EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000010184 (Gene tree)
Gene ID: 113023193
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3486 bases
Position: chr6:4148498-4151983
Accession: 113023193
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000014949	RRM_1	PF00076.22	1.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015301	-	2152	-	ENSACLP00000014949	261 (aa)	XP_026025003	UPI000E414B5A

Gene Model

Click here to download ENSACLG00000010184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000010184's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000010184	-	100	52.669	ENSACLG00000008432	alyref	100	54.610

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000010184	-	100	71.863	ENSAPOG00000000183	-	100	71.103	Acanthochromis_polyacanthus
ENSACLG00000010184	-	98	53.623	ENSACIG00000006351	alyref	97	54.874	Amphilophus_citrinellus
ENSACLG00000010184	-	100	77.122	ENSACIG00000020351	-	100	77.860	Amphilophus_citrinellus
ENSACLG00000010184	-	100	70.722	ENSAOCG00000019305	-	100	70.722	Amphiprion_ocellaris
ENSACLG00000010184	-	100	55.000	ENSAOCG00000014012	alyref	100	56.071	Amphiprion_ocellaris
ENSACLG00000010184	-	100	55.000	ENSAPEG00000014603	alyref	100	56.071	Amphiprion_percula
ENSACLG00000010184	-	100	71.483	ENSAPEG00000013527	-	100	70.342	Amphiprion_percula
ENSACLG00000010184	-	100	67.925	ENSATEG00000000382	-	100	67.547	Anabas_testudineus
ENSACLG00000010184	-	100	52.098	ENSATEG00000004307	alyref	100	53.333	Anabas_testudineus
ENSACLG00000010184	-	52	60.584	ENSAPLG00000014745	-	97	62.774	Anas_platyrhynchos
ENSACLG00000010184	-	100	54.196	ENSAMXG00000007359	alyref	100	53.472	Astyanax_mexicanus
ENSACLG00000010184	-	68	47.027	ENSCING00000013568	-	98	42.222	Ciona_intestinalis
ENSACLG00000010184	-	98	43.396	ENSCSAVG00000003324	-	98	44.444	Ciona_savignyi
ENSACLG00000010184	-	100	55.197	ENSCSEG00000017800	alyref	100	55.755	Cynoglossus_semilaevis
ENSACLG00000010184	-	100	55.235	ENSCVAG00000014869	alyref	100	54.122	Cyprinodon_variegatus
ENSACLG00000010184	-	100	62.121	ENSCVAG00000007789	-	100	62.500	Cyprinodon_variegatus
ENSACLG00000010184	-	100	57.292	ENSDARG00000077732	alyref	100	56.794	Danio_rerio
ENSACLG00000010184	-	99	39.322	FBgn0010774	Ref1	67	36.279	Drosophila_melanogaster
ENSACLG00000010184	-	100	42.912	ENSEBUG00000006305	alyref	100	42.697	Eptatretus_burgeri
ENSACLG00000010184	-	98	46.667	ENSEBUG00000008253	alyref	96	41.489	Eptatretus_burgeri
ENSACLG00000010184	-	100	54.448	ENSELUG00000017178	alyref	100	53.929	Esox_lucius
ENSACLG00000010184	-	100	61.111	ENSELUG00000008849	-	100	60.741	Esox_lucius
ENSACLG00000010184	-	60	62.577	ENSFALG00000011923	-	94	64.935	Ficedula_albicollis
ENSACLG00000010184	-	100	53.957	ENSFHEG00000019426	alyref	100	55.755	Fundulus_heteroclitus
ENSACLG00000010184	-	100	62.879	ENSFHEG00000004698	-	100	64.015	Fundulus_heteroclitus
ENSACLG00000010184	-	73	63.776	ENSGMOG00000013122	-	100	60.406	Gadus_morhua
ENSACLG00000010184	-	100	51.812	ENSGMOG00000009882	alyref	100	51.449	Gadus_morhua
ENSACLG00000010184	-	100	53.310	ENSGAFG00000006014	alyref	100	53.169	Gambusia_affinis
ENSACLG00000010184	-	100	60.606	ENSGAFG00000007573	-	100	58.333	Gambusia_affinis
ENSACLG00000010184	-	100	98.113	ENSHBUG00000001454	-	100	98.113	Haplochromis_burtoni
ENSACLG00000010184	-	100	52.669	ENSHBUG00000020196	alyref	100	54.610	Haplochromis_burtoni
ENSACLG00000010184	-	98	61.538	ENSHCOG00000012825	-	94	60.311	Hippocampus_comes
ENSACLG00000010184	-	100	57.746	ENSIPUG00000009469	alyref	99	56.584	Ictalurus_punctatus
ENSACLG00000010184	-	79	53.521	ENSSTOG00000016570	-	99	47.059	Ictidomys_tridecemlineatus
ENSACLG00000010184	-	100	65.152	ENSKMAG00000006462	-	100	64.773	Kryptolebias_marmoratus
ENSACLG00000010184	-	100	53.381	ENSKMAG00000008912	alyref	100	56.228	Kryptolebias_marmoratus
ENSACLG00000010184	-	98	65.267	ENSLBEG00000012930	-	99	65.019	Labrus_bergylta
ENSACLG00000010184	-	100	64.769	ENSLBEG00000005387	-	100	64.413	Labrus_bergylta
ENSACLG00000010184	-	97	55.118	ENSLBEG00000023118	alyref	88	57.480	Labrus_bergylta
ENSACLG00000010184	-	83	56.364	ENSLOCG00000013879	alyref	88	55.856	Lepisosteus_oculatus
ENSACLG00000010184	-	100	55.160	ENSMAMG00000003034	alyref	100	54.286	Mastacembelus_armatus
ENSACLG00000010184	-	100	66.920	ENSMAMG00000005464	-	100	66.540	Mastacembelus_armatus
ENSACLG00000010184	-	100	52.669	ENSMZEG00005008639	alyref	100	54.610	Maylandia_zebra
ENSACLG00000010184	-	100	98.851	ENSMZEG00005012096	-	100	98.851	Maylandia_zebra
ENSACLG00000010184	-	98	53.846	ENSMMOG00000012458	alyref	96	55.636	Mola_mola
ENSACLG00000010184	-	99	54.444	ENSMMOG00000007032	-	100	52.612	Mola_mola
ENSACLG00000010184	-	100	68.773	ENSMALG00000006054	-	100	65.672	Monopterus_albus
ENSACLG00000010184	-	97	43.599	ENSMLUG00000022467	-	70	48.792	Myotis_lucifugus
ENSACLG00000010184	-	76	50.754	ENSMLUG00000028605	-	74	49.770	Myotis_lucifugus
ENSACLG00000010184	-	100	48.464	ENSMLUG00000014372	-	100	47.887	Myotis_lucifugus
ENSACLG00000010184	-	100	48.410	ENSMLUG00000004098	-	100	47.653	Myotis_lucifugus
ENSACLG00000010184	-	97	44.718	ENSMLUG00000030671	-	68	51.515	Myotis_lucifugus
ENSACLG00000010184	-	97	44.444	ENSMLUG00000022178	-	69	51.256	Myotis_lucifugus
ENSACLG00000010184	-	100	48.763	ENSMLUG00000006521	-	100	50.355	Myotis_lucifugus
ENSACLG00000010184	-	97	42.857	ENSMLUG00000009247	-	98	44.161	Myotis_lucifugus
ENSACLG00000010184	-	100	54.406	ENSNGAG00000022014	-	100	55.133	Nannospalax_galili
ENSACLG00000010184	-	100	52.297	ENSNBRG00000001747	alyref	100	53.521	Neolamprologus_brichardi
ENSACLG00000010184	-	100	98.467	ENSNBRG00000017460	-	100	98.467	Neolamprologus_brichardi
ENSACLG00000010184	-	100	95.437	ENSONIG00000003296	-	100	95.437	Oreochromis_niloticus
ENSACLG00000010184	-	100	52.448	ENSONIG00000019434	alyref	100	53.497	Oreochromis_niloticus
ENSACLG00000010184	-	98	57.377	ENSORLG00000001620	-	88	54.934	Oryzias_latipes
ENSACLG00000010184	-	100	49.660	ENSORLG00020011942	alyref	100	53.191	Oryzias_latipes_hni
ENSACLG00000010184	-	99	67.681	ENSORLG00020015673	-	99	64.639	Oryzias_latipes_hni
ENSACLG00000010184	-	99	70.076	ENSORLG00015015143	-	99	67.300	Oryzias_latipes_hsok
ENSACLG00000010184	-	100	50.000	ENSORLG00015022664	alyref	100	53.214	Oryzias_latipes_hsok
ENSACLG00000010184	-	100	65.909	ENSOMEG00000007158	-	99	63.498	Oryzias_melastigma
ENSACLG00000010184	-	100	53.929	ENSOMEG00000019176	alyref	100	54.676	Oryzias_melastigma
ENSACLG00000010184	-	73	60.000	ENSPPAG00000036403	-	67	58.947	Pan_paniscus
ENSACLG00000010184	-	100	54.770	ENSPKIG00000007070	alyref	100	54.064	Paramormyrops_kingsleyae
ENSACLG00000010184	-	98	54.815	ENSPKIG00000006233	-	80	55.303	Paramormyrops_kingsleyae
ENSACLG00000010184	-	97	52.313	ENSPMGG00000016600	alyref	89	56.458	Periophthalmus_magnuspinnatus
ENSACLG00000010184	-	66	59.770	ENSPMGG00000012994	-	93	58.960	Periophthalmus_magnuspinnatus
ENSACLG00000010184	-	100	54.167	ENSPEMG00000016628	-	100	52.490	Peromyscus_maniculatus_bairdii
ENSACLG00000010184	-	100	54.196	ENSPFOG00000022825	alyref	99	53.873	Poecilia_formosa
ENSACLG00000010184	-	100	61.742	ENSPFOG00000017094	-	100	62.500	Poecilia_formosa
ENSACLG00000010184	-	100	55.088	ENSPLAG00000006948	alyref	100	54.064	Poecilia_latipinna
ENSACLG00000010184	-	100	61.742	ENSPLAG00000014380	-	100	62.500	Poecilia_latipinna
ENSACLG00000010184	-	100	61.742	ENSPMEG00000023039	-	100	62.500	Poecilia_mexicana
ENSACLG00000010184	-	100	54.196	ENSPMEG00000003547	alyref	100	53.873	Poecilia_mexicana
ENSACLG00000010184	-	100	60.755	ENSPREG00000003649	-	100	61.509	Poecilia_reticulata
ENSACLG00000010184	-	100	55.088	ENSPREG00000015795	alyref	100	54.064	Poecilia_reticulata
ENSACLG00000010184	-	98	95.312	ENSPNYG00000002879	-	98	95.312	Pundamilia_nyererei
ENSACLG00000010184	-	100	52.669	ENSPNYG00000017498	alyref	100	54.610	Pundamilia_nyererei
ENSACLG00000010184	-	100	50.847	ENSPNAG00000002531	alyref	100	51.724	Pygocentrus_nattereri
ENSACLG00000010184	-	75	59.391	ENSSBOG00000030924	-	84	58.376	Saimiri_boliviensis_boliviensis
ENSACLG00000010184	-	99	42.321	ENSSHAG00000012866	-	73	47.573	Sarcophilus_harrisii
ENSACLG00000010184	-	99	47.104	ENSSHAG00000000609	-	98	45.098	Sarcophilus_harrisii
ENSACLG00000010184	-	83	60.000	ENSSFOG00015003923	alyref	72	59.633	Scleropages_formosus
ENSACLG00000010184	-	73	58.376	ENSSFOG00015003678	alyref	83	59.067	Scleropages_formosus
ENSACLG00000010184	-	100	55.124	ENSSMAG00000009283	alyref	100	55.830	Scophthalmus_maximus
ENSACLG00000010184	-	100	66.045	ENSSMAG00000011169	-	100	67.910	Scophthalmus_maximus
ENSACLG00000010184	-	100	55.000	ENSSDUG00000016158	alyref	100	56.429	Seriola_dumerili
ENSACLG00000010184	-	100	52.837	ENSSLDG00000017803	alyref	100	55.160	Seriola_lalandi_dorsalis
ENSACLG00000010184	-	98	71.429	ENSSPAG00000017028	-	96	73.643	Stegastes_partitus
ENSACLG00000010184	-	100	62.500	ENSTRUG00000003051	-	100	60.294	Takifugu_rubripes
ENSACLG00000010184	-	100	62.642	ENSTNIG00000014136	-	100	57.197	Tetraodon_nigroviridis
ENSACLG00000010184	-	100	49.135	ENSTNIG00000011595	alyref	100	53.933	Tetraodon_nigroviridis
ENSACLG00000010184	-	76	59.596	ENSVVUG00000000272	-	82	58.883	Vulpes_vulpes
ENSACLG00000010184	-	98	52.650	ENSXCOG00000018047	alyref	98	52.500	Xiphophorus_couchianus
ENSACLG00000010184	-	100	62.121	ENSXMAG00000018086	-	100	62.500	Xiphophorus_maculatus
ENSACLG00000010184	-	98	52.650	ENSXMAG00000012218	alyref	98	52.500	Xiphophorus_maculatus