EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009822 (Gene tree)
Gene ID: 113022235
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3298 bases
Position: chr5:14699118-14702415
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014414	MMR_HSR1	PF01926.23	6.5e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014758	-	564	-	ENSACLP00000014414	187 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009822's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009822's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009822	-	75	36.620	ENSACLG00000011996	arl8a	76	36.620
ENSACLG00000009822	-	91	71.930	ENSACLG00000005705	arf5	95	71.930
ENSACLG00000009822	-	74	35.971	ENSACLG00000013597	arl8ba	75	35.971
ENSACLG00000009822	-	91	42.690	ENSACLG00000000922	arl5c	100	42.424
ENSACLG00000009822	-	84	46.835	ENSACLG00000021338	arl2	86	46.835
ENSACLG00000009822	-	71	33.835	ENSACLG00000014649	sar1b	67	33.835
ENSACLG00000009822	-	91	69.006	ENSACLG00000022124	arf2b	94	69.006
ENSACLG00000009822	-	82	48.125	ENSACLG00000024991	arl4d	80	48.125
ENSACLG00000009822	-	91	45.614	ENSACLG00000000787	arl8	95	45.614
ENSACLG00000009822	-	60	31.967	ENSACLG00000003326	-	57	31.967
ENSACLG00000009822	-	63	31.250	ENSACLG00000007644	rab1ab	57	31.967
ENSACLG00000009822	-	91	68.421	ENSACLG00000004123	-	94	68.421
ENSACLG00000009822	-	83	40.994	ENSACLG00000024656	ARL6	87	40.994
ENSACLG00000009822	-	83	42.683	ENSACLG00000011811	-	81	42.683
ENSACLG00000009822	-	86	47.205	ENSACLG00000008835	arl3l2	86	47.205
ENSACLG00000009822	-	91	53.216	ENSACLG00000008188	arl1	94	53.216
ENSACLG00000009822	-	89	48.276	ENSACLG00000014159	-	91	47.727
ENSACLG00000009822	-	75	36.620	ENSACLG00000021872	arl8bb	76	36.620
ENSACLG00000009822	-	91	67.836	ENSACLG00000006072	-	94	67.836
ENSACLG00000009822	-	91	71.345	ENSACLG00000025604	-	95	71.345
ENSACLG00000009822	-	84	45.912	ENSACLG00000027139	arl3	87	45.912
ENSACLG00000009822	-	83	47.853	ENSACLG00000016659	-	81	47.853
ENSACLG00000009822	-	91	67.836	ENSACLG00000024971	arf3b	94	67.836
ENSACLG00000009822	-	83	57.595	ENSACLG00000022869	-	100	57.595
ENSACLG00000009822	-	86	36.364	ENSACLG00000024227	arl13b	70	36.364
ENSACLG00000009822	-	91	66.667	ENSACLG00000017387	-	95	66.667
ENSACLG00000009822	-	91	45.029	ENSACLG00000019945	arl5a	95	45.029
ENSACLG00000009822	-	86	42.593	ENSACLG00000012519	-	95	42.045
ENSACLG00000009822	-	94	35.484	ENSACLG00000002442	arfrp1	91	34.783
ENSACLG00000009822	-	60	31.967	ENSACLG00000013668	rab1ba	58	31.967
ENSACLG00000009822	-	84	43.558	ENSACLG00000020245	-	87	43.558
ENSACLG00000009822	-	71	36.090	ENSACLG00000005011	-	67	36.090
ENSACLG00000009822	-	71	33.083	ENSACLG00000013053	sar1ab	67	33.083
ENSACLG00000009822	-	81	43.671	ENSACLG00000026984	arl14	78	43.671
ENSACLG00000009822	-	82	49.375	ENSACLG00000014218	arl4cb	83	49.375
ENSACLG00000009822	-	83	51.572	ENSACLG00000015415	-	77	51.572

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009822	-	91	85.294	ENSAPEG00000002838	-	95	85.294	Amphiprion_percula
ENSACLG00000009822	-	79	83.108	ENSATEG00000003808	-	84	83.108	Anabas_testudineus
ENSACLG00000009822	-	91	84.706	ENSATEG00000003847	-	95	84.706	Anabas_testudineus
ENSACLG00000009822	-	73	81.022	ENSCVAG00000013902	-	84	81.022	Cyprinodon_variegatus
ENSACLG00000009822	-	79	84.459	ENSFHEG00000019659	-	84	84.459	Fundulus_heteroclitus
ENSACLG00000009822	-	58	88.889	ENSGAFG00000002801	-	96	88.889	Gambusia_affinis
ENSACLG00000009822	-	91	87.209	ENSGACG00000003831	-	96	87.209	Gasterosteus_aculeatus
ENSACLG00000009822	-	91	97.647	ENSHBUG00000001250	-	95	97.647	Haplochromis_burtoni
ENSACLG00000009822	-	91	87.647	ENSLBEG00000027205	-	96	87.647	Labrus_bergylta
ENSACLG00000009822	-	91	84.118	ENSMAMG00000013955	-	95	84.118	Mastacembelus_armatus
ENSACLG00000009822	-	91	100.000	ENSMZEG00005016274	-	95	100.000	Maylandia_zebra
ENSACLG00000009822	-	91	100.000	ENSMZEG00005016277	-	95	100.000	Maylandia_zebra
ENSACLG00000009822	-	91	82.941	ENSMMOG00000013651	-	94	82.941	Mola_mola
ENSACLG00000009822	-	91	98.235	ENSONIG00000004340	-	95	98.235	Oreochromis_niloticus
ENSACLG00000009822	-	91	84.706	ENSPLAG00000015887	-	95	84.706	Poecilia_latipinna
ENSACLG00000009822	-	91	84.706	ENSPMEG00000007064	-	95	84.706	Poecilia_mexicana
ENSACLG00000009822	-	91	84.706	ENSPREG00000000912	-	99	84.706	Poecilia_reticulata
ENSACLG00000009822	-	91	71.144	ENSSMAG00000002487	-	96	71.144	Scophthalmus_maximus
ENSACLG00000009822	-	91	84.118	ENSSDUG00000020599	-	95	84.118	Seriola_dumerili
ENSACLG00000009822	-	91	85.294	ENSSLDG00000020097	-	95	85.294	Seriola_lalandi_dorsalis
ENSACLG00000009822	-	91	84.706	ENSSPAG00000017484	-	95	84.706	Stegastes_partitus
ENSACLG00000009822	-	85	75.472	ENSTRUG00000025171	-	98	75.472	Takifugu_rubripes
ENSACLG00000009822	-	60	82.143	ENSTNIG00000005043	-	99	82.143	Tetraodon_nigroviridis
ENSACLG00000009822	-	80	75.333	ENSTNIG00000018302	-	78	68.539	Tetraodon_nigroviridis
ENSACLG00000009822	-	80	77.852	ENSTNIG00000001632	-	78	70.621	Tetraodon_nigroviridis
ENSACLG00000009822	-	84	75.796	ENSTNIG00000000796	-	78	70.621	Tetraodon_nigroviridis
ENSACLG00000009822	-	91	84.706	ENSXMAG00000029601	-	95	84.706	Xiphophorus_maculatus