EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000011144 (Gene tree)
Gene ID: 113021490
Gene Symbol: snrnp70
Alias: U1 small ribonucleoprotein 70kd|snrp70|wu:fc20b04|zgc:136450
Full Name: small nuclear ribonucleoprotein 70 (U1)
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 8216 bases
Position: chr4:32857683-32865898
Accession: ZDB-GENE-040825-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000016354	RRM_1	PF00076.22	1.7e-19	1	1
ENSACLP00000016354	U1snRNP70_N	PF12220.8	8.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000016740	-	1422	-	ENSACLP00000016354	473 (aa)	-	-

Gene Model

Click here to download ENSACLG00000011144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011144's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011144	snrnp70	100	86.316	ENSACIG00000017909	snrnp70	100	88.679	Amphilophus_citrinellus
ENSACLG00000011144	snrnp70	54	47.266	WBGene00004390	rnp-7	56	51.064	Caenorhabditis_elegans
ENSACLG00000011144	snrnp70	100	72.594	ENSFHEG00000010298	snrnp70	100	73.333	Fundulus_heteroclitus
ENSACLG00000011144	snrnp70	100	97.263	ENSHBUG00000018856	snrnp70	100	97.263	Haplochromis_burtoni
ENSACLG00000011144	snrnp70	100	74.792	ENSHCOG00000010270	snrnp70	100	73.904	Hippocampus_comes
ENSACLG00000011144	snrnp70	56	80.451	ENSMNEG00000038057	SNRNP70	52	91.928	Macaca_nemestrina
ENSACLG00000011144	snrnp70	100	77.824	ENSMAMG00000004556	snrnp70	100	80.962	Mastacembelus_armatus
ENSACLG00000011144	snrnp70	100	98.309	ENSMZEG00005022849	snrnp70	100	98.309	Maylandia_zebra
ENSACLG00000011144	snrnp70	53	84.400	ENSMICG00000038437	SNRNP70	99	88.415	Microcebus_murinus
ENSACLG00000011144	snrnp70	74	88.920	ENSMALG00000002275	snrnp70	90	84.267	Monopterus_albus
ENSACLG00000011144	snrnp70	52	84.016	ENSNLEG00000004899	SNRNP70	87	91.705	Nomascus_leucogenys
ENSACLG00000011144	snrnp70	100	74.322	ENSORLG00000017158	snrnp70	100	79.583	Oryzias_latipes
ENSACLG00000011144	snrnp70	100	74.739	ENSORLG00015010817	snrnp70	100	79.792	Oryzias_latipes_hsok
ENSACLG00000011144	snrnp70	100	81.474	ENSOMEG00000013002	snrnp70	100	82.105	Oryzias_melastigma
ENSACLG00000011144	snrnp70	100	77.311	ENSPFOG00000016671	snrnp70	100	81.799	Poecilia_formosa
ENSACLG00000011144	snrnp70	100	77.101	ENSPLAG00000005912	snrnp70	100	81.590	Poecilia_latipinna
ENSACLG00000011144	snrnp70	100	77.311	ENSPMEG00000008496	snrnp70	100	81.799	Poecilia_mexicana
ENSACLG00000011144	snrnp70	100	77.101	ENSPREG00000005486	snrnp70	100	81.590	Poecilia_reticulata
ENSACLG00000011144	snrnp70	100	97.895	ENSPNYG00000003258	snrnp70	100	97.895	Pundamilia_nyererei
ENSACLG00000011144	snrnp70	100	73.849	ENSSMAG00000013978	snrnp70	100	77.033	Scophthalmus_maximus
ENSACLG00000011144	snrnp70	53	86.454	ENSSPUG00000016621	SNRNP70	52	93.243	Sphenodon_punctatus
ENSACLG00000011144	snrnp70	100	71.097	ENSTRUG00000009202	snrnp70	100	72.421	Takifugu_rubripes