EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009988 (Gene tree)
Gene ID: -
Gene Symbol: larp6b
Alias: im:7142825|wu:fa55b04|zgc:162969
Full Name: La ribonucleoprotein domain family%2C member 6b
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 3802 bases
Position: chr18:11742659-11746460
Accession: ZDB-GENE-041008-244
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014670	La	PF05383.17	1.9e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015021	-	1203	-	ENSACLP00000014670	400 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009988's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009988's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009988	larp6b	86	31.156	ENSACLG00000018561	larp6a	56	30.556

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009988	larp6b	90	57.851	ENSAPOG00000003568	-	93	57.542	Acanthochromis_polyacanthus
ENSACLG00000009988	larp6b	92	69.837	ENSACIG00000008349	-	84	69.837	Amphilophus_citrinellus
ENSACLG00000009988	larp6b	90	61.708	ENSAOCG00000004646	larp6b	92	61.219	Amphiprion_ocellaris
ENSACLG00000009988	larp6b	95	59.326	ENSAPEG00000022748	-	91	61.219	Amphiprion_percula
ENSACLG00000009988	larp6b	91	60.656	ENSATEG00000021222	-	91	60.383	Anabas_testudineus
ENSACLG00000009988	larp6b	52	49.091	ENSAMXG00000018956	larp6b	88	36.215	Astyanax_mexicanus
ENSACLG00000009988	larp6b	91	48.378	ENSCVAG00000012145	-	90	48.774	Cyprinodon_variegatus
ENSACLG00000009988	larp6b	88	35.782	ENSDARG00000003968	larp6b	88	36.145	Danio_rerio
ENSACLG00000009988	larp6b	86	36.090	ENSELUG00000021677	larp6b	83	36.090	Esox_lucius
ENSACLG00000009988	larp6b	92	52.000	ENSFHEG00000010409	-	83	51.475	Fundulus_heteroclitus
ENSACLG00000009988	larp6b	90	53.333	ENSGAFG00000020138	-	87	53.333	Gambusia_affinis
ENSACLG00000009988	larp6b	100	98.515	ENSHBUG00000012344	larp6b	100	98.515	Haplochromis_burtoni
ENSACLG00000009988	larp6b	92	34.174	ENSIPUG00000007609	larp6b	90	34.579	Ictalurus_punctatus
ENSACLG00000009988	larp6b	90	58.449	ENSLBEG00000016460	-	97	57.778	Labrus_bergylta
ENSACLG00000009988	larp6b	92	62.973	ENSMAMG00000005509	-	91	62.398	Mastacembelus_armatus
ENSACLG00000009988	larp6b	100	99.750	ENSMZEG00005024390	larp6b	100	99.750	Maylandia_zebra
ENSACLG00000009988	larp6b	96	95.833	ENSNBRG00000012748	larp6b	96	95.312	Neolamprologus_brichardi
ENSACLG00000009988	larp6b	89	53.911	ENSPLAG00000005133	-	94	53.521	Poecilia_latipinna
ENSACLG00000009988	larp6b	89	53.521	ENSPMEG00000019947	-	96	53.521	Poecilia_mexicana
ENSACLG00000009988	larp6b	90	52.778	ENSPREG00000011853	-	85	52.778	Poecilia_reticulata
ENSACLG00000009988	larp6b	89	97.230	ENSPNYG00000007025	larp6b	86	97.230	Pundamilia_nyererei
ENSACLG00000009988	larp6b	89	37.349	ENSPNAG00000023854	larp6b	86	37.260	Pygocentrus_nattereri
ENSACLG00000009988	larp6b	67	64.469	ENSSDUG00000009842	-	82	64.469	Seriola_dumerili
ENSACLG00000009988	larp6b	87	62.393	ENSSLDG00000017081	-	80	61.538	Seriola_lalandi_dorsalis
ENSACLG00000009988	larp6b	89	60.870	ENSSPAG00000014320	-	89	60.590	Stegastes_partitus
ENSACLG00000009988	larp6b	90	53.073	ENSXCOG00000018917	-	91	53.073	Xiphophorus_couchianus
ENSACLG00000009988	larp6b	90	53.073	ENSXMAG00000025734	-	92	53.073	Xiphophorus_maculatus