EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000010642 (Gene tree)
Gene ID: 113016909
Gene Symbol: rbm4.3
Alias: fb55c03|fb78a04|fj36h04|wu:fb55c03|wu:fb78a04|wu:fj36h04|zgc:56141|zgc:77000
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 7152 bases
Position: chr3:3837162-3844313
Accession: 113016909
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000015613	RRM_5	PF13893.6	2.8e-11	1	2
ENSACLP00000015613	RRM_5	PF13893.6	2.8e-11	2	2
ENSACLP00000015625	RRM_5	PF13893.6	3.2e-11	1	2
ENSACLP00000015625	RRM_5	PF13893.6	3.2e-11	2	2
ENSACLP00000015628	RRM_5	PF13893.6	3.2e-11	1	2
ENSACLP00000015628	RRM_5	PF13893.6	3.2e-11	2	2
ENSACLP00000015625	RRM_1	PF00076.22	3.9e-26	1	2
ENSACLP00000015625	RRM_1	PF00076.22	3.9e-26	2	2
ENSACLP00000015628	RRM_1	PF00076.22	3.9e-26	1	2
ENSACLP00000015628	RRM_1	PF00076.22	3.9e-26	2	2
ENSACLP00000015613	RRM_1	PF00076.22	4.5e-26	1	2
ENSACLP00000015613	RRM_1	PF00076.22	4.5e-26	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000015992	-	2068	-	ENSACLP00000015628	344 (aa)	XP_026015879	UPI0003298841
ENSACLT00000015988	-	1617	-	ENSACLP00000015625	344 (aa)	XP_026015879	UPI0003298841
ENSACLT00000015975	-	1549	-	ENSACLP00000015613	360 (aa)	-	-

Gene Model

Click here to download ENSACLG00000010642's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000010642's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000010642	rbm4.3	96	37.789	ENSACLG00000007740	-	99	49.669
ENSACLG00000010642	rbm4.3	99	66.952	ENSACLG00000010620	-	99	67.521
ENSACLG00000010642	rbm4.3	86	54.248	ENSACLG00000007722	rbm4.1	67	54.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000010642	rbm4.3	99	70.370	ENSAPOG00000002953	rbm4.3	99	70.940	Acanthochromis_polyacanthus
ENSACLG00000010642	rbm4.3	100	84.348	ENSAPOG00000002991	rbm4.3	100	84.348	Acanthochromis_polyacanthus
ENSACLG00000010642	rbm4.3	99	66.097	ENSACIG00000021311	-	99	66.952	Amphilophus_citrinellus
ENSACLG00000010642	rbm4.3	100	91.014	ENSACIG00000021295	rbm4.3	100	91.014	Amphilophus_citrinellus
ENSACLG00000010642	rbm4.3	99	70.571	ENSAOCG00000008015	rbm4.3	99	70.857	Amphiprion_ocellaris
ENSACLG00000010642	rbm4.3	100	84.638	ENSAOCG00000007992	rbm4.3	96	85.152	Amphiprion_ocellaris
ENSACLG00000010642	rbm4.3	100	84.928	ENSAPEG00000017288	rbm4.3	96	85.152	Amphiprion_percula
ENSACLG00000010642	rbm4.3	99	70.774	ENSAPEG00000017324	rbm4.3	99	70.774	Amphiprion_percula
ENSACLG00000010642	rbm4.3	100	80.980	ENSATEG00000019395	rbm4.3	100	81.556	Anabas_testudineus
ENSACLG00000010642	rbm4.3	99	69.714	ENSATEG00000019375	rbm4.3	99	70.000	Anabas_testudineus
ENSACLG00000010642	rbm4.3	52	74.302	ENSAMXG00000040224	rbm4.3	73	73.184	Astyanax_mexicanus
ENSACLG00000010642	rbm4.3	97	63.478	ENSCSEG00000013659	rbm4.3	97	65.782	Cynoglossus_semilaevis
ENSACLG00000010642	rbm4.3	96	64.706	ENSCVAG00000008508	rbm4.3	97	65.192	Cyprinodon_variegatus
ENSACLG00000010642	rbm4.3	100	77.364	ENSCVAG00000008502	rbm4.3	100	78.510	Cyprinodon_variegatus
ENSACLG00000010642	rbm4.3	94	71.125	ENSDARG00000022129	rbm4.3	97	70.833	Danio_rerio
ENSACLG00000010642	rbm4.3	97	66.857	ENSELUG00000022155	rbm4.3	97	69.208	Esox_lucius
ENSACLG00000010642	rbm4.3	97	67.529	ENSELUG00000022150	rbm4.3	96	67.359	Esox_lucius
ENSACLG00000010642	rbm4.3	97	69.591	ENSELUG00000022168	rbm4.3	97	71.217	Esox_lucius
ENSACLG00000010642	rbm4.3	100	75.562	ENSFHEG00000023096	rbm4.3	100	76.404	Fundulus_heteroclitus
ENSACLG00000010642	rbm4.3	79	69.314	ENSFHEG00000023137	rbm4.3	87	69.675	Fundulus_heteroclitus
ENSACLG00000010642	rbm4.3	63	75.000	ENSGMOG00000004032	rbm4.3	52	76.636	Gadus_morhua
ENSACLG00000010642	rbm4.3	99	76.791	ENSGAFG00000001935	rbm4.3	99	75.358	Gambusia_affinis
ENSACLG00000010642	rbm4.3	99	80.275	ENSGACG00000019980	rbm4.3	100	77.714	Gasterosteus_aculeatus
ENSACLG00000010642	rbm4.3	99	66.952	ENSHBUG00000009020	-	99	67.521	Haplochromis_burtoni
ENSACLG00000010642	rbm4.3	100	99.128	ENSHBUG00000009051	rbm4.3	100	99.128	Haplochromis_burtoni
ENSACLG00000010642	rbm4.3	100	66.761	ENSHCOG00000010363	rbm4.3	94	71.429	Hippocampus_comes
ENSACLG00000010642	rbm4.3	94	65.861	ENSHCOG00000010349	rbm4.3	96	65.282	Hippocampus_comes
ENSACLG00000010642	rbm4.3	96	64.897	ENSIPUG00000022943	RBM4B	97	65.487	Ictalurus_punctatus
ENSACLG00000010642	rbm4.3	100	75.499	ENSKMAG00000014541	rbm4.3	100	76.068	Kryptolebias_marmoratus
ENSACLG00000010642	rbm4.3	97	60.882	ENSKMAG00000017468	rbm4.3	97	62.832	Kryptolebias_marmoratus
ENSACLG00000010642	rbm4.3	55	83.069	ENSLBEG00000001025	rbm4.3	86	82.540	Labrus_bergylta
ENSACLG00000010642	rbm4.3	99	67.521	ENSLBEG00000001071	-	99	68.376	Labrus_bergylta
ENSACLG00000010642	rbm4.3	94	55.525	ENSLOCG00000002755	rbm4.3	97	56.131	Lepisosteus_oculatus
ENSACLG00000010642	rbm4.3	99	69.429	ENSMAMG00000004715	-	84	70.085	Mastacembelus_armatus
ENSACLG00000010642	rbm4.3	100	82.081	ENSMAMG00000004701	rbm4.3	100	82.659	Mastacembelus_armatus
ENSACLG00000010642	rbm4.3	83	62.500	ENSMZEG00005028537	-	83	64.527	Maylandia_zebra
ENSACLG00000010642	rbm4.3	99	63.248	ENSMZEG00005007417	-	99	63.818	Maylandia_zebra
ENSACLG00000010642	rbm4.3	85	100.000	ENSMZEG00005007441	rbm4.3	84	100.000	Maylandia_zebra
ENSACLG00000010642	rbm4.3	100	100.000	ENSMZEG00005028540	rbm4.3	100	100.000	Maylandia_zebra
ENSACLG00000010642	rbm4.3	100	78.797	ENSMMOG00000012191	rbm4.3	100	79.370	Mola_mola
ENSACLG00000010642	rbm4.3	100	79.191	ENSMALG00000015014	-	96	80.000	Monopterus_albus
ENSACLG00000010642	rbm4.3	90	80.000	ENSMALG00000003032	rbm4.3	95	80.645	Monopterus_albus
ENSACLG00000010642	rbm4.3	85	67.550	ENSMALG00000003001	rbm4.3	87	70.847	Monopterus_albus
ENSACLG00000010642	rbm4.3	100	97.674	ENSNBRG00000012372	rbm4.3	100	97.674	Neolamprologus_brichardi
ENSACLG00000010642	rbm4.3	100	95.115	ENSONIG00000018378	rbm4.3	100	95.115	Oreochromis_niloticus
ENSACLG00000010642	rbm4.3	99	66.952	ENSONIG00000018380	-	99	67.521	Oreochromis_niloticus
ENSACLG00000010642	rbm4.3	96	58.721	ENSORLG00000011589	rbm4.3	97	60.000	Oryzias_latipes
ENSACLG00000010642	rbm4.3	96	57.971	ENSORLG00000012473	rbm4.3	97	59.538	Oryzias_latipes
ENSACLG00000010642	rbm4.3	100	70.029	ENSORLG00000024749	rbm4.3	100	70.029	Oryzias_latipes
ENSACLG00000010642	rbm4.3	96	58.430	ENSORLG00020012474	rbm4.3	97	59.710	Oryzias_latipes_hni
ENSACLG00000010642	rbm4.3	96	57.971	ENSORLG00020012464	rbm4.3	97	59.538	Oryzias_latipes_hni
ENSACLG00000010642	rbm4.3	100	68.876	ENSORLG00020012482	rbm4.3	100	69.164	Oryzias_latipes_hni
ENSACLG00000010642	rbm4.3	96	57.681	ENSORLG00015013686	rbm4.3	97	59.249	Oryzias_latipes_hsok
ENSACLG00000010642	rbm4.3	96	57.267	ENSORLG00015013698	rbm4.3	97	60.000	Oryzias_latipes_hsok
ENSACLG00000010642	rbm4.3	100	69.452	ENSORLG00015013721	rbm4.3	100	69.452	Oryzias_latipes_hsok
ENSACLG00000010642	rbm4.3	97	57.955	ENSOMEG00000005918	rbm4.3	97	59.942	Oryzias_melastigma
ENSACLG00000010642	rbm4.3	100	72.832	ENSOMEG00000005950	rbm4.3	100	73.410	Oryzias_melastigma
ENSACLG00000010642	rbm4.3	96	58.261	ENSOMEG00000005929	rbm4.3	97	59.249	Oryzias_melastigma
ENSACLG00000010642	rbm4.3	92	67.674	ENSPKIG00000007001	rbm4.3	97	67.463	Paramormyrops_kingsleyae
ENSACLG00000010642	rbm4.3	97	63.265	ENSPLAG00000006131	rbm4.3	97	64.012	Poecilia_latipinna
ENSACLG00000010642	rbm4.3	100	80.737	ENSPLAG00000006077	rbm4.3	100	80.453	Poecilia_latipinna
ENSACLG00000010642	rbm4.3	100	81.250	ENSPMEG00000024260	rbm4.3	100	80.966	Poecilia_mexicana
ENSACLG00000010642	rbm4.3	99	64.489	ENSPMEG00000024263	rbm4.3	99	64.773	Poecilia_mexicana
ENSACLG00000010642	rbm4.3	97	63.450	ENSPMEG00000024271	rbm4.3	97	64.307	Poecilia_mexicana
ENSACLG00000010642	rbm4.3	97	62.426	ENSPREG00000002156	rbm4.3	97	62.874	Poecilia_reticulata
ENSACLG00000010642	rbm4.3	100	79.830	ENSPREG00000002093	-	100	80.398	Poecilia_reticulata
ENSACLG00000010642	rbm4.3	100	98.841	ENSPNYG00000018564	rbm4.3	100	98.841	Pundamilia_nyererei
ENSACLG00000010642	rbm4.3	99	66.952	ENSPNYG00000018541	rbm4.3	99	67.521	Pundamilia_nyererei
ENSACLG00000010642	rbm4.3	97	66.102	ENSPNAG00000013053	rbm4.3	97	67.529	Pygocentrus_nattereri
ENSACLG00000010642	rbm4.3	97	62.953	ENSSFOG00015015563	rbm4.3	97	62.963	Scleropages_formosus
ENSACLG00000010642	rbm4.3	100	75.862	ENSSMAG00000013653	rbm4.3	100	77.874	Scophthalmus_maximus
ENSACLG00000010642	rbm4.3	99	68.768	ENSSMAG00000013644	rbm4.3	99	69.143	Scophthalmus_maximus
ENSACLG00000010642	rbm4.3	100	82.471	ENSSDUG00000018422	rbm4.3	100	82.471	Seriola_dumerili
ENSACLG00000010642	rbm4.3	99	69.429	ENSSDUG00000018435	rbm4.3	99	69.714	Seriola_dumerili
ENSACLG00000010642	rbm4.3	99	69.429	ENSSLDG00000017204	rbm4.3	99	69.714	Seriola_lalandi_dorsalis
ENSACLG00000010642	rbm4.3	100	81.322	ENSSLDG00000017182	rbm4.3	100	81.322	Seriola_lalandi_dorsalis
ENSACLG00000010642	rbm4.3	99	68.857	ENSSPAG00000008062	rbm4.3	97	71.429	Stegastes_partitus
ENSACLG00000010642	rbm4.3	100	84.682	ENSSPAG00000008041	rbm4.3	82	85.801	Stegastes_partitus
ENSACLG00000010642	rbm4.3	97	67.151	ENSTRUG00000020901	rbm4.3	97	67.751	Takifugu_rubripes
ENSACLG00000010642	rbm4.3	100	77.364	ENSTRUG00000023874	rbm4.3	100	78.223	Takifugu_rubripes
ENSACLG00000010642	rbm4.3	97	63.930	ENSTNIG00000005668	rbm4.3	97	64.881	Tetraodon_nigroviridis
ENSACLG00000010642	rbm4.3	99	63.920	ENSXCOG00000006001	rbm4.3	99	63.920	Xiphophorus_couchianus
ENSACLG00000010642	rbm4.3	96	80.896	ENSXCOG00000005996	rbm4.3	97	81.194	Xiphophorus_couchianus
ENSACLG00000010642	rbm4.3	99	63.636	ENSXMAG00000021997	rbm4.3	99	63.636	Xiphophorus_maculatus
ENSACLG00000010642	rbm4.3	97	64.140	ENSXMAG00000011698	rbm4.3	97	64.897	Xiphophorus_maculatus
ENSACLG00000010642	rbm4.3	96	80.415	ENSXMAG00000025173	rbm4.3	100	80.114	Xiphophorus_maculatus