EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000010521 (Gene tree)
Gene ID: -
Gene Symbol: mrps18c
Alias: si:ch211-85e10.6
Full Name: mitochondrial ribosomal protein S18C
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2969 bases
Position: chr7:38576077-38579045
Accession: ZDB-GENE-060503-609
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000015455	Ribosomal_S18	PF01084.20	2.9e-21	1	1
ENSACLP00000015460	Ribosomal_S18	PF01084.20	3.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015817	-	309	-	ENSACLP00000015455	102 (aa)	-	-
ENSACLT00000015822	-	372	-	ENSACLP00000015460	123 (aa)	-	-

Gene Model

Click here to download ENSACLG00000010521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000010521's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000010521	mrps18c	91	89.247	ENSAPOG00000019045	mrps18c	72	89.247	Acanthochromis_polyacanthus
ENSACLG00000010521	mrps18c	100	88.235	ENSACIG00000020253	mrps18c	100	88.235	Amphilophus_citrinellus
ENSACLG00000010521	mrps18c	91	90.323	ENSAOCG00000014338	mrps18c	72	90.323	Amphiprion_ocellaris
ENSACLG00000010521	mrps18c	91	90.323	ENSAPEG00000022956	mrps18c	72	90.323	Amphiprion_percula
ENSACLG00000010521	mrps18c	85	91.954	ENSAPEG00000023068	-	96	82.353	Amphiprion_percula
ENSACLG00000010521	mrps18c	91	83.871	ENSATEG00000023417	mrps18c	72	83.871	Anabas_testudineus
ENSACLG00000010521	mrps18c	87	67.416	ENSAPLG00000012544	-	99	62.745	Anas_platyrhynchos
ENSACLG00000010521	mrps18c	89	79.121	ENSAMXG00000012238	mrps18c	99	78.571	Astyanax_mexicanus
ENSACLG00000010521	mrps18c	87	68.539	ENSCPBG00000007783	-	55	68.539	Chrysemys_picta_bellii
ENSACLG00000010521	mrps18c	89	83.516	ENSCSEG00000000711	mrps18c	91	61.616	Cynoglossus_semilaevis
ENSACLG00000010521	mrps18c	90	83.696	ENSCVAG00000020169	mrps18c	72	83.696	Cyprinodon_variegatus
ENSACLG00000010521	mrps18c	87	77.528	ENSDARG00000069624	mrps18c	65	77.528	Danio_rerio
ENSACLG00000010521	mrps18c	93	73.684	ENSELUG00000024603	mrps18c	68	75.824	Esox_lucius
ENSACLG00000010521	mrps18c	89	82.418	ENSFHEG00000015550	mrps18c	67	82.418	Fundulus_heteroclitus
ENSACLG00000010521	mrps18c	89	82.418	ENSFHEG00000018752	-	71	82.418	Fundulus_heteroclitus
ENSACLG00000010521	mrps18c	87	65.169	ENSGALG00000023191	MRPS18C	62	65.169	Gallus_gallus
ENSACLG00000010521	mrps18c	91	80.645	ENSGAFG00000008048	mrps18c	60	80.645	Gambusia_affinis
ENSACLG00000010521	mrps18c	87	68.539	ENSGAGG00000015144	-	63	68.539	Gopherus_agassizii
ENSACLG00000010521	mrps18c	91	100.000	ENSHBUG00000002008	mrps18c	72	100.000	Haplochromis_burtoni
ENSACLG00000010521	mrps18c	90	82.609	ENSHCOG00000013161	mrps18c	70	82.609	Hippocampus_comes
ENSACLG00000010521	mrps18c	89	75.824	ENSIPUG00000003783	mrps18c	91	74.468	Ictalurus_punctatus
ENSACLG00000010521	mrps18c	90	86.957	ENSKMAG00000016467	mrps18c	72	86.957	Kryptolebias_marmoratus
ENSACLG00000010521	mrps18c	90	86.957	ENSLBEG00000021861	mrps18c	71	86.957	Labrus_bergylta
ENSACLG00000010521	mrps18c	90	86.957	ENSLBEG00000019174	mrps18c	71	86.957	Labrus_bergylta
ENSACLG00000010521	mrps18c	86	69.318	ENSLACG00000011243	mrps18c	69	69.318	Latimeria_chalumnae
ENSACLG00000010521	mrps18c	89	71.429	ENSLOCG00000012115	mrps18c	67	71.429	Lepisosteus_oculatus
ENSACLG00000010521	mrps18c	90	83.696	ENSMAMG00000012386	mrps18c	69	83.696	Mastacembelus_armatus
ENSACLG00000010521	mrps18c	91	100.000	ENSMZEG00005023278	mrps18c	72	100.000	Maylandia_zebra
ENSACLG00000010521	mrps18c	91	89.247	ENSMMOG00000011316	mrps18c	81	83.019	Mola_mola
ENSACLG00000010521	mrps18c	91	100.000	ENSNBRG00000006182	mrps18c	72	100.000	Neolamprologus_brichardi
ENSACLG00000010521	mrps18c	87	70.787	ENSMEUG00000010972	-	70	70.787	Notamacropus_eugenii
ENSACLG00000010521	mrps18c	91	97.849	ENSONIG00000012527	mrps18c	93	96.809	Oreochromis_niloticus
ENSACLG00000010521	mrps18c	90	81.522	ENSORLG00015006869	mrps18c	71	81.522	Oryzias_latipes_hsok
ENSACLG00000010521	mrps18c	93	74.490	ENSOMEG00000005009	mrps18c	94	74.490	Oryzias_melastigma
ENSACLG00000010521	mrps18c	89	78.022	ENSPKIG00000021736	mrps18c	83	64.754	Paramormyrops_kingsleyae
ENSACLG00000010521	mrps18c	89	86.813	ENSPMGG00000002991	mrps18c	93	85.870	Periophthalmus_magnuspinnatus
ENSACLG00000010521	mrps18c	91	78.495	ENSPFOG00000002351	mrps18c	60	78.495	Poecilia_formosa
ENSACLG00000010521	mrps18c	91	78.495	ENSPLAG00000015187	mrps18c	73	78.495	Poecilia_latipinna
ENSACLG00000010521	mrps18c	91	78.495	ENSPMEG00000014488	mrps18c	60	78.495	Poecilia_mexicana
ENSACLG00000010521	mrps18c	81	83.133	ENSPREG00000012593	mrps18c	85	83.133	Poecilia_reticulata
ENSACLG00000010521	mrps18c	91	98.925	ENSPNYG00000010654	mrps18c	72	98.925	Pundamilia_nyererei
ENSACLG00000010521	mrps18c	96	72.449	ENSPNAG00000009350	mrps18c	85	75.824	Pygocentrus_nattereri
ENSACLG00000010521	mrps18c	89	78.022	ENSSFOG00015019444	mrps18c	67	78.022	Scleropages_formosus
ENSACLG00000010521	mrps18c	90	86.957	ENSSDUG00000015676	mrps18c	72	86.957	Seriola_dumerili
ENSACLG00000010521	mrps18c	90	86.957	ENSSLDG00000002034	mrps18c	71	86.957	Seriola_lalandi_dorsalis
ENSACLG00000010521	mrps18c	85	68.966	ENSSPUG00000013990	-	64	68.966	Sphenodon_punctatus
ENSACLG00000010521	mrps18c	90	80.435	ENSSPAG00000008687	mrps18c	71	81.319	Stegastes_partitus
ENSACLG00000010521	mrps18c	90	82.609	ENSTRUG00000024403	mrps18c	71	82.609	Takifugu_rubripes
ENSACLG00000010521	mrps18c	90	84.783	ENSTNIG00000005674	mrps18c	71	84.783	Tetraodon_nigroviridis
ENSACLG00000010521	mrps18c	81	74.699	ENSXETG00000027597	mrps18c	63	74.699	Xenopus_tropicalis
ENSACLG00000010521	mrps18c	98	79.000	ENSXCOG00000016208	mrps18c	98	79.000	Xiphophorus_couchianus
ENSACLG00000010521	mrps18c	91	80.645	ENSXMAG00000012555	mrps18c	60	80.645	Xiphophorus_maculatus