EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000010029 (Gene tree)
Gene ID: 113030750
Gene Symbol: gar1
Alias: nola1|zgc:56086
Full Name: GAR1 ribonucleoprotein
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4268 bases
Position: chr2:5402068-5406335
Accession: 113030750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014715	Gar1	PF04410.14	2.4e-39	1	1
ENSACLP00000014724	Gar1	PF04410.14	2.8e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015075	-	2199	-	ENSACLP00000014724	237 (aa)	-	-
ENSACLT00000015066	-	2111	-	ENSACLP00000014715	223 (aa)	XP_026038230	UPI00032A0FCD

Gene Model

Click here to download ENSACLG00000010029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000010029's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000010029	gar1	66	84.354	ENSACAG00000010031	GAR1	50	91.509	Anolis_carolinensis
ENSACLG00000010029	gar1	63	67.857	ENSCHIG00000011049	-	55	79.091	Capra_hircus
ENSACLG00000010029	gar1	56	92.800	ENSCGRG00000010165	-	92	92.800	Cricetulus_griseus_crigri
ENSACLG00000010029	gar1	50	90.991	ENSDORG00000000482	Gar1	51	90.909	Dipodomys_ordii
ENSACLG00000010029	gar1	61	52.206	ENSFCAG00000025841	-	52	58.182	Felis_catus
ENSACLG00000010029	gar1	64	87.413	ENSFHEG00000008068	gar1	51	96.364	Fundulus_heteroclitus
ENSACLG00000010029	gar1	64	81.119	ENSGALG00000020164	GAR1	63	85.401	Gallus_gallus
ENSACLG00000010029	gar1	71	94.643	ENSHBUG00000023860	gar1	86	88.235	Haplochromis_burtoni
ENSACLG00000010029	gar1	74	80.000	ENSIPUG00000003194	gar1	52	95.455	Ictalurus_punctatus
ENSACLG00000010029	gar1	50	96.396	ENSKMAG00000010402	gar1	52	97.273	Kryptolebias_marmoratus
ENSACLG00000010029	gar1	100	100.000	ENSMZEG00005001281	gar1	100	100.000	Maylandia_zebra
ENSACLG00000010029	gar1	50	90.179	ENSMICG00000003326	GAR1	51	90.909	Microcebus_murinus
ENSACLG00000010029	gar1	58	91.304	ENSMMOG00000004156	gar1	53	95.370	Mola_mola
ENSACLG00000010029	gar1	51	86.842	ENSMODG00000005897	GAR1	71	76.471	Monodelphis_domestica
ENSACLG00000010029	gar1	61	85.926	MGP_CAROLIEiJ_G0025627	Gar1	99	90.361	Mus_caroli
ENSACLG00000010029	gar1	76	95.000	ENSNBRG00000014828	gar1	79	90.110	Neolamprologus_brichardi
ENSACLG00000010029	gar1	65	88.356	ENSORLG00000020583	gar1	50	97.273	Oryzias_latipes
ENSACLG00000010029	gar1	65	88.356	ENSORLG00020008602	gar1	50	97.273	Oryzias_latipes_hni
ENSACLG00000010029	gar1	65	88.356	ENSORLG00015017643	gar1	50	97.273	Oryzias_latipes_hsok
ENSACLG00000010029	gar1	65	85.517	ENSPPAG00000014081	GAR1	66	86.713	Pan_paniscus
ENSACLG00000010029	gar1	65	76.991	ENSPTRG00000049340	-	51	75.701	Pan_troglodytes
ENSACLG00000010029	gar1	67	65.854	ENSPANG00000033062	-	72	69.318	Papio_anubis
ENSACLG00000010029	gar1	65	80.690	ENSPSIG00000002970	GAR1	50	90.909	Pelodiscus_sinensis
ENSACLG00000010029	gar1	51	86.842	ENSPCIG00000018912	GAR1	62	76.190	Phascolarctos_cinereus
ENSACLG00000010029	gar1	64	80.420	ENSPFOG00000024155	gar1	52	95.455	Poecilia_formosa
ENSACLG00000010029	gar1	64	80.420	ENSPLAG00000015056	gar1	52	95.455	Poecilia_latipinna
ENSACLG00000010029	gar1	64	81.119	ENSPMEG00000009320	gar1	53	96.364	Poecilia_mexicana
ENSACLG00000010029	gar1	77	95.604	ENSPNYG00000020926	gar1	75	90.659	Pundamilia_nyererei
ENSACLG00000010029	gar1	50	75.893	ENSRBIG00000042411	-	53	75.455	Rhinopithecus_bieti
ENSACLG00000010029	gar1	50	75.893	ENSRROG00000044348	-	53	75.455	Rhinopithecus_roxellana
ENSACLG00000010029	gar1	57	88.889	ENSSLDG00000023264	gar1	52	98.182	Seriola_lalandi_dorsalis
ENSACLG00000010029	gar1	54	86.719	ENSSPUG00000008707	GAR1	61	91.818	Sphenodon_punctatus
ENSACLG00000010029	gar1	64	89.510	ENSVVUG00000017612	GAR1	67	88.356	Vulpes_vulpes