EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000009742 (Gene tree)
Gene ID: 113008585
Gene Symbol: swt1
Alias: si:dkeyp-11g8.2|si:dkeyp-11g8.4|wu:fb81g09
Full Name: SWT1%2C RNA endoribonuclease homolog
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 15345 bases
Position: chr17:37196687-37212031
Accession: 113008585
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014298	PIN_4	PF13638.6	3.9e-30	1	1
ENSACLP00000014285	PIN_4	PF13638.6	4.3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014629	-	2773	XM_026146061	ENSACLP00000014285	798 (aa)	XP_026001846	-
ENSACLT00000014642	-	2866	-	ENSACLP00000014298	773 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009742's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009742	swt1	68	32.923	ENSG00000116668	SWT1	58	32.923	Homo_sapiens
ENSACLG00000009742	swt1	98	70.425	ENSAPOG00000014897	-	83	70.425	Acanthochromis_polyacanthus
ENSACLG00000009742	swt1	68	33.162	ENSAMEG00000013585	SWT1	59	33.391	Ailuropoda_melanoleuca
ENSACLG00000009742	swt1	98	61.832	ENSAOCG00000013932	swt1	85	66.608	Amphiprion_ocellaris
ENSACLG00000009742	swt1	98	61.985	ENSAPEG00000009613	-	93	61.985	Amphiprion_percula
ENSACLG00000009742	swt1	98	67.532	ENSATEG00000018946	swt1	82	66.417	Anabas_testudineus
ENSACLG00000009742	swt1	67	37.037	ENSAPLG00000008607	SWT1	72	37.011	Anas_platyrhynchos
ENSACLG00000009742	swt1	67	36.559	ENSACAG00000002276	SWT1	60	36.201	Anolis_carolinensis
ENSACLG00000009742	swt1	68	32.807	ENSANAG00000027068	SWT1	59	33.158	Aotus_nancymaae
ENSACLG00000009742	swt1	70	45.884	ENSAMXG00000010971	swt1	56	46.303	Astyanax_mexicanus
ENSACLG00000009742	swt1	68	32.118	ENSCJAG00000005544	SWT1	59	32.465	Callithrix_jacchus
ENSACLG00000009742	swt1	68	33.391	ENSCAFG00000013543	SWT1	62	33.565	Canis_familiaris
ENSACLG00000009742	swt1	68	33.391	ENSCAFG00020015648	SWT1	63	33.565	Canis_lupus_dingo
ENSACLG00000009742	swt1	68	32.522	ENSCHIG00000023511	SWT1	92	32.014	Capra_hircus
ENSACLG00000009742	swt1	68	32.456	ENSTSYG00000010470	SWT1	59	32.281	Carlito_syrichta
ENSACLG00000009742	swt1	69	32.513	ENSCPOG00000014251	SWT1	71	31.137	Cavia_porcellus
ENSACLG00000009742	swt1	68	33.391	ENSCCAG00000033926	SWT1	59	33.739	Cebus_capucinus
ENSACLG00000009742	swt1	68	33.161	ENSCATG00000042210	SWT1	91	33.506	Cercocebus_atys
ENSACLG00000009742	swt1	73	32.190	ENSCLAG00000013959	SWT1	65	31.699	Chinchilla_lanigera
ENSACLG00000009742	swt1	67	32.746	ENSCSAG00000012895	SWT1	58	33.099	Chlorocebus_sabaeus
ENSACLG00000009742	swt1	68	35.813	ENSCPBG00000015691	SWT1	60	36.034	Chrysemys_picta_bellii
ENSACLG00000009742	swt1	71	32.508	ENSCANG00000032207	SWT1	91	33.160	Colobus_angolensis_palliatus
ENSACLG00000009742	swt1	73	32.195	ENSCGRG00001022955	Swt1	67	32.195	Cricetulus_griseus_chok1gshd
ENSACLG00000009742	swt1	73	32.195	ENSCGRG00000010224	Swt1	64	32.195	Cricetulus_griseus_crigri
ENSACLG00000009742	swt1	75	58.238	ENSCSEG00000017352	swt1	80	57.471	Cynoglossus_semilaevis
ENSACLG00000009742	swt1	67	47.786	ENSDARG00000094010	swt1	66	42.216	Danio_rerio
ENSACLG00000009742	swt1	70	32.247	ENSDNOG00000005254	SWT1	58	33.268	Dasypus_novemcinctus
ENSACLG00000009742	swt1	68	31.542	ENSDORG00000010531	Swt1	64	32.517	Dipodomys_ordii
ENSACLG00000009742	swt1	79	30.653	ENSEASG00005005530	SWT1	72	30.804	Equus_asinus_asinus
ENSACLG00000009742	swt1	67	52.087	ENSELUG00000020565	swt1	53	52.622	Esox_lucius
ENSACLG00000009742	swt1	68	32.639	ENSFCAG00000011286	SWT1	59	32.465	Felis_catus
ENSACLG00000009742	swt1	67	34.266	ENSFALG00000003206	SWT1	59	34.266	Ficedula_albicollis
ENSACLG00000009742	swt1	68	32.353	ENSFDAG00000007569	SWT1	60	32.353	Fukomys_damarensis
ENSACLG00000009742	swt1	67	35.802	ENSGALG00000034230	SWT1	61	35.802	Gallus_gallus
ENSACLG00000009742	swt1	86	63.235	ENSGAFG00000007803	-	75	61.949	Gambusia_affinis
ENSACLG00000009742	swt1	65	36.502	ENSGAGG00000025050	SWT1	90	35.897	Gopherus_agassizii
ENSACLG00000009742	swt1	65	32.423	ENSGGOG00000041167	-	91	32.423	Gorilla_gorilla
ENSACLG00000009742	swt1	100	99.373	ENSHBUG00000006188	swt1	96	99.373	Haplochromis_burtoni
ENSACLG00000009742	swt1	67	34.159	ENSHGLG00000006542	SWT1	62	34.281	Heterocephalus_glaber_female
ENSACLG00000009742	swt1	67	34.281	ENSHGLG00100014408	SWT1	60	34.281	Heterocephalus_glaber_male
ENSACLG00000009742	swt1	70	38.863	ENSHCOG00000016930	-	86	39.659	Hippocampus_comes
ENSACLG00000009742	swt1	67	46.055	ENSIPUG00000009113	-	54	46.055	Ictalurus_punctatus
ENSACLG00000009742	swt1	68	32.807	ENSSTOG00000010356	SWT1	60	32.807	Ictidomys_tridecemlineatus
ENSACLG00000009742	swt1	68	34.043	ENSJJAG00000015927	Swt1	61	34.043	Jaculus_jaculus
ENSACLG00000009742	swt1	100	67.347	ENSKMAG00000012533	swt1	77	67.161	Kryptolebias_marmoratus
ENSACLG00000009742	swt1	96	65.741	ENSLBEG00000020663	-	82	65.741	Labrus_bergylta
ENSACLG00000009742	swt1	68	35.377	ENSLACG00000009194	SWT1	78	35.377	Latimeria_chalumnae
ENSACLG00000009742	swt1	67	43.234	ENSLOCG00000001749	swt1	97	42.754	Lepisosteus_oculatus
ENSACLG00000009742	swt1	68	31.661	ENSLAFG00000004346	-	92	31.661	Loxodonta_africana
ENSACLG00000009742	swt1	68	32.815	ENSMFAG00000031793	SWT1	92	33.161	Macaca_fascicularis
ENSACLG00000009742	swt1	67	32.628	ENSMMUG00000013882	SWT1	91	32.981	Macaca_mulatta
ENSACLG00000009742	swt1	68	32.815	ENSMNEG00000035502	SWT1	92	33.161	Macaca_nemestrina
ENSACLG00000009742	swt1	68	33.161	ENSMLEG00000038692	SWT1	91	33.161	Mandrillus_leucophaeus
ENSACLG00000009742	swt1	100	100.000	ENSMZEG00005018489	swt1	96	100.000	Maylandia_zebra
ENSACLG00000009742	swt1	67	35.789	ENSMGAG00000000973	SWT1	91	35.149	Meleagris_gallopavo
ENSACLG00000009742	swt1	71	33.389	ENSMICG00000014975	SWT1	62	33.556	Microcebus_murinus
ENSACLG00000009742	swt1	68	33.508	ENSMOCG00000009776	Swt1	59	33.333	Microtus_ochrogaster
ENSACLG00000009742	swt1	67	34.229	ENSMODG00000007472	SWT1	57	34.229	Monodelphis_domestica
ENSACLG00000009742	swt1	98	66.916	ENSMALG00000019308	swt1	81	66.542	Monopterus_albus
ENSACLG00000009742	swt1	75	33.013	MGP_CAROLIEiJ_G0014692	Swt1	68	42.442	Mus_caroli
ENSACLG00000009742	swt1	75	32.372	ENSMUSG00000052748	Swt1	68	41.279	Mus_musculus
ENSACLG00000009742	swt1	68	33.800	MGP_PahariEiJ_G0027928	Swt1	68	41.860	Mus_pahari
ENSACLG00000009742	swt1	75	32.532	MGP_SPRETEiJ_G0015499	Swt1	68	41.860	Mus_spretus
ENSACLG00000009742	swt1	68	34.087	ENSMPUG00000011913	SWT1	59	34.261	Mustela_putorius_furo
ENSACLG00000009742	swt1	72	31.395	ENSMLUG00000001142	SWT1	62	30.731	Myotis_lucifugus
ENSACLG00000009742	swt1	67	33.393	ENSNGAG00000021080	Swt1	59	33.158	Nannospalax_galili
ENSACLG00000009742	swt1	68	32.696	ENSNLEG00000018031	SWT1	59	32.810	Nomascus_leucogenys
ENSACLG00000009742	swt1	100	88.015	ENSONIG00000009994	swt1	96	88.015	Oreochromis_niloticus
ENSACLG00000009742	swt1	67	33.979	ENSOANG00000001013	-	68	33.451	Ornithorhynchus_anatinus
ENSACLG00000009742	swt1	68	33.800	ENSOCUG00000004901	SWT1	60	33.625	Oryctolagus_cuniculus
ENSACLG00000009742	swt1	93	62.247	ENSORLG00000009682	swt1	80	61.581	Oryzias_latipes
ENSACLG00000009742	swt1	98	62.936	ENSORLG00020011654	swt1	87	62.271	Oryzias_latipes_hni
ENSACLG00000009742	swt1	91	61.694	ENSORLG00015007734	swt1	76	61.029	Oryzias_latipes_hsok
ENSACLG00000009742	swt1	97	54.021	ENSOMEG00000006607	swt1	86	53.343	Oryzias_melastigma
ENSACLG00000009742	swt1	68	32.807	ENSOGAG00000016195	SWT1	59	32.807	Otolemur_garnettii
ENSACLG00000009742	swt1	68	32.696	ENSOARG00000004156	SWT1	58	32.696	Ovis_aries
ENSACLG00000009742	swt1	68	32.986	ENSPPAG00000021400	SWT1	59	32.753	Pan_paniscus
ENSACLG00000009742	swt1	68	33.160	ENSPPRG00000023754	SWT1	59	33.333	Panthera_pardus
ENSACLG00000009742	swt1	68	33.160	ENSPTIG00000021889	SWT1	59	33.333	Panthera_tigris_altaica
ENSACLG00000009742	swt1	68	32.986	ENSPTRG00000001777	SWT1	59	32.753	Pan_troglodytes
ENSACLG00000009742	swt1	68	32.988	ENSPANG00000005099	SWT1	91	33.333	Papio_anubis
ENSACLG00000009742	swt1	66	48.799	ENSPKIG00000005979	swt1	55	48.346	Paramormyrops_kingsleyae
ENSACLG00000009742	swt1	68	35.506	ENSPSIG00000008961	SWT1	59	36.034	Pelodiscus_sinensis
ENSACLG00000009742	swt1	68	33.333	ENSPEMG00000008208	Swt1	59	33.857	Peromyscus_maniculatus_bairdii
ENSACLG00000009742	swt1	93	63.553	ENSPFOG00000010988	-	94	50.672	Poecilia_formosa
ENSACLG00000009742	swt1	93	63.736	ENSPLAG00000022908	-	76	62.591	Poecilia_latipinna
ENSACLG00000009742	swt1	93	63.553	ENSPMEG00000006943	-	76	62.409	Poecilia_mexicana
ENSACLG00000009742	swt1	60	66.535	ENSPREG00000014723	-	65	63.736	Poecilia_reticulata
ENSACLG00000009742	swt1	68	32.927	ENSPPYG00000000415	SWT1	59	33.275	Pongo_abelii
ENSACLG00000009742	swt1	100	99.499	ENSPNYG00000012934	swt1	96	99.499	Pundamilia_nyererei
ENSACLG00000009742	swt1	68	46.570	ENSPNAG00000017795	swt1	56	46.570	Pygocentrus_nattereri
ENSACLG00000009742	swt1	73	32.623	ENSRNOG00000032258	Swt1	76	31.073	Rattus_norvegicus
ENSACLG00000009742	swt1	68	32.696	ENSRBIG00000040630	SWT1	91	32.696	Rhinopithecus_bieti
ENSACLG00000009742	swt1	68	32.807	ENSSBOG00000028825	SWT1	59	33.570	Saimiri_boliviensis_boliviensis
ENSACLG00000009742	swt1	71	33.890	ENSSHAG00000009241	SWT1	62	34.004	Sarcophilus_harrisii
ENSACLG00000009742	swt1	67	48.370	ENSSFOG00015004895	swt1	54	48.288	Scleropages_formosus
ENSACLG00000009742	swt1	89	66.359	ENSSMAG00000020761	-	61	66.296	Scophthalmus_maximus
ENSACLG00000009742	swt1	98	70.718	ENSSDUG00000012345	swt1	81	70.718	Seriola_dumerili
ENSACLG00000009742	swt1	98	67.832	ENSSLDG00000003821	swt1	84	67.832	Seriola_lalandi_dorsalis
ENSACLG00000009742	swt1	68	35.517	ENSSPUG00000003899	SWT1	59	35.345	Sphenodon_punctatus
ENSACLG00000009742	swt1	92	70.350	ENSSPAG00000001030	swt1	82	70.350	Stegastes_partitus
ENSACLG00000009742	swt1	76	31.811	ENSSSCG00000015569	SWT1	68	32.542	Sus_scrofa
ENSACLG00000009742	swt1	67	36.266	ENSTGUG00000003718	-	94	35.791	Taeniopygia_guttata
ENSACLG00000009742	swt1	69	59.292	ENSTRUG00000006420	swt1	60	58.099	Takifugu_rubripes
ENSACLG00000009742	swt1	70	31.570	ENSTTRG00000005914	SWT1	61	31.741	Tursiops_truncatus
ENSACLG00000009742	swt1	68	33.793	ENSUAMG00000020937	SWT1	64	33.966	Ursus_americanus
ENSACLG00000009742	swt1	68	33.793	ENSUMAG00000021918	SWT1	62	33.966	Ursus_maritimus
ENSACLG00000009742	swt1	61	34.694	ENSVPAG00000011855	SWT1	53	34.694	Vicugna_pacos
ENSACLG00000009742	swt1	68	33.391	ENSVVUG00000009182	SWT1	61	33.565	Vulpes_vulpes
ENSACLG00000009742	swt1	93	64.404	ENSXMAG00000023472	-	76	63.303	Xiphophorus_maculatus