EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000010522 (Gene tree)
Gene ID: 113007006
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 28605 bases
Position: chr15:23429613-23458217
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000015594	XRN_N	PF03159.18	1.8e-101	1	1
ENSACLP00000015618	XRN_N	PF03159.18	1.3e-88	1	1
ENSACLP00000015653	XRN_N	PF03159.18	1.1e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015956	-	2649	-	ENSACLP00000015594	882 (aa)	-	-
ENSACLT00000015979	-	1620	-	ENSACLP00000015618	539 (aa)	-	-
ENSACLT00000016016	-	294	-	ENSACLP00000015653	97 (aa)	-	-

Gene Model

Click here to download ENSACLG00000010522's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000010522's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000010522	xrn2	96	75.833	ENSG00000088930	XRN2	90	73.757	Homo_sapiens
ENSACLG00000010522	xrn2	98	88.555	ENSAPOG00000009818	xrn2	89	88.555	Acanthochromis_polyacanthus
ENSACLG00000010522	xrn2	96	76.667	ENSAMEG00000012581	XRN2	90	73.757	Ailuropoda_melanoleuca
ENSACLG00000010522	xrn2	95	89.655	ENSACIG00000015047	xrn2	95	89.655	Amphilophus_citrinellus
ENSACLG00000010522	xrn2	98	89.249	ENSAOCG00000023632	xrn2	89	89.249	Amphiprion_ocellaris
ENSACLG00000010522	xrn2	98	89.133	ENSAPEG00000014871	xrn2	89	89.133	Amphiprion_percula
ENSACLG00000010522	xrn2	98	87.903	ENSATEG00000001273	xrn2	90	87.903	Anabas_testudineus
ENSACLG00000010522	xrn2	77	97.333	ENSAPLG00000013869	XRN2	90	72.619	Anas_platyrhynchos
ENSACLG00000010522	xrn2	77	98.667	ENSACAG00000005565	XRN2	89	73.757	Anolis_carolinensis
ENSACLG00000010522	xrn2	96	75.833	ENSANAG00000020126	XRN2	90	73.757	Aotus_nancymaae
ENSACLG00000010522	xrn2	98	81.285	ENSAMXG00000018301	xrn2	92	81.285	Astyanax_mexicanus
ENSACLG00000010522	xrn2	96	76.667	ENSBTAG00000011304	XRN2	90	73.210	Bos_taurus
ENSACLG00000010522	xrn2	96	66.667	WBGene00006964	xrn-2	88	53.580	Caenorhabditis_elegans
ENSACLG00000010522	xrn2	96	75.833	ENSCJAG00000005611	XRN2	90	73.526	Callithrix_jacchus
ENSACLG00000010522	xrn2	77	98.667	ENSCAFG00000005185	XRN2	90	73.642	Canis_familiaris
ENSACLG00000010522	xrn2	96	76.667	ENSCAFG00020027479	XRN2	90	73.642	Canis_lupus_dingo
ENSACLG00000010522	xrn2	96	75.833	ENSCHIG00000006921	XRN2	90	72.864	Capra_hircus
ENSACLG00000010522	xrn2	96	76.667	ENSTSYG00000008315	XRN2	90	73.526	Carlito_syrichta
ENSACLG00000010522	xrn2	77	98.667	ENSCAPG00000010773	XRN2	91	60.855	Cavia_aperea
ENSACLG00000010522	xrn2	96	76.667	ENSCPOG00000009407	XRN2	90	74.596	Cavia_porcellus
ENSACLG00000010522	xrn2	96	75.833	ENSCATG00000040350	XRN2	91	73.642	Cercocebus_atys
ENSACLG00000010522	xrn2	96	76.667	ENSCLAG00000013419	XRN2	90	73.988	Chinchilla_lanigera
ENSACLG00000010522	xrn2	96	75.833	ENSCSAG00000011094	XRN2	90	73.642	Chlorocebus_sabaeus
ENSACLG00000010522	xrn2	79	96.104	ENSCHOG00000013404	XRN2	63	88.172	Choloepus_hoffmanni
ENSACLG00000010522	xrn2	77	98.667	ENSCPBG00000023533	XRN2	90	74.023	Chrysemys_picta_bellii
ENSACLG00000010522	xrn2	96	68.333	ENSCING00000022336	-	100	59.408	Ciona_intestinalis
ENSACLG00000010522	xrn2	96	68.067	ENSCSAVG00000011217	-	93	67.470	Ciona_savignyi
ENSACLG00000010522	xrn2	96	75.833	ENSCANG00000040240	XRN2	90	73.642	Colobus_angolensis_palliatus
ENSACLG00000010522	xrn2	96	76.667	ENSCGRG00001010676	Xrn2	92	74.480	Cricetulus_griseus_chok1gshd
ENSACLG00000010522	xrn2	77	98.667	ENSCGRG00000006378	Xrn2	89	73.365	Cricetulus_griseus_crigri
ENSACLG00000010522	xrn2	96	77.500	ENSCSEG00000005628	xrn2	100	76.641	Cynoglossus_semilaevis
ENSACLG00000010522	xrn2	94	88.654	ENSCVAG00000018999	xrn2	98	88.337	Cyprinodon_variegatus
ENSACLG00000010522	xrn2	97	83.677	ENSDARG00000101900	xrn2	98	83.677	Danio_rerio
ENSACLG00000010522	xrn2	96	76.667	ENSDNOG00000001895	XRN2	90	73.526	Dasypus_novemcinctus
ENSACLG00000010522	xrn2	96	76.667	ENSDORG00000005434	Xrn2	90	72.139	Dipodomys_ordii
ENSACLG00000010522	xrn2	96	71.901	FBgn0031868	Rat1	92	52.511	Drosophila_melanogaster
ENSACLG00000010522	xrn2	96	75.833	ENSETEG00000001740	XRN2	82	77.129	Echinops_telfairi
ENSACLG00000010522	xrn2	77	96.000	ENSEBUG00000016136	xrn2	100	67.883	Eptatretus_burgeri
ENSACLG00000010522	xrn2	96	76.667	ENSEASG00005002484	XRN2	90	74.246	Equus_asinus_asinus
ENSACLG00000010522	xrn2	91	92.308	ENSECAG00000018988	XRN2	86	92.308	Equus_caballus
ENSACLG00000010522	xrn2	73	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSACLG00000010522	xrn2	98	81.725	ENSELUG00000000552	xrn2	90	81.725	Esox_lucius
ENSACLG00000010522	xrn2	96	76.667	ENSFCAG00000007970	XRN2	90	73.526	Felis_catus
ENSACLG00000010522	xrn2	96	75.833	ENSFALG00000004508	XRN2	90	73.148	Ficedula_albicollis
ENSACLG00000010522	xrn2	96	76.667	ENSFDAG00000016311	XRN2	90	73.642	Fukomys_damarensis
ENSACLG00000010522	xrn2	99	89.899	ENSFHEG00000013039	xrn2	98	89.899	Fundulus_heteroclitus
ENSACLG00000010522	xrn2	95	76.967	ENSGMOG00000013436	xrn2	100	78.313	Gadus_morhua
ENSACLG00000010522	xrn2	96	75.833	ENSGALG00000008372	XRN2	90	72.569	Gallus_gallus
ENSACLG00000010522	xrn2	98	85.780	ENSGAFG00000014284	xrn2	99	85.780	Gambusia_affinis
ENSACLG00000010522	xrn2	94	84.913	ENSGACG00000011870	xrn2	100	81.026	Gasterosteus_aculeatus
ENSACLG00000010522	xrn2	96	76.667	ENSGAGG00000004884	XRN2	90	73.908	Gopherus_agassizii
ENSACLG00000010522	xrn2	96	75.833	ENSGGOG00000013738	XRN2	90	73.642	Gorilla_gorilla
ENSACLG00000010522	xrn2	100	100.000	ENSHBUG00000005077	xrn2	100	100.000	Haplochromis_burtoni
ENSACLG00000010522	xrn2	96	76.667	ENSHGLG00000014831	XRN2	90	73.095	Heterocephalus_glaber_female
ENSACLG00000010522	xrn2	96	76.667	ENSHGLG00100013130	XRN2	90	73.095	Heterocephalus_glaber_male
ENSACLG00000010522	xrn2	98	84.083	ENSHCOG00000011994	xrn2	96	80.432	Hippocampus_comes
ENSACLG00000010522	xrn2	94	83.939	ENSIPUG00000006639	xrn2	90	80.641	Ictalurus_punctatus
ENSACLG00000010522	xrn2	96	76.667	ENSSTOG00000000589	XRN2	90	73.642	Ictidomys_tridecemlineatus
ENSACLG00000010522	xrn2	96	76.667	ENSJJAG00000022128	Xrn2	90	74.451	Jaculus_jaculus
ENSACLG00000010522	xrn2	81	81.250	ENSKMAG00000002078	-	96	87.736	Kryptolebias_marmoratus
ENSACLG00000010522	xrn2	100	91.919	ENSLBEG00000010041	xrn2	99	91.919	Labrus_bergylta
ENSACLG00000010522	xrn2	77	98.667	ENSLACG00000008307	XRN2	97	75.402	Latimeria_chalumnae
ENSACLG00000010522	xrn2	95	79.463	ENSLOCG00000016874	xrn2	93	78.715	Lepisosteus_oculatus
ENSACLG00000010522	xrn2	96	76.667	ENSLAFG00000014624	XRN2	90	73.788	Loxodonta_africana
ENSACLG00000010522	xrn2	96	75.833	ENSMFAG00000038122	XRN2	90	73.642	Macaca_fascicularis
ENSACLG00000010522	xrn2	96	75.833	ENSMMUG00000011405	XRN2	90	73.642	Macaca_mulatta
ENSACLG00000010522	xrn2	96	75.833	ENSMNEG00000040626	XRN2	90	73.526	Macaca_nemestrina
ENSACLG00000010522	xrn2	96	75.833	ENSMLEG00000041897	XRN2	90	73.526	Mandrillus_leucophaeus
ENSACLG00000010522	xrn2	98	88.249	ENSMAMG00000008633	xrn2	90	88.249	Mastacembelus_armatus
ENSACLG00000010522	xrn2	100	99.258	ENSMZEG00005022362	xrn2	100	99.258	Maylandia_zebra
ENSACLG00000010522	xrn2	96	75.207	ENSMGAG00000003196	XRN2	90	72.120	Meleagris_gallopavo
ENSACLG00000010522	xrn2	96	76.667	ENSMAUG00000021842	Xrn2	90	74.365	Mesocricetus_auratus
ENSACLG00000010522	xrn2	96	76.667	ENSMICG00000008126	XRN2	90	73.757	Microcebus_murinus
ENSACLG00000010522	xrn2	96	76.667	ENSMOCG00000012588	Xrn2	90	73.642	Microtus_ochrogaster
ENSACLG00000010522	xrn2	98	85.374	ENSMMOG00000017576	xrn2	98	85.264	Mola_mola
ENSACLG00000010522	xrn2	96	76.667	ENSMODG00000006163	XRN2	91	72.945	Monodelphis_domestica
ENSACLG00000010522	xrn2	99	85.118	ENSMALG00000011355	xrn2	99	85.118	Monopterus_albus
ENSACLG00000010522	xrn2	96	76.667	MGP_CAROLIEiJ_G0024400	Xrn2	90	73.873	Mus_caroli
ENSACLG00000010522	xrn2	96	76.667	ENSMUSG00000027433	Xrn2	90	74.018	Mus_musculus
ENSACLG00000010522	xrn2	96	76.667	MGP_PahariEiJ_G0025843	Xrn2	90	73.903	Mus_pahari
ENSACLG00000010522	xrn2	96	76.667	MGP_SPRETEiJ_G0025318	Xrn2	94	88.119	Mus_spretus
ENSACLG00000010522	xrn2	96	76.667	ENSMPUG00000001198	XRN2	84	72.222	Mustela_putorius_furo
ENSACLG00000010522	xrn2	96	76.667	ENSMLUG00000001536	XRN2	90	73.843	Myotis_lucifugus
ENSACLG00000010522	xrn2	96	76.667	ENSNGAG00000018138	Xrn2	90	74.596	Nannospalax_galili
ENSACLG00000010522	xrn2	100	100.000	ENSNBRG00000008062	xrn2	100	100.000	Neolamprologus_brichardi
ENSACLG00000010522	xrn2	96	75.833	ENSNLEG00000009991	XRN2	90	73.757	Nomascus_leucogenys
ENSACLG00000010522	xrn2	77	76.000	ENSMEUG00000008622	-	53	93.333	Notamacropus_eugenii
ENSACLG00000010522	xrn2	62	98.333	ENSOPRG00000001397	-	63	72.105	Ochotona_princeps
ENSACLG00000010522	xrn2	96	75.833	ENSODEG00000010745	-	90	73.642	Octodon_degus
ENSACLG00000010522	xrn2	95	68.009	ENSODEG00000000860	-	91	67.654	Octodon_degus
ENSACLG00000010522	xrn2	98	95.607	ENSONIG00000018720	xrn2	91	92.264	Oreochromis_niloticus
ENSACLG00000010522	xrn2	96	75.833	ENSOANG00000015673	XRN2	90	73.642	Ornithorhynchus_anatinus
ENSACLG00000010522	xrn2	96	76.667	ENSOCUG00000013468	XRN2	90	74.104	Oryctolagus_cuniculus
ENSACLG00000010522	xrn2	98	86.290	ENSORLG00000017213	xrn2	98	85.829	Oryzias_latipes
ENSACLG00000010522	xrn2	98	86.290	ENSORLG00020001824	xrn2	90	86.290	Oryzias_latipes_hni
ENSACLG00000010522	xrn2	98	85.829	ENSORLG00015019747	xrn2	90	85.829	Oryzias_latipes_hsok
ENSACLG00000010522	xrn2	98	85.714	ENSOMEG00000019820	xrn2	89	85.714	Oryzias_melastigma
ENSACLG00000010522	xrn2	96	76.667	ENSOGAG00000001068	XRN2	90	73.873	Otolemur_garnettii
ENSACLG00000010522	xrn2	77	97.333	ENSOARG00000004443	XRN2	90	72.262	Ovis_aries
ENSACLG00000010522	xrn2	96	75.833	ENSPPAG00000033549	XRN2	90	73.642	Pan_paniscus
ENSACLG00000010522	xrn2	96	76.667	ENSPPRG00000008732	XRN2	90	73.526	Panthera_pardus
ENSACLG00000010522	xrn2	77	98.667	ENSPTIG00000015683	XRN2	87	72.944	Panthera_tigris_altaica
ENSACLG00000010522	xrn2	96	75.833	ENSPTRG00000013308	XRN2	90	73.642	Pan_troglodytes
ENSACLG00000010522	xrn2	96	75.833	ENSPANG00000018088	XRN2	90	73.642	Papio_anubis
ENSACLG00000010522	xrn2	97	79.745	ENSPKIG00000016889	xrn2	89	79.745	Paramormyrops_kingsleyae
ENSACLG00000010522	xrn2	68	98.485	ENSPSIG00000014666	XRN2	100	74.550	Pelodiscus_sinensis
ENSACLG00000010522	xrn2	96	76.667	ENSPEMG00000000111	Xrn2	90	74.018	Peromyscus_maniculatus_bairdii
ENSACLG00000010522	xrn2	59	67.847	ENSPMAG00000002576	xrn2	99	68.437	Petromyzon_marinus
ENSACLG00000010522	xrn2	98	85.270	ENSPFOG00000004182	xrn2	90	85.270	Poecilia_formosa
ENSACLG00000010522	xrn2	98	85.436	ENSPLAG00000007351	xrn2	98	85.436	Poecilia_latipinna
ENSACLG00000010522	xrn2	91	84.540	ENSPMEG00000011798	xrn2	89	84.540	Poecilia_mexicana
ENSACLG00000010522	xrn2	98	85.253	ENSPREG00000012452	xrn2	97	85.253	Poecilia_reticulata
ENSACLG00000010522	xrn2	96	75.833	ENSPPYG00000010755	XRN2	90	73.410	Pongo_abelii
ENSACLG00000010522	xrn2	96	76.667	ENSPCAG00000011191	XRN2	90	69.470	Procavia_capensis
ENSACLG00000010522	xrn2	96	75.833	ENSPCOG00000016468	XRN2	89	67.052	Propithecus_coquereli
ENSACLG00000010522	xrn2	96	76.667	ENSPVAG00000004596	XRN2	83	63.675	Pteropus_vampyrus
ENSACLG00000010522	xrn2	100	99.887	ENSPNYG00000001765	xrn2	100	99.887	Pundamilia_nyererei
ENSACLG00000010522	xrn2	98	79.438	ENSPNAG00000010956	xrn2	91	79.438	Pygocentrus_nattereri
ENSACLG00000010522	xrn2	96	76.667	ENSRNOG00000011785	Xrn2	90	74.596	Rattus_norvegicus
ENSACLG00000010522	xrn2	96	75.833	ENSRBIG00000036193	XRN2	100	75.362	Rhinopithecus_bieti
ENSACLG00000010522	xrn2	96	75.833	ENSRROG00000044400	XRN2	81	73.642	Rhinopithecus_roxellana
ENSACLG00000010522	xrn2	96	58.824	YOR048C	RAT1	59	52.657	Saccharomyces_cerevisiae
ENSACLG00000010522	xrn2	96	75.833	ENSSBOG00000021014	XRN2	90	73.757	Saimiri_boliviensis_boliviensis
ENSACLG00000010522	xrn2	97	81.787	ENSSFOG00015001091	xrn2	90	81.787	Scleropages_formosus
ENSACLG00000010522	xrn2	98	86.836	ENSSMAG00000007834	xrn2	88	86.836	Scophthalmus_maximus
ENSACLG00000010522	xrn2	94	90.385	ENSSDUG00000012802	xrn2	100	85.601	Seriola_dumerili
ENSACLG00000010522	xrn2	98	88.364	ENSSLDG00000021273	xrn2	98	88.364	Seriola_lalandi_dorsalis
ENSACLG00000010522	xrn2	68	96.000	ENSSARG00000005859	-	62	96.000	Sorex_araneus
ENSACLG00000010522	xrn2	96	75.000	ENSSPUG00000005485	XRN2	89	71.724	Sphenodon_punctatus
ENSACLG00000010522	xrn2	98	89.133	ENSSPAG00000016027	xrn2	89	89.133	Stegastes_partitus
ENSACLG00000010522	xrn2	96	76.667	ENSSSCG00000007109	XRN2	90	72.254	Sus_scrofa
ENSACLG00000010522	xrn2	97	71.889	ENSTGUG00000007535	XRN2	90	71.889	Taeniopygia_guttata
ENSACLG00000010522	xrn2	98	85.270	ENSTRUG00000015489	xrn2	88	85.270	Takifugu_rubripes
ENSACLG00000010522	xrn2	98	84.041	ENSTNIG00000010712	xrn2	90	84.041	Tetraodon_nigroviridis
ENSACLG00000010522	xrn2	96	76.667	ENSTBEG00000004119	XRN2	90	73.757	Tupaia_belangeri
ENSACLG00000010522	xrn2	96	76.667	ENSTTRG00000009087	XRN2	83	75.398	Tursiops_truncatus
ENSACLG00000010522	xrn2	96	76.667	ENSUAMG00000024634	XRN2	93	72.370	Ursus_americanus
ENSACLG00000010522	xrn2	77	98.667	ENSUMAG00000004012	XRN2	85	73.063	Ursus_maritimus
ENSACLG00000010522	xrn2	85	67.678	ENSVPAG00000010694	XRN2	81	67.678	Vicugna_pacos
ENSACLG00000010522	xrn2	96	76.667	ENSVVUG00000012178	XRN2	90	73.642	Vulpes_vulpes
ENSACLG00000010522	xrn2	96	76.667	ENSXETG00000023501	xrn2	90	75.995	Xenopus_tropicalis
ENSACLG00000010522	xrn2	98	85.616	ENSXMAG00000000242	xrn2	92	84.915	Xiphophorus_maculatus