EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000009990 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 1340 bases
Position: chr20:1367397-1368736
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014667	RVT_1	PF00078.27	1.4e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015018	-	1340	-	ENSACLP00000014667	372 (aa)	-	-

Gene Model

Click here to download ENSACLG00000009990's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000009990's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000009990	-	77	98.947	ENSACLG00000021049	-	78	98.947
ENSACLG00000009990	-	66	30.081	ENSACLG00000011319	-	61	30.081
ENSACLG00000009990	-	77	96.491	ENSACLG00000000577	-	55	96.491
ENSACLG00000009990	-	56	30.622	ENSACLG00000006900	-	58	30.622

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000009990	-	72	37.037	ENSAPOG00000010356	-	72	37.037	Acanthochromis_polyacanthus
ENSACLG00000009990	-	70	31.660	ENSAPEG00000017357	-	59	31.660	Amphiprion_percula
ENSACLG00000009990	-	77	79.298	ENSAPEG00000001652	-	79	79.298	Amphiprion_percula
ENSACLG00000009990	-	100	79.301	ENSAPEG00000009254	-	63	79.570	Amphiprion_percula
ENSACLG00000009990	-	66	38.153	ENSATEG00000004181	-	80	38.956	Anabas_testudineus
ENSACLG00000009990	-	97	34.153	ENSCSEG00000008847	-	56	34.973	Cynoglossus_semilaevis
ENSACLG00000009990	-	96	34.341	ENSCSEG00000016291	-	56	35.068	Cynoglossus_semilaevis
ENSACLG00000009990	-	60	32.627	ENSEBUG00000003807	-	89	33.051	Eptatretus_burgeri
ENSACLG00000009990	-	77	91.228	ENSHBUG00000016469	-	81	91.228	Haplochromis_burtoni
ENSACLG00000009990	-	78	32.558	ENSHCOG00000002713	-	73	32.558	Hippocampus_comes
ENSACLG00000009990	-	76	67.606	ENSIPUG00000022680	-	65	67.606	Ictalurus_punctatus
ENSACLG00000009990	-	73	36.861	ENSLACG00000009128	-	80	36.861	Latimeria_chalumnae
ENSACLG00000009990	-	54	37.255	ENSLACG00000010360	-	62	37.255	Latimeria_chalumnae
ENSACLG00000009990	-	66	39.200	ENSLACG00000006699	-	53	39.200	Latimeria_chalumnae
ENSACLG00000009990	-	91	31.250	ENSLOCG00000016955	-	55	31.250	Lepisosteus_oculatus
ENSACLG00000009990	-	77	97.193	ENSMZEG00005027054	-	99	97.193	Maylandia_zebra
ENSACLG00000009990	-	68	96.429	ENSMZEG00005004417	-	69	96.429	Maylandia_zebra
ENSACLG00000009990	-	69	95.720	ENSMZEG00005001407	-	74	95.720	Maylandia_zebra
ENSACLG00000009990	-	77	77.193	ENSMALG00000007492	-	70	77.193	Monopterus_albus
ENSACLG00000009990	-	69	34.231	ENSNBRG00000002521	-	68	34.231	Neolamprologus_brichardi
ENSACLG00000009990	-	68	77.866	ENSORLG00000029682	-	73	77.866	Oryzias_latipes
ENSACLG00000009990	-	100	79.032	ENSORLG00000015190	-	78	79.032	Oryzias_latipes
ENSACLG00000009990	-	99	38.684	ENSORLG00020005057	-	50	38.684	Oryzias_latipes_hni
ENSACLG00000009990	-	69	78.599	ENSORLG00020012943	-	72	78.599	Oryzias_latipes_hni
ENSACLG00000009990	-	100	76.075	ENSORLG00015001080	-	91	76.075	Oryzias_latipes_hsok
ENSACLG00000009990	-	96	36.088	ENSORLG00015006293	-	51	36.915	Oryzias_latipes_hsok
ENSACLG00000009990	-	99	39.211	ENSORLG00015011564	-	75	39.211	Oryzias_latipes_hsok
ENSACLG00000009990	-	100	70.712	ENSPKIG00000009130	-	50	70.712	Paramormyrops_kingsleyae
ENSACLG00000009990	-	77	77.544	ENSPKIG00000021701	-	60	77.544	Paramormyrops_kingsleyae
ENSACLG00000009990	-	71	69.004	ENSPKIG00000022569	-	73	69.004	Paramormyrops_kingsleyae
ENSACLG00000009990	-	75	33.798	ENSPSIG00000001099	-	70	33.798	Pelodiscus_sinensis
ENSACLG00000009990	-	59	94.954	ENSPNYG00000007962	-	65	94.954	Pundamilia_nyererei
ENSACLG00000009990	-	64	37.759	ENSPNAG00000013035	-	81	37.759	Pygocentrus_nattereri
ENSACLG00000009990	-	58	67.580	ENSPNAG00000021600	-	70	67.580	Pygocentrus_nattereri
ENSACLG00000009990	-	86	35.455	ENSPNAG00000002794	-	82	35.455	Pygocentrus_nattereri
ENSACLG00000009990	-	52	38.462	ENSPNAG00000009857	-	56	38.462	Pygocentrus_nattereri
ENSACLG00000009990	-	72	72.862	ENSSFOG00015012021	-	75	72.862	Scleropages_formosus
ENSACLG00000009990	-	99	70.620	ENSSMAG00000002801	-	78	70.620	Scophthalmus_maximus
ENSACLG00000009990	-	77	80.351	ENSXMAG00000028373	-	90	80.351	Xiphophorus_maculatus
ENSACLG00000009990	-	60	82.960	ENSXMAG00000021563	-	71	82.960	Xiphophorus_maculatus