacanthus
ENSACLG00000009709	si:ch211-212k18.5	100	79.464	ENSAPOG00000013387	si:ch211-212k18.5	100	79.221	Acanthochromis_polyacanthus
ENSACLG00000009709	si:ch211-212k18.5	80	90.432	ENSACIG00000019922	si:ch211-212k18.5	99	90.422	Amphilophus_citrinellus
ENSACLG00000009709	si:ch211-212k18.5	100	76.480	ENSAOCG00000010737	si:ch211-212k18.5	100	77.453	Amphiprion_ocellaris
ENSACLG00000009709	si:ch211-212k18.5	78	46.680	ENSAOCG00000016559	sall2	73	45.657	Amphiprion_ocellaris
ENSACLG00000009709	si:ch211-212k18.5	54	48.886	ENSAPEG00000020215	sall2	87	48.323	Amphiprion_percula
ENSACLG00000009709	si:ch211-212k18.5	100	76.237	ENSAPEG00000006751	si:ch211-212k18.5	100	77.129	Amphiprion_percula
ENSACLG00000009709	si:ch211-212k18.5	81	81.705	ENSATEG00000001254	si:ch211-212k18.5	100	82.045	Anabas_testudineus
ENSACLG00000009709	si:ch211-212k18.5	54	51.232	ENSATEG00000007303	sall2	67	46.684	Anabas_testudineus
ENSACLG00000009709	si:ch211-212k18.5	99	53.940	ENSAMXG00000010979	si:ch211-212k18.5	99	54.079	Astyanax_mexicanus
ENSACLG00000009709	si:ch211-212k18.5	66	50.358	ENSAMXG00000020956	sall2	61	60.870	Astyanax_mexicanus
ENSACLG00000009709	si:ch211-212k18.5	99	70.283	ENSCSEG00000004426	si:ch211-212k18.5	99	70.364	Cynoglossus_semilaevis
ENSACLG00000009709	si:ch211-212k18.5	58	44.704	ENSCSEG00000021148	sall2	52	60.345	Cynoglossus_semilaevis
ENSACLG00000009709	si:ch211-212k18.5	99	71.593	ENSCVAG00000007475	si:ch211-212k18.5	99	71.440	Cyprinodon_variegatus
ENSACLG00000009709	si:ch211-212k18.5	62	48.433	ENSCVAG00000006032	sall2	67	45.108	Cyprinodon_variegatus
ENSACLG00000009709	si:ch211-212k18.5	95	57.105	ENSDARG00000103316	si:ch211-212k18.5	94	56.426	Danio_rerio
ENSACLG00000009709	si:ch211-212k18.5	77	46.605	ENSDARG00000075116	sall2	69	55.556	Danio_rerio
ENSACLG00000009709	si:ch211-212k18.5	85	49.308	ENSELUG00000004389	sall2	72	51.931	Esox_lucius
ENSACLG00000009709	si:ch211-212k18.5	99	58.373	ENSELUG00000024534	si:ch211-212k18.5	99	58.240	Esox_lucius
ENSACLG00000009709	si:ch211-212k18.5	59	58.000	ENSFHEG00000017550	sall2	67	47.097	Fundulus_heteroclitus
ENSACLG00000009709	si:ch211-212k18.5	99	72.386	ENSFHEG00000017264	si:ch211-212k18.5	99	72.765	Fundulus_heteroclitus
ENSACLG00000009709	si:ch211-212k18.5	99	72.281	ENSGAFG00000003746	si:ch211-212k18.5	99	72.003	Gambusia_affinis
ENSACLG00000009709	si:ch211-212k18.5	58	56.863	ENSGAFG00000015194	sall2	60	48.031	Gambusia_affinis
ENSACLG00000009709	si:ch211-212k18.5	100	99.559	ENSHBUG00000019672	si:ch211-212k18.5	100	99.559	Haplochromis_burtoni
ENSACLG00000009709	si:ch211-212k18.5	78	44.444	ENSHBUG00000002882	sall2	74	44.817	Haplochromis_burtoni
ENSACLG00000009709	si:ch211-212k18.5	97	62.415	ENSHCOG00000002842	si:ch211-212k18.5	99	60.947	Hippocampus_comes
ENSACLG00000009709	si:ch211-212k18.5	99	52.236	ENSIPUG00000002559	sall2	99	50.778	Ictalurus_punctatus
ENSACLG00000009709	si:ch211-212k18.5	64	47.152	ENSKMAG00000020172	sall2	67	45.912	Kryptolebias_marmoratus
ENSACLG00000009709	si:ch211-212k18.5	99	73.431	ENSKMAG00000019657	si:ch211-212k18.5	99	72.624	Kryptolebias_marmoratus
ENSACLG00000009709	si:ch211-212k18.5	100	72.794	ENSLBEG00000020887	si:ch211-212k18.5	100	71.903	Labrus_bergylta
ENSACLG00000009709	si:ch211-212k18.5	71	85.332	ENSMAMG00000015887	si:ch211-212k18.5	99	84.615	Mastacembelus_armatus
ENSACLG00000009709	si:ch211-212k18.5	67	47.321	ENSMAMG00000016229	sall2	54	50.588	Mastacembelus_armatus
ENSACLG00000009709	si:ch211-212k18.5	78	44.400	ENSMZEG00005012103	sall2	74	44.817	Maylandia_zebra
ENSACLG00000009709	si:ch211-212k18.5	100	99.912	ENSMZEG00005021214	si:ch211-212k18.5	100	99.912	Maylandia_zebra
ENSACLG00000009709	si:ch211-212k18.5	92	81.818	ENSMMOG00000012726	si:ch211-212k18.5	100	81.257	Mola_mola
ENSACLG00000009709	si:ch211-212k18.5	92	77.071	ENSMALG00000000979	si:ch211-212k18.5	97	75.411	Monopterus_albus
ENSACLG00000009709	si:ch211-212k18.5	70	46.420	ENSNBRG00000017645	sall2	76	46.412	Neolamprologus_brichardi
ENSACLG00000009709	si:ch211-212k18.5	98	94.449	ENSNBRG00000023948	si:ch211-212k18.5	99	93.655	Neolamprologus_brichardi
ENSACLG00000009709	si:ch211-212k18.5	99	70.968	ENSORLG00000030429	si:ch211-212k18.5	99	69.925	Oryzias_latipes
ENSACLG00000009709	si:ch211-212k18.5	99	70.885	ENSORLG00020008145	si:ch211-212k18.5	99	70.141	Oryzias_latipes_hni
ENSACLG00000009709	si:ch211-212k18.5	99	70.637	ENSORLG00015004982	si:ch211-212k18.5	99	69.843	Oryzias_latipes_hsok
ENSACLG00000009709	si:ch211-212k18.5	100	69.551	ENSOMEG00000013949	si:ch211-212k18.5	100	67.718	Oryzias_melastigma
ENSACLG00000009709	si:ch211-212k18.5	76	63.830	ENSPKIG00000009207	sall2	71	66.667	Paramormyrops_kingsleyae
ENSACLG00000009709	si:ch211-212k18.5	94	67.668	ENSPMGG00000018714	si:ch211-212k18.5	99	65.669	Periophthalmus_magnuspinnatus
ENSACLG00000009709	si:ch211-212k18.5	99	72.848	ENSPFOG00000023705	si:ch211-212k18.5	99	72.838	Poecilia_formosa
ENSACLG00000009709	si:ch211-212k18.5	58	59.184	ENSPFOG00000016504	sall2	62	48.033	Poecilia_formosa
ENSACLG00000009709	si:ch211-212k18.5	99	72.795	ENSPLAG00000002577	si:ch211-212k18.5	99	72.496	Poecilia_latipinna
ENSACLG00000009709	si:ch211-212k18.5	58	59.184	ENSPLAG00000018320	sall2	60	47.979	Poecilia_latipinna
ENSACLG00000009709	si:ch211-212k18.5	58	59.184	ENSPMEG00000006335	sall2	60	47.266	Poecilia_mexicana
ENSACLG00000009709	si:ch211-212k18.5	99	72.525	ENSPMEG00000016395	si:ch211-212k18.5	99	72.751	Poecilia_mexicana
ENSACLG00000009709	si:ch211-212k18.5	99	72.445	ENSPREG00000005292	si:ch211-212k18.5	99	72.578	Poecilia_reticulata
ENSACLG00000009709	si:ch211-212k18.5	58	59.184	ENSPREG00000021908	sall2	60	48.100	Poecilia_reticulata
ENSACLG00000009709	si:ch211-212k18.5	97	98.108	ENSPNYG00000021576	si:ch211-212k18.5	97	98.108	Pundamilia_nyererei
ENSACLG00000009709	si:ch211-212k18.5	95	57.719	ENSPNAG00000006123	si:ch211-212k18.5	99	54.061	Pygocentrus_nattereri
ENSACLG00000009709	si:ch211-212k18.5	65	46.753	ENSPNAG00000021463	sall2	57	48.860	Pygocentrus_nattereri
ENSACLG00000009709	si:ch211-212k18.5	100	74.778	ENSSMAG00000006241	si:ch211-212k18.5	100	74.134	Scophthalmus_maximus
ENSACLG00000009709	si:ch211-212k18.5	78	46.599	ENSSMAG00000014157	sall2	73	46.083	Scophthalmus_maximus
ENSACLG00000009709	si:ch211-212k18.5	100	77.796	ENSSDUG00000006164	si:ch211-212k18.5	100	77.635	Seriola_dumerili
ENSACLG00000009709	si:ch211-212k18.5	79	46.512	ENSSDUG00000012274	sall2	74	45.938	Seriola_dumerili
ENSACLG00000009709	si:ch211-212k18.5	79	46.457	ENSSLDG00000001653	sall2	74	45.921	Seriola_lalandi_dorsalis
ENSACLG00000009709	si:ch211-212k18.5	100	79.887	ENSSLDG00000003393	si:ch211-212k18.5	100	79.566	Seriola_lalandi_dorsalis
ENSACLG00000009709	si:ch211-212k18.5	66	48.695	ENSSPAG00000023009	sall2	73	45.723	Stegastes_partitus
ENSACLG00000009709	si:ch211-212k18.5	99	78.714	ENSSPAG00000013435	si:ch211-212k18.5	99	78.975	Stegastes_partitus
ENSACLG00000009709	si:ch211-212k18.5	90	77.086	ENSTRUG00000025082	si:ch211-212k18.5	97	73.977	Takifugu_rubripes
ENSACLG00000009709	si:ch211-212k18.5	60	44.640	ENSTRUG00000024556	sall2	64	45.566	Takifugu_rubripes
ENSACLG00000009709	si:ch211-212k18.5	99	71.500	ENSXCOG00000000762	si:ch211-212k18.5	99	71.675	Xiphophorus_couchianus
ENSACLG00000009709	si:ch211-212k18.5	99	73.300	ENSXMAG00000001461	si:ch211-212k18.5	99	73.153	Xiphophorus_maculatus
ENSACLG00000009709	si:ch211-212k18.5	58	56.863	ENSXMAG00000000902	sall2	60	47.775	Xiphophorus_maculatus