EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000009919 (Gene tree)
Gene ID: 113036382
Gene Symbol: polr2d
Alias: rnap|wu:fa95b11|zgc:110435
Full Name: RNA polymerase II subunit D
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 7099 bases
Position: chr14:506161-513259
Accession: 113036382
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014555	RNA_pol_Rpb4	PF03874.16	1.1e-25	1	1
ENSACLP00000014564	RNA_pol_Rpb4	PF03874.16	9.2e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000014914	-	339	-	ENSACLP00000014564	112 (aa)	-	-
ENSACLT00000014905	-	639	-	ENSACLP00000014555	212 (aa)	XP_026048492	UPI000E40CE36

Gene Model

Click here to download ENSACLG00000009919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009919's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009919	polr2d	100	90.179	ENSG00000144231	POLR2D	100	95.192	Homo_sapiens
ENSACLG00000009919	polr2d	100	98.214	ENSAPOG00000023553	polr2d	100	98.611	Acanthochromis_polyacanthus
ENSACLG00000009919	polr2d	100	69.178	ENSAMEG00000011746	POLR2D	100	89.041	Ailuropoda_melanoleuca
ENSACLG00000009919	polr2d	100	76.389	ENSAOCG00000007295	polr2d	100	98.611	Amphiprion_ocellaris
ENSACLG00000009919	polr2d	100	98.214	ENSAPEG00000018714	polr2d	100	98.611	Amphiprion_percula
ENSACLG00000009919	polr2d	100	75.000	ENSATEG00000020416	polr2d	100	97.222	Anabas_testudineus
ENSACLG00000009919	polr2d	100	68.750	ENSACAG00000005255	POLR2D	100	89.583	Anolis_carolinensis
ENSACLG00000009919	polr2d	100	70.139	ENSANAG00000019959	POLR2D	100	90.278	Aotus_nancymaae
ENSACLG00000009919	polr2d	90	72.932	ENSAMXG00000008954	polr2d	99	92.958	Astyanax_mexicanus
ENSACLG00000009919	polr2d	100	70.139	ENSBTAG00000053244	POLR2D	100	90.278	Bos_taurus
ENSACLG00000009919	polr2d	99	43.448	WBGene00018391	rpb-4	100	57.931	Caenorhabditis_elegans
ENSACLG00000009919	polr2d	100	70.139	ENSCJAG00000042216	-	100	90.278	Callithrix_jacchus
ENSACLG00000009919	polr2d	100	69.444	ENSCJAG00000021814	-	100	89.583	Callithrix_jacchus
ENSACLG00000009919	polr2d	100	70.139	ENSCAFG00000004311	POLR2D	100	90.278	Canis_familiaris
ENSACLG00000009919	polr2d	100	70.139	ENSCAFG00020003617	POLR2D	100	90.278	Canis_lupus_dingo
ENSACLG00000009919	polr2d	100	70.139	ENSCHIG00000025995	POLR2D	100	90.278	Capra_hircus
ENSACLG00000009919	polr2d	55	94.017	ENSTSYG00000036021	POLR2D	100	94.017	Carlito_syrichta
ENSACLG00000009919	polr2d	100	70.139	ENSCPOG00000002571	POLR2D	100	90.278	Cavia_porcellus
ENSACLG00000009919	polr2d	100	70.139	ENSCCAG00000037709	POLR2D	100	90.278	Cebus_capucinus
ENSACLG00000009919	polr2d	100	70.833	ENSCATG00000036749	POLR2D	100	90.972	Cercocebus_atys
ENSACLG00000009919	polr2d	100	69.444	ENSCLAG00000004449	POLR2D	100	89.583	Chinchilla_lanigera
ENSACLG00000009919	polr2d	100	70.833	ENSCSAG00000016861	POLR2D	100	90.972	Chlorocebus_sabaeus
ENSACLG00000009919	polr2d	55	94.872	ENSCHOG00000013850	POLR2D	100	94.872	Choloepus_hoffmanni
ENSACLG00000009919	polr2d	100	70.139	ENSCPBG00000019132	POLR2D	51	90.972	Chrysemys_picta_bellii
ENSACLG00000009919	polr2d	86	65.625	ENSCING00000011474	-	96	87.500	Ciona_intestinalis
ENSACLG00000009919	polr2d	99	61.111	ENSCSAVG00000008353	-	99	81.250	Ciona_savignyi
ENSACLG00000009919	polr2d	100	70.139	ENSCANG00000043665	POLR2D	100	90.278	Colobus_angolensis_palliatus
ENSACLG00000009919	polr2d	100	70.139	ENSCGRG00001013608	Polr2d	100	90.278	Cricetulus_griseus_chok1gshd
ENSACLG00000009919	polr2d	55	94.872	ENSCGRG00000012624	Polr2d	100	94.872	Cricetulus_griseus_crigri
ENSACLG00000009919	polr2d	100	74.306	ENSCSEG00000006147	polr2d	100	96.528	Cynoglossus_semilaevis
ENSACLG00000009919	polr2d	100	73.611	ENSCVAG00000000779	polr2d	100	95.139	Cyprinodon_variegatus
ENSACLG00000009919	polr2d	100	70.139	ENSDARG00000076509	polr2d	100	92.361	Danio_rerio
ENSACLG00000009919	polr2d	100	70.833	ENSDNOG00000008527	POLR2D	100	90.972	Dasypus_novemcinctus
ENSACLG00000009919	polr2d	100	70.139	ENSDORG00000026897	Polr2d	100	90.278	Dipodomys_ordii
ENSACLG00000009919	polr2d	90	56.391	FBgn0263757	Rpb4	96	77.444	Drosophila_melanogaster
ENSACLG00000009919	polr2d	100	68.056	ENSEBUG00000007675	polr2d	100	89.583	Eptatretus_burgeri
ENSACLG00000009919	polr2d	100	70.139	ENSEASG00005007103	POLR2D	100	90.278	Equus_asinus_asinus
ENSACLG00000009919	polr2d	100	70.139	ENSECAG00000000556	POLR2D	100	90.278	Equus_caballus
ENSACLG00000009919	polr2d	100	71.528	ENSELUG00000005928	polr2d	100	93.750	Esox_lucius
ENSACLG00000009919	polr2d	100	70.139	ENSFCAG00000027816	POLR2D	100	90.278	Felis_catus
ENSACLG00000009919	polr2d	100	69.444	ENSFALG00000003528	POLR2D	100	90.278	Ficedula_albicollis
ENSACLG00000009919	polr2d	100	68.750	ENSFDAG00000007217	POLR2D	100	88.889	Fukomys_damarensis
ENSACLG00000009919	polr2d	98	70.423	ENSGMOG00000001823	polr2d	99	92.958	Gadus_morhua
ENSACLG00000009919	polr2d	100	69.444	ENSGALG00000002057	POLR2D	100	90.278	Gallus_gallus
ENSACLG00000009919	polr2d	100	73.611	ENSGAFG00000016932	polr2d	99	73.430	Gambusia_affinis
ENSACLG00000009919	polr2d	100	72.917	ENSGACG00000004639	polr2d	100	94.444	Gasterosteus_aculeatus
ENSACLG00000009919	polr2d	100	69.444	ENSGAGG00000021308	POLR2D	100	90.278	Gopherus_agassizii
ENSACLG00000009919	polr2d	100	70.139	ENSGGOG00000004723	POLR2D	100	90.278	Gorilla_gorilla
ENSACLG00000009919	polr2d	100	69.444	ENSHGLG00000016570	Polr2d	100	89.583	Heterocephalus_glaber_female
ENSACLG00000009919	polr2d	100	69.444	ENSHGLG00100013785	Polr2d	100	89.583	Heterocephalus_glaber_male
ENSACLG00000009919	polr2d	100	71.528	ENSHCOG00000006425	polr2d	100	93.056	Hippocampus_comes
ENSACLG00000009919	polr2d	100	70.833	ENSIPUG00000011192	polr2d	100	93.056	Ictalurus_punctatus
ENSACLG00000009919	polr2d	100	68.056	ENSSTOG00000023329	POLR2D	100	88.194	Ictidomys_tridecemlineatus
ENSACLG00000009919	polr2d	97	63.121	ENSJJAG00000000783	-	99	82.979	Jaculus_jaculus
ENSACLG00000009919	polr2d	100	70.139	ENSJJAG00000015053	-	100	90.278	Jaculus_jaculus
ENSACLG00000009919	polr2d	55	89.744	ENSJJAG00000005723	-	94	89.744	Jaculus_jaculus
ENSACLG00000009919	polr2d	55	99.138	ENSKMAG00000010677	polr2d	66	99.138	Kryptolebias_marmoratus
ENSACLG00000009919	polr2d	100	71.528	ENSLACG00000017253	POLR2D	100	93.056	Latimeria_chalumnae
ENSACLG00000009919	polr2d	100	72.917	ENSLOCG00000009106	polr2d	100	95.139	Lepisosteus_oculatus
ENSACLG00000009919	polr2d	100	69.444	ENSLAFG00000001848	POLR2D	100	89.583	Loxodonta_africana
ENSACLG00000009919	polr2d	100	70.833	ENSMFAG00000031937	POLR2D	100	90.972	Macaca_fascicularis
ENSACLG00000009919	polr2d	100	70.833	ENSMMUG00000001989	POLR2D	100	90.972	Macaca_mulatta
ENSACLG00000009919	polr2d	100	70.833	ENSMNEG00000035505	POLR2D	100	90.972	Macaca_nemestrina
ENSACLG00000009919	polr2d	100	70.833	ENSMLEG00000035827	POLR2D	100	90.972	Mandrillus_leucophaeus
ENSACLG00000009919	polr2d	100	69.444	ENSMGAG00000001248	POLR2D	100	90.278	Meleagris_gallopavo
ENSACLG00000009919	polr2d	100	70.139	ENSMAUG00000014518	Polr2d	100	89.583	Mesocricetus_auratus
ENSACLG00000009919	polr2d	100	89.286	ENSMICG00000009931	POLR2D	100	89.583	Microcebus_murinus
ENSACLG00000009919	polr2d	100	71.127	ENSMOCG00000019367	Polr2d	100	87.500	Microtus_ochrogaster
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025026	-	100	76.389	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025030	-	100	76.389	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025036	-	100	76.389	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	55.556	ENSMODG00000025034	-	100	75.694	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025035	-	100	75.694	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	54.861	ENSMODG00000025032	-	100	75.000	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025033	-	100	76.389	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025031	-	100	76.389	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025027	-	100	76.389	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025029	-	100	75.694	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	56.250	ENSMODG00000025028	-	100	76.389	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	70.139	ENSMODG00000018653	-	100	90.972	Monodelphis_domestica
ENSACLG00000009919	polr2d	100	76.389	ENSMALG00000018266	polr2d	100	98.611	Monopterus_albus
ENSACLG00000009919	polr2d	100	70.139	MGP_CAROLIEiJ_G0022066	Polr2d	100	90.278	Mus_caroli
ENSACLG00000009919	polr2d	100	70.139	ENSMUSG00000024258	Polr2d	100	90.278	Mus_musculus
ENSACLG00000009919	polr2d	100	70.139	MGP_PahariEiJ_G0018800	Polr2d	100	90.278	Mus_pahari
ENSACLG00000009919	polr2d	100	70.139	MGP_SPRETEiJ_G0022977	Polr2d	100	90.278	Mus_spretus
ENSACLG00000009919	polr2d	100	70.139	ENSMPUG00000016685	POLR2D	100	90.278	Mustela_putorius_furo
ENSACLG00000009919	polr2d	56	94.915	ENSMLUG00000006862	POLR2D	100	94.915	Myotis_lucifugus
ENSACLG00000009919	polr2d	100	70.139	ENSNGAG00000014862	Polr2d	100	90.278	Nannospalax_galili
ENSACLG00000009919	polr2d	100	70.139	ENSNLEG00000027191	POLR2D	100	90.278	Nomascus_leucogenys
ENSACLG00000009919	polr2d	55	94.017	ENSOPRG00000005327	POLR2D	100	94.017	Ochotona_princeps
ENSACLG00000009919	polr2d	100	69.444	ENSODEG00000005262	POLR2D	100	89.583	Octodon_degus
ENSACLG00000009919	polr2d	100	77.083	ENSONIG00000017290	polr2d	100	99.306	Oreochromis_niloticus
ENSACLG00000009919	polr2d	56	95.763	ENSOANG00000013216	POLR2D	100	95.763	Ornithorhynchus_anatinus
ENSACLG00000009919	polr2d	100	68.056	ENSOCUG00000023403	-	100	88.194	Oryctolagus_cuniculus
ENSACLG00000009919	polr2d	100	68.966	ENSOCUG00000021449	-	100	84.138	Oryctolagus_cuniculus
ENSACLG00000009919	polr2d	100	71.528	ENSORLG00000005266	polr2d	100	93.056	Oryzias_latipes
ENSACLG00000009919	polr2d	100	70.833	ENSORLG00020006647	polr2d	100	92.361	Oryzias_latipes_hni
ENSACLG00000009919	polr2d	100	71.528	ENSORLG00015003222	polr2d	100	93.056	Oryzias_latipes_hsok
ENSACLG00000009919	polr2d	100	72.917	ENSOMEG00000018915	polr2d	100	94.444	Oryzias_melastigma
ENSACLG00000009919	polr2d	100	68.493	ENSOGAG00000017118	POLR2D	100	88.356	Otolemur_garnettii
ENSACLG00000009919	polr2d	100	70.139	ENSOARG00000015995	POLR2D	100	90.278	Ovis_aries
ENSACLG00000009919	polr2d	100	70.139	ENSPPRG00000020222	POLR2D	100	90.278	Panthera_pardus
ENSACLG00000009919	polr2d	100	70.139	ENSPTIG00000018618	POLR2D	100	90.278	Panthera_tigris_altaica
ENSACLG00000009919	polr2d	100	70.139	ENSPTRG00000012436	POLR2D	100	90.278	Pan_troglodytes
ENSACLG00000009919	polr2d	100	70.833	ENSPANG00000018602	POLR2D	100	90.972	Papio_anubis
ENSACLG00000009919	polr2d	100	70.833	ENSPKIG00000012166	polr2d	100	93.056	Paramormyrops_kingsleyae
ENSACLG00000009919	polr2d	56	95.763	ENSPSIG00000002873	POLR2D	100	95.763	Pelodiscus_sinensis
ENSACLG00000009919	polr2d	100	70.139	ENSPEMG00000018244	Polr2d	100	90.278	Peromyscus_maniculatus_bairdii
ENSACLG00000009919	polr2d	100	65.278	ENSPMAG00000005021	polr2d	99	86.806	Petromyzon_marinus
ENSACLG00000009919	polr2d	100	73.611	ENSPFOG00000008969	polr2d	100	95.833	Poecilia_formosa
ENSACLG00000009919	polr2d	100	73.611	ENSPLAG00000017210	polr2d	100	95.833	Poecilia_latipinna
ENSACLG00000009919	polr2d	100	73.611	ENSPMEG00000005160	polr2d	100	95.833	Poecilia_mexicana
ENSACLG00000009919	polr2d	64	69.231	ENSPREG00000021862	polr2d	100	100.000	Poecilia_reticulata
ENSACLG00000009919	polr2d	100	70.139	ENSPPYG00000012759	POLR2D	100	90.278	Pongo_abelii
ENSACLG00000009919	polr2d	100	69.444	ENSPCAG00000001396	POLR2D	100	89.583	Procavia_capensis
ENSACLG00000009919	polr2d	100	89.286	ENSPCOG00000022076	POLR2D	100	89.583	Propithecus_coquereli
ENSACLG00000009919	polr2d	100	69.444	ENSPVAG00000004002	POLR2D	100	89.583	Pteropus_vampyrus
ENSACLG00000009919	polr2d	98	71.831	ENSPNAG00000018246	polr2d	99	94.366	Pygocentrus_nattereri
ENSACLG00000009919	polr2d	100	70.139	ENSRNOG00000016231	Polr2d	100	90.278	Rattus_norvegicus
ENSACLG00000009919	polr2d	100	70.139	ENSRBIG00000039326	POLR2D	100	90.278	Rhinopithecus_bieti
ENSACLG00000009919	polr2d	100	70.139	ENSRROG00000023289	POLR2D	100	90.278	Rhinopithecus_roxellana
ENSACLG00000009919	polr2d	100	69.444	ENSSHAG00000014817	-	100	90.278	Sarcophilus_harrisii
ENSACLG00000009919	polr2d	88	73.282	ENSSFOG00015024204	polr2d	100	93.056	Scleropages_formosus
ENSACLG00000009919	polr2d	100	76.389	ENSSDUG00000006060	polr2d	100	98.611	Seriola_dumerili
ENSACLG00000009919	polr2d	99	75.524	ENSSLDG00000024485	polr2d	99	97.902	Seriola_lalandi_dorsalis
ENSACLG00000009919	polr2d	55	94.017	ENSSARG00000009037	POLR2D	100	94.017	Sorex_araneus
ENSACLG00000009919	polr2d	100	69.444	ENSSPUG00000014915	POLR2D	100	90.278	Sphenodon_punctatus
ENSACLG00000009919	polr2d	100	76.389	ENSSPAG00000013386	polr2d	100	98.611	Stegastes_partitus
ENSACLG00000009919	polr2d	100	70.139	ENSSSCG00000039230	POLR2D	100	90.278	Sus_scrofa
ENSACLG00000009919	polr2d	100	69.444	ENSTGUG00000005773	POLR2D	99	90.278	Taeniopygia_guttata
ENSACLG00000009919	polr2d	100	72.222	ENSTRUG00000004740	polr2d	100	94.444	Takifugu_rubripes
ENSACLG00000009919	polr2d	100	73.611	ENSTNIG00000011210	polr2d	100	95.833	Tetraodon_nigroviridis
ENSACLG00000009919	polr2d	55	94.872	ENSTBEG00000006081	POLR2D	100	94.872	Tupaia_belangeri
ENSACLG00000009919	polr2d	55	94.872	ENSTTRG00000010055	POLR2D	100	94.872	Tursiops_truncatus
ENSACLG00000009919	polr2d	87	72.093	ENSUAMG00000024374	POLR2D	98	94.574	Ursus_americanus
ENSACLG00000009919	polr2d	57	94.167	ENSUMAG00000008280	POLR2D	100	95.192	Ursus_maritimus
ENSACLG00000009919	polr2d	55	94.872	ENSVPAG00000007239	POLR2D	100	94.872	Vicugna_pacos
ENSACLG00000009919	polr2d	100	70.139	ENSVVUG00000008616	POLR2D	100	90.278	Vulpes_vulpes
ENSACLG00000009919	polr2d	100	70.139	ENSXETG00000002955	polr2d	100	89.583	Xenopus_tropicalis
ENSACLG00000009919	polr2d	64	69.231	ENSXCOG00000012668	polr2d	100	100.000	Xiphophorus_couchianus
ENSACLG00000009919	polr2d	64	69.231	ENSXMAG00000014031	polr2d	100	100.000	Xiphophorus_maculatus