EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000010281 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11044 bases
Position: chr16:34969463-34980506
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000015092	Nop52	PF05997.12	1.9e-63	1	1
ENSACLP00000015094	Nop52	PF05997.12	1.9e-63	1	1
ENSACLP00000015103	Nop52	PF05997.12	1.9e-63	1	1
ENSACLP00000015111	Nop52	PF05997.12	5.1e-41	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015466	-	1594	-	ENSACLP00000015111	339 (aa)	-	-
ENSACLT00000015449	-	941	-	ENSACLP00000015094	253 (aa)	-	-
ENSACLT00000015458	-	1336	-	ENSACLP00000015103	253 (aa)	-	-
ENSACLT00000015447	-	1279	-	ENSACLP00000015092	253 (aa)	-	-

Gene Model

Click here to download ENSACLG00000010281's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000010281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000010281	-	77	55.330	ENSG00000160214	RRP1	76	58.824	Homo_sapiens
ENSACLG00000010281	-	78	75.879	ENSAOCG00000017894	-	53	75.879	Amphiprion_ocellaris
ENSACLG00000010281	-	81	53.555	ENSCSAG00000007936	RRP1	64	53.555	Chlorocebus_sabaeus
ENSACLG00000010281	-	77	43.842	ENSCING00000003304	-	50	43.842	Ciona_intestinalis
ENSACLG00000010281	-	78	56.000	ENSCGRG00001023882	-	60	67.647	Cricetulus_griseus_chok1gshd
ENSACLG00000010281	-	75	72.251	ENSCVAG00000017568	-	50	72.251	Cyprinodon_variegatus
ENSACLG00000010281	-	79	65.196	ENSELUG00000015885	-	54	59.000	Esox_lucius
ENSACLG00000010281	-	75	68.229	ENSMMOG00000019175	rrp1	51	67.526	Mola_mola
ENSACLG00000010281	-	78	72.000	ENSMALG00000010310	rrp1	52	72.000	Monopterus_albus
ENSACLG00000010281	-	79	55.172	MGP_CAROLIEiJ_G0021376	Rrp1b	58	63.768	Mus_caroli
ENSACLG00000010281	-	79	54.680	ENSMUSG00000058392	Rrp1b	58	65.217	Mus_musculus
ENSACLG00000010281	-	78	54.500	MGP_PahariEiJ_G0023695	Rrp1b	58	64.706	Mus_pahari
ENSACLG00000010281	-	79	55.665	MGP_SPRETEiJ_G0022290	Rrp1b	58	65.217	Mus_spretus
ENSACLG00000010281	-	77	49.490	ENSOPRG00000001319	RRP1	56	49.490	Ochotona_princeps
ENSACLG00000010281	-	77	54.315	ENSOANG00000006472	-	53	54.315	Ornithorhynchus_anatinus
ENSACLG00000010281	-	74	54.040	ENSPMGG00000007512	-	51	54.040	Periophthalmus_magnuspinnatus
ENSACLG00000010281	-	77	44.670	ENSPCAG00000008370	-	54	44.670	Procavia_capensis
ENSACLG00000010281	-	64	30.337	YDR087C	-	63	30.337	Saccharomyces_cerevisiae
ENSACLG00000010281	-	64	55.556	ENSSHAG00000010304	-	50	55.556	Sarcophilus_harrisii
ENSACLG00000010281	-	78	75.000	ENSSMAG00000016847	-	50	75.000	Scophthalmus_maximus
ENSACLG00000010281	-	78	72.500	ENSTRUG00000017592	rrp1	56	72.500	Takifugu_rubripes
ENSACLG00000010281	-	71	73.481	ENSXCOG00000008312	-	68	73.481	Xiphophorus_couchianus