EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009820 (Gene tree)
Gene ID: 113007870
Gene Symbol: rabl3
Alias: fb40b02|wu:fb40b02|zgc:100876
Full Name: RAB%2C member of RAS oncogene family like 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 7021 bases
Position: chr16:34624170-34631190
Accession: 113007870
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014413	MMR_HSR1	PF01926.23	7.6e-06	1	1
ENSACLP00000014398	MMR_HSR1	PF01926.23	8.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014759	-	618	-	ENSACLP00000014413	205 (aa)	-	-
ENSACLT00000014772	-	4880	-	ENSACLP00000014427	236 (aa)	XP_026000667	UPI000329BE91
ENSACLT00000014742	-	4778	-	ENSACLP00000014398	233 (aa)	XP_026000668	UPI0003299FCF

Gene Model

Click here to download ENSACLG00000009820's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009820's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009820	rabl3	59	31.405	ENSACLG00000022893	-	53	31.405
ENSACLG00000009820	rabl3	59	31.405	ENSACLG00000027590	-	53	31.405
ENSACLG00000009820	rabl3	59	32.231	ENSACLG00000009468	RAB39B	53	32.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009820	rabl3	100	85.169	ENSG00000144840	RABL3	100	91.473	Homo_sapiens
ENSACLG00000009820	rabl3	100	97.863	ENSAPOG00000024479	rabl3	100	97.863	Acanthochromis_polyacanthus
ENSACLG00000009820	rabl3	100	86.017	ENSAMEG00000004809	RABL3	100	86.017	Ailuropoda_melanoleuca
ENSACLG00000009820	rabl3	100	93.133	ENSACIG00000014343	rabl3	100	93.133	Amphilophus_citrinellus
ENSACLG00000009820	rabl3	100	97.863	ENSAOCG00000011851	rabl3	100	97.863	Amphiprion_ocellaris
ENSACLG00000009820	rabl3	100	97.863	ENSAPEG00000011214	rabl3	100	97.863	Amphiprion_percula
ENSACLG00000009820	rabl3	100	97.425	ENSATEG00000003503	rabl3	100	97.425	Anabas_testudineus
ENSACLG00000009820	rabl3	100	80.508	ENSACAG00000011313	-	100	80.508	Anolis_carolinensis
ENSACLG00000009820	rabl3	100	87.288	ENSANAG00000027278	RABL3	100	87.288	Aotus_nancymaae
ENSACLG00000009820	rabl3	100	93.991	ENSAMXG00000038716	rabl3	100	93.991	Astyanax_mexicanus
ENSACLG00000009820	rabl3	100	87.712	ENSBTAG00000015898	RABL3	100	87.712	Bos_taurus
ENSACLG00000009820	rabl3	100	87.288	ENSCJAG00000008611	RABL3	100	87.288	Callithrix_jacchus
ENSACLG00000009820	rabl3	100	86.864	ENSCAFG00000011292	RABL3	89	86.864	Canis_familiaris
ENSACLG00000009820	rabl3	100	86.864	ENSCAFG00020006397	RABL3	100	86.864	Canis_lupus_dingo
ENSACLG00000009820	rabl3	100	87.712	ENSCHIG00000017365	RABL3	100	87.712	Capra_hircus
ENSACLG00000009820	rabl3	100	85.593	ENSCPOG00000009645	RABL3	100	85.593	Cavia_porcellus
ENSACLG00000009820	rabl3	100	85.593	ENSCATG00000032561	RABL3	100	85.593	Cercocebus_atys
ENSACLG00000009820	rabl3	100	85.169	ENSCLAG00000010855	RABL3	100	85.169	Chinchilla_lanigera
ENSACLG00000009820	rabl3	99	85.408	ENSCSAG00000007155	RABL3	100	85.408	Chlorocebus_sabaeus
ENSACLG00000009820	rabl3	100	86.017	ENSCPBG00000001999	RABL3	100	86.017	Chrysemys_picta_bellii
ENSACLG00000009820	rabl3	100	85.593	ENSCANG00000031684	RABL3	100	85.593	Colobus_angolensis_palliatus
ENSACLG00000009820	rabl3	100	83.051	ENSCGRG00001021537	Rabl3	100	83.051	Cricetulus_griseus_chok1gshd
ENSACLG00000009820	rabl3	100	83.051	ENSCGRG00000002114	Rabl3	100	83.051	Cricetulus_griseus_crigri
ENSACLG00000009820	rabl3	100	90.476	ENSCSEG00000014982	rabl3	100	90.476	Cynoglossus_semilaevis
ENSACLG00000009820	rabl3	100	91.220	ENSCVAG00000009904	rabl3	100	91.220	Cyprinodon_variegatus
ENSACLG00000009820	rabl3	100	93.562	ENSDARG00000040959	rabl3	100	93.562	Danio_rerio
ENSACLG00000009820	rabl3	100	85.593	ENSDNOG00000008174	RABL3	100	85.593	Dasypus_novemcinctus
ENSACLG00000009820	rabl3	100	85.169	ENSETEG00000010206	RABL3	100	85.169	Echinops_telfairi
ENSACLG00000009820	rabl3	100	87.288	ENSECAG00000023059	RABL3	100	87.288	Equus_caballus
ENSACLG00000009820	rabl3	100	81.356	ENSEEUG00000002897	RABL3	100	81.356	Erinaceus_europaeus
ENSACLG00000009820	rabl3	100	93.562	ENSELUG00000014758	rabl3	100	93.562	Esox_lucius
ENSACLG00000009820	rabl3	100	86.864	ENSFCAG00000031879	RABL3	100	83.019	Felis_catus
ENSACLG00000009820	rabl3	100	83.898	ENSFALG00000005296	RABL3	100	83.898	Ficedula_albicollis
ENSACLG00000009820	rabl3	100	85.957	ENSFDAG00000000307	RABL3	100	85.957	Fukomys_damarensis
ENSACLG00000009820	rabl3	100	93.991	ENSFHEG00000011273	rabl3	100	93.991	Fundulus_heteroclitus
ENSACLG00000009820	rabl3	100	94.421	ENSGMOG00000007845	rabl3	100	94.421	Gadus_morhua
ENSACLG00000009820	rabl3	100	85.169	ENSGALG00000014949	RABL3	100	85.169	Gallus_gallus
ENSACLG00000009820	rabl3	100	93.562	ENSGAFG00000015953	rabl3	100	93.562	Gambusia_affinis
ENSACLG00000009820	rabl3	100	93.562	ENSGACG00000007387	rabl3	100	93.798	Gasterosteus_aculeatus
ENSACLG00000009820	rabl3	100	86.441	ENSGAGG00000003677	RABL3	100	86.441	Gopherus_agassizii
ENSACLG00000009820	rabl3	100	85.169	ENSGGOG00000006059	RABL3	100	85.169	Gorilla_gorilla
ENSACLG00000009820	rabl3	100	99.571	ENSHBUG00000019478	rabl3	93	99.571	Haplochromis_burtoni
ENSACLG00000009820	rabl3	100	85.957	ENSHGLG00000014491	RABL3	100	85.957	Heterocephalus_glaber_female
ENSACLG00000009820	rabl3	100	85.957	ENSHGLG00100004866	RABL3	100	85.957	Heterocephalus_glaber_male
ENSACLG00000009820	rabl3	100	93.659	ENSHCOG00000019245	rabl3	100	93.659	Hippocampus_comes
ENSACLG00000009820	rabl3	100	91.845	ENSIPUG00000012657	rabl3	100	91.845	Ictalurus_punctatus
ENSACLG00000009820	rabl3	100	85.169	ENSSTOG00000019452	RABL3	100	85.169	Ictidomys_tridecemlineatus
ENSACLG00000009820	rabl3	100	82.075	ENSJJAG00000023553	Rabl3	100	82.075	Jaculus_jaculus
ENSACLG00000009820	rabl3	100	90.558	ENSKMAG00000015464	rabl3	100	90.558	Kryptolebias_marmoratus
ENSACLG00000009820	rabl3	100	97.009	ENSLBEG00000010627	-	100	97.009	Labrus_bergylta
ENSACLG00000009820	rabl3	100	97.009	ENSLBEG00000020595	rabl3	100	97.009	Labrus_bergylta
ENSACLG00000009820	rabl3	100	88.136	ENSLOCG00000006265	rabl3	100	88.136	Lepisosteus_oculatus
ENSACLG00000009820	rabl3	100	86.441	ENSLAFG00000003711	RABL3	100	86.441	Loxodonta_africana
ENSACLG00000009820	rabl3	100	85.593	ENSMFAG00000031923	RABL3	100	85.593	Macaca_fascicularis
ENSACLG00000009820	rabl3	100	81.604	ENSMMUG00000001594	RABL3	100	81.604	Macaca_mulatta
ENSACLG00000009820	rabl3	100	85.593	ENSMNEG00000043980	RABL3	100	85.593	Macaca_nemestrina
ENSACLG00000009820	rabl3	100	85.593	ENSMLEG00000028177	RABL3	100	85.593	Mandrillus_leucophaeus
ENSACLG00000009820	rabl3	100	97.425	ENSMAMG00000015155	rabl3	100	97.425	Mastacembelus_armatus
ENSACLG00000009820	rabl3	100	100.000	ENSMZEG00005002607	rabl3	100	100.000	Maylandia_zebra
ENSACLG00000009820	rabl3	100	83.051	ENSMAUG00000013022	Rabl3	100	83.051	Mesocricetus_auratus
ENSACLG00000009820	rabl3	100	86.441	ENSMICG00000049288	RABL3	100	86.441	Microcebus_murinus
ENSACLG00000009820	rabl3	100	82.627	ENSMOCG00000015237	Rabl3	100	82.627	Microtus_ochrogaster
ENSACLG00000009820	rabl3	100	91.915	ENSMMOG00000005628	rabl3	100	91.915	Mola_mola
ENSACLG00000009820	rabl3	100	86.864	ENSMODG00000018232	RABL3	100	86.864	Monodelphis_domestica
ENSACLG00000009820	rabl3	100	90.254	ENSMALG00000018837	rabl3	100	90.254	Monopterus_albus
ENSACLG00000009820	rabl3	100	83.051	MGP_CAROLIEiJ_G0020728	Rabl3	100	90.698	Mus_caroli
ENSACLG00000009820	rabl3	100	83.051	ENSMUSG00000022827	Rabl3	100	90.698	Mus_musculus
ENSACLG00000009820	rabl3	100	82.627	MGP_PahariEiJ_G0016429	Rabl3	100	90.698	Mus_pahari
ENSACLG00000009820	rabl3	100	83.051	MGP_SPRETEiJ_G0021628	Rabl3	100	90.698	Mus_spretus
ENSACLG00000009820	rabl3	100	86.864	ENSMPUG00000008257	RABL3	89	86.864	Mustela_putorius_furo
ENSACLG00000009820	rabl3	100	86.017	ENSMLUG00000014113	RABL3	100	86.017	Myotis_lucifugus
ENSACLG00000009820	rabl3	99	81.553	ENSNGAG00000001939	Rabl3	99	81.553	Nannospalax_galili
ENSACLG00000009820	rabl3	93	98.157	ENSNBRG00000012423	rabl3	92	98.157	Neolamprologus_brichardi
ENSACLG00000009820	rabl3	100	85.169	ENSNLEG00000031723	RABL3	100	85.169	Nomascus_leucogenys
ENSACLG00000009820	rabl3	100	86.017	ENSMEUG00000006606	RABL3	100	86.017	Notamacropus_eugenii
ENSACLG00000009820	rabl3	100	85.169	ENSODEG00000004758	-	100	85.169	Octodon_degus
ENSACLG00000009820	rabl3	100	99.142	ENSONIG00000004281	rabl3	100	99.142	Oreochromis_niloticus
ENSACLG00000009820	rabl3	99	84.615	ENSOANG00000003928	RABL3	99	84.615	Ornithorhynchus_anatinus
ENSACLG00000009820	rabl3	100	95.279	ENSORLG00000020457	rabl3	100	95.279	Oryzias_latipes
ENSACLG00000009820	rabl3	100	95.279	ENSORLG00020008991	rabl3	100	90.558	Oryzias_latipes_hni
ENSACLG00000009820	rabl3	100	95.279	ENSORLG00015005649	rabl3	88	95.279	Oryzias_latipes_hsok
ENSACLG00000009820	rabl3	100	96.567	ENSOMEG00000015066	rabl3	100	96.567	Oryzias_melastigma
ENSACLG00000009820	rabl3	100	85.593	ENSOGAG00000005961	RABL3	100	85.593	Otolemur_garnettii
ENSACLG00000009820	rabl3	100	87.712	ENSOARG00000019939	RABL3	100	87.712	Ovis_aries
ENSACLG00000009820	rabl3	94	83.784	ENSPPAG00000036997	RABL3	87	83.784	Pan_paniscus
ENSACLG00000009820	rabl3	100	86.864	ENSPPRG00000016325	RABL3	100	86.864	Panthera_pardus
ENSACLG00000009820	rabl3	100	86.864	ENSPTIG00000018021	RABL3	100	86.864	Panthera_tigris_altaica
ENSACLG00000009820	rabl3	100	85.169	ENSPTRG00000015272	RABL3	100	85.169	Pan_troglodytes
ENSACLG00000009820	rabl3	100	85.593	ENSPANG00000001339	RABL3	100	85.593	Papio_anubis
ENSACLG00000009820	rabl3	100	93.562	ENSPKIG00000007818	rabl3	100	93.562	Paramormyrops_kingsleyae
ENSACLG00000009820	rabl3	100	85.593	ENSPSIG00000011358	RABL3	100	85.593	Pelodiscus_sinensis
ENSACLG00000009820	rabl3	100	89.700	ENSPMGG00000015794	rabl3	100	89.700	Periophthalmus_magnuspinnatus
ENSACLG00000009820	rabl3	100	83.051	ENSPEMG00000016913	Rabl3	100	83.051	Peromyscus_maniculatus_bairdii
ENSACLG00000009820	rabl3	100	86.017	ENSPCIG00000018922	RABL3	100	86.017	Phascolarctos_cinereus
ENSACLG00000009820	rabl3	100	95.279	ENSPFOG00000008586	rabl3	100	95.279	Poecilia_formosa
ENSACLG00000009820	rabl3	100	95.279	ENSPLAG00000014482	rabl3	100	95.279	Poecilia_latipinna
ENSACLG00000009820	rabl3	100	95.279	ENSPMEG00000002295	rabl3	100	95.279	Poecilia_mexicana
ENSACLG00000009820	rabl3	100	94.850	ENSPREG00000014815	rabl3	100	94.850	Poecilia_reticulata
ENSACLG00000009820	rabl3	100	85.593	ENSPPYG00000013501	RABL3	100	85.593	Pongo_abelii
ENSACLG00000009820	rabl3	100	86.864	ENSPCOG00000022230	RABL3	100	86.864	Propithecus_coquereli
ENSACLG00000009820	rabl3	100	85.169	ENSPVAG00000010013	RABL3	100	85.169	Pteropus_vampyrus
ENSACLG00000009820	rabl3	100	99.571	ENSPNYG00000006659	rabl3	100	99.571	Pundamilia_nyererei
ENSACLG00000009820	rabl3	100	95.708	ENSPNAG00000000748	rabl3	100	95.708	Pygocentrus_nattereri
ENSACLG00000009820	rabl3	100	82.627	ENSRNOG00000026085	Rabl3	100	82.627	Rattus_norvegicus
ENSACLG00000009820	rabl3	100	85.593	ENSRBIG00000040941	RABL3	100	85.593	Rhinopithecus_bieti
ENSACLG00000009820	rabl3	100	85.593	ENSRROG00000043745	RABL3	100	85.593	Rhinopithecus_roxellana
ENSACLG00000009820	rabl3	100	87.288	ENSSBOG00000004022	RABL3	100	87.288	Saimiri_boliviensis_boliviensis
ENSACLG00000009820	rabl3	100	85.169	ENSSHAG00000012233	RABL3	100	85.169	Sarcophilus_harrisii
ENSACLG00000009820	rabl3	100	93.562	ENSSFOG00015010171	rabl3	100	93.562	Scleropages_formosus
ENSACLG00000009820	rabl3	100	96.581	ENSSMAG00000002403	rabl3	100	96.581	Scophthalmus_maximus
ENSACLG00000009820	rabl3	100	97.854	ENSSDUG00000012078	rabl3	100	97.854	Seriola_dumerili
ENSACLG00000009820	rabl3	100	98.283	ENSSLDG00000021899	rabl3	100	98.283	Seriola_lalandi_dorsalis
ENSACLG00000009820	rabl3	100	86.441	ENSSARG00000008316	RABL3	100	86.441	Sorex_araneus
ENSACLG00000009820	rabl3	100	85.593	ENSSPUG00000017490	RABL3	100	85.593	Sphenodon_punctatus
ENSACLG00000009820	rabl3	100	98.283	ENSSPAG00000011642	rabl3	100	98.283	Stegastes_partitus
ENSACLG00000009820	rabl3	100	87.288	ENSSSCG00000035258	RABL3	100	87.288	Sus_scrofa
ENSACLG00000009820	rabl3	100	84.322	ENSTGUG00000013374	RABL3	100	84.322	Taeniopygia_guttata
ENSACLG00000009820	rabl3	87	96.089	ENSTRUG00000007846	RABL3	100	96.094	Takifugu_rubripes
ENSACLG00000009820	rabl3	100	73.305	ENSTBEG00000005153	RABL3	100	73.305	Tupaia_belangeri
ENSACLG00000009820	rabl3	100	86.017	ENSUAMG00000005299	RABL3	100	86.017	Ursus_americanus
ENSACLG00000009820	rabl3	100	85.593	ENSUMAG00000025256	RABL3	89	85.593	Ursus_maritimus
ENSACLG00000009820	rabl3	100	87.288	ENSVPAG00000003776	RABL3	100	87.288	Vicugna_pacos
ENSACLG00000009820	rabl3	100	86.864	ENSVVUG00000022300	RABL3	89	86.864	Vulpes_vulpes
ENSACLG00000009820	rabl3	100	94.850	ENSXMAG00000003244	rabl3	100	94.850	Xiphophorus_maculatus