EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000010511 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171482
Alias: -
Full Name: zgc:171482
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 23139 bases
Position: chr13:14506844-14529982
Accession: ZDB-GENE-080204-84
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000015416	zf-met	PF12874.7	1.1e-14	1	2
ENSACLP00000015416	zf-met	PF12874.7	1.1e-14	2	2
ENSACLP00000015416	zf-C2H2_jaz	PF12171.8	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015779	-	435	-	ENSACLP00000015416	144 (aa)	-	-

Gene Model

Click here to download ENSACLG00000010511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000010511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000010511	zgc:171482	93	69.231	ENSACLG00000005038	zmat4a	89	69.231

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000010511	zgc:171482	91	94.656	ENSAPOG00000019970	zgc:171482	79	94.656	Acanthochromis_polyacanthus
ENSACLG00000010511	zgc:171482	81	98.291	ENSACIG00000021512	zgc:171482	87	98.291	Amphilophus_citrinellus
ENSACLG00000010511	zgc:171482	91	93.130	ENSAOCG00000000751	zgc:171482	96	93.130	Amphiprion_ocellaris
ENSACLG00000010511	zgc:171482	94	93.382	ENSAPEG00000014154	zgc:171482	98	93.382	Amphiprion_percula
ENSACLG00000010511	zgc:171482	80	96.522	ENSATEG00000001371	zgc:171482	79	94.215	Anabas_testudineus
ENSACLG00000010511	zgc:171482	81	94.017	ENSAMXG00000002299	zgc:171482	89	94.017	Astyanax_mexicanus
ENSACLG00000010511	zgc:171482	99	80.282	ENSCSEG00000006509	zgc:171482	93	80.282	Cynoglossus_semilaevis
ENSACLG00000010511	zgc:171482	84	96.694	ENSCVAG00000013606	zgc:171482	80	96.694	Cyprinodon_variegatus
ENSACLG00000010511	zgc:171482	85	89.344	ENSDARG00000074415	zgc:171482	91	89.344	Danio_rerio
ENSACLG00000010511	zgc:171482	98	84.397	ENSELUG00000021817	zgc:171482	99	84.397	Esox_lucius
ENSACLG00000010511	zgc:171482	95	63.768	ENSELUG00000017517	-	97	59.333	Esox_lucius
ENSACLG00000010511	zgc:171482	88	95.238	ENSFHEG00000002233	zgc:171482	90	95.238	Fundulus_heteroclitus
ENSACLG00000010511	zgc:171482	87	92.800	ENSGMOG00000010508	zgc:171482	79	92.800	Gadus_morhua
ENSACLG00000010511	zgc:171482	83	98.319	ENSGAFG00000009398	zgc:171482	93	84.507	Gambusia_affinis
ENSACLG00000010511	zgc:171482	87	95.200	ENSGACG00000007680	zgc:171482	80	95.200	Gasterosteus_aculeatus
ENSACLG00000010511	zgc:171482	91	98.473	ENSHBUG00000023289	zgc:171482	98	98.473	Haplochromis_burtoni
ENSACLG00000010511	zgc:171482	89	88.462	ENSHCOG00000018086	zgc:171482	97	88.462	Hippocampus_comes
ENSACLG00000010511	zgc:171482	81	94.872	ENSIPUG00000000361	zgc:171482	85	94.872	Ictalurus_punctatus
ENSACLG00000010511	zgc:171482	87	95.200	ENSKMAG00000005077	zgc:171482	68	95.200	Kryptolebias_marmoratus
ENSACLG00000010511	zgc:171482	90	91.473	ENSLBEG00000023823	zgc:171482	92	91.473	Labrus_bergylta
ENSACLG00000010511	zgc:171482	81	92.308	ENSLOCG00000008863	zgc:171482	77	92.308	Lepisosteus_oculatus
ENSACLG00000010511	zgc:171482	91	93.130	ENSMAMG00000001031	zgc:171482	82	93.130	Mastacembelus_armatus
ENSACLG00000010511	zgc:171482	83	94.118	ENSMZEG00005027721	zgc:171482	79	94.118	Maylandia_zebra
ENSACLG00000010511	zgc:171482	91	94.656	ENSMMOG00000010523	zgc:171482	100	94.656	Mola_mola
ENSACLG00000010511	zgc:171482	93	87.050	ENSMALG00000017883	zgc:171482	80	87.050	Monopterus_albus
ENSACLG00000010511	zgc:171482	81	98.276	ENSNBRG00000021035	zgc:171482	87	98.276	Neolamprologus_brichardi
ENSACLG00000010511	zgc:171482	87	100.000	ENSONIG00000018365	zgc:171482	78	100.000	Oreochromis_niloticus
ENSACLG00000010511	zgc:171482	94	92.593	ENSORLG00000007607	zgc:171482	95	92.593	Oryzias_latipes
ENSACLG00000010511	zgc:171482	94	91.852	ENSORLG00020003563	zgc:171482	95	91.852	Oryzias_latipes_hni
ENSACLG00000010511	zgc:171482	94	92.593	ENSORLG00015008552	zgc:171482	95	92.593	Oryzias_latipes_hsok
ENSACLG00000010511	zgc:171482	94	91.852	ENSOMEG00000003526	zgc:171482	95	91.852	Oryzias_melastigma
ENSACLG00000010511	zgc:171482	81	95.690	ENSPKIG00000015911	-	81	95.690	Paramormyrops_kingsleyae
ENSACLG00000010511	zgc:171482	76	90.909	ENSPKIG00000016244	zgc:171482	84	87.288	Paramormyrops_kingsleyae
ENSACLG00000010511	zgc:171482	87	94.400	ENSPMGG00000020230	zgc:171482	82	94.400	Periophthalmus_magnuspinnatus
ENSACLG00000010511	zgc:171482	87	96.000	ENSPFOG00000001974	zgc:171482	78	96.000	Poecilia_formosa
ENSACLG00000010511	zgc:171482	89	93.750	ENSPLAG00000003327	zgc:171482	79	93.750	Poecilia_latipinna
ENSACLG00000010511	zgc:171482	88	95.276	ENSPMEG00000004988	zgc:171482	89	85.034	Poecilia_mexicana
ENSACLG00000010511	zgc:171482	88	96.032	ENSPREG00000019241	zgc:171482	91	96.032	Poecilia_reticulata
ENSACLG00000010511	zgc:171482	100	100.000	ENSPNYG00000007773	zgc:171482	100	100.000	Pundamilia_nyererei
ENSACLG00000010511	zgc:171482	80	93.913	ENSPNAG00000007619	zgc:171482	79	89.600	Pygocentrus_nattereri
ENSACLG00000010511	zgc:171482	90	84.615	ENSSFOG00015021238	zgc:171482	78	91.379	Scleropages_formosus
ENSACLG00000010511	zgc:171482	90	83.721	ENSSFOG00015016149	zgc:171482	98	83.721	Scleropages_formosus
ENSACLG00000010511	zgc:171482	94	90.441	ENSSMAG00000002715	zgc:171482	87	90.441	Scophthalmus_maximus
ENSACLG00000010511	zgc:171482	88	94.488	ENSSDUG00000008773	zgc:171482	89	94.488	Seriola_dumerili
ENSACLG00000010511	zgc:171482	88	94.488	ENSSLDG00000019510	zgc:171482	89	94.488	Seriola_lalandi_dorsalis
ENSACLG00000010511	zgc:171482	86	96.774	ENSSPAG00000013724	zgc:171482	98	96.774	Stegastes_partitus
ENSACLG00000010511	zgc:171482	90	90.698	ENSTRUG00000005705	zgc:171482	76	90.698	Takifugu_rubripes
ENSACLG00000010511	zgc:171482	91	68.702	ENSTNIG00000008679	zgc:171482	80	68.702	Tetraodon_nigroviridis
ENSACLG00000010511	zgc:171482	76	76.786	ENSXETG00000013525	zmat4	76	76.786	Xenopus_tropicalis
ENSACLG00000010511	zgc:171482	83	87.500	ENSXMAG00000002641	zgc:171482	93	75.524	Xiphophorus_maculatus