EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011188 (Gene tree)
Gene ID: 113033181
Gene Symbol: snrnp200
Alias: fb63a09|si:ch211-251j10.5|wu:fb63a09
Full Name: small nuclear ribonucleoprotein U5 subunit 200
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 13585 bases
Position: chr12:24276568-24290152
Accession: 113033181
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000016556	ResIII	PF04851.15	5.3e-26	1	2
ENSACLP00000016556	ResIII	PF04851.15	5.3e-26	2	2
ENSACLP00000016508	ResIII	PF04851.15	7.1e-26	1	2
ENSACLP00000016508	ResIII	PF04851.15	7.1e-26	2	2
ENSACLP00000016528	ResIII	PF04851.15	7.1e-26	1	2
ENSACLP00000016528	ResIII	PF04851.15	7.1e-26	2	2
ENSACLP00000016556	DEAD	PF00270.29	2.8e-53	1	2
ENSACLP00000016556	DEAD	PF00270.29	2.8e-53	2	2
ENSACLP00000016508	DEAD	PF00270.29	4.4e-53	1	2
ENSACLP00000016508	DEAD	PF00270.29	4.4e-53	2	2
ENSACLP00000016528	DEAD	PF00270.29	4.4e-53	1	2
ENSACLP00000016528	DEAD	PF00270.29	4.4e-53	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000016896	-	6914	XM_026186651	ENSACLP00000016508	2136 (aa)	XP_026042436	UPI000E425F53
ENSACLT00000016944	-	5559	-	ENSACLP00000016556	1852 (aa)	-	-
ENSACLT00000016916	-	6825	XM_026186652	ENSACLP00000016528	2136 (aa)	XP_026042437	UPI000E425F53

Gene Model

Click here to download ENSACLG00000011188's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011188's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011188	snrnp200	80	47.012	ENSACLG00000006736	ascc3	91	45.897
ENSACLG00000011188	snrnp200	72	32.368	ENSACLG00000009033	hfm1	87	31.202

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011188	snrnp200	99	90.403	ENSG00000144028	SNRNP200	99	90.512	Homo_sapiens
ENSACLG00000011188	snrnp200	100	97.800	ENSAPOG00000010223	snrnp200	100	97.800	Acanthochromis_polyacanthus
ENSACLG00000011188	snrnp200	99	90.449	ENSAMEG00000008996	SNRNP200	99	90.559	Ailuropoda_melanoleuca
ENSACLG00000011188	snrnp200	97	98.607	ENSACIG00000001764	snrnp200	98	98.607	Amphilophus_citrinellus
ENSACLG00000011188	snrnp200	100	97.706	ENSAOCG00000024593	snrnp200	100	97.706	Amphiprion_ocellaris
ENSACLG00000011188	snrnp200	97	97.160	ENSAPEG00000012554	snrnp200	100	97.160	Amphiprion_percula
ENSACLG00000011188	snrnp200	100	97.659	ENSATEG00000022522	snrnp200	100	97.659	Anabas_testudineus
ENSACLG00000011188	snrnp200	99	90.712	ENSAPLG00000004313	SNRNP200	99	90.776	Anas_platyrhynchos
ENSACLG00000011188	snrnp200	99	89.814	ENSACAG00000000434	SNRNP200	100	89.814	Anolis_carolinensis
ENSACLG00000011188	snrnp200	99	87.623	ENSANAG00000036625	SNRNP200	99	87.723	Aotus_nancymaae
ENSACLG00000011188	snrnp200	99	94.311	ENSAMXG00000005684	snrnp200	99	94.311	Astyanax_mexicanus
ENSACLG00000011188	snrnp200	99	90.122	ENSBTAG00000000848	SNRNP200	99	90.230	Bos_taurus
ENSACLG00000011188	snrnp200	99	90.356	ENSCJAG00000007514	SNRNP200	99	90.465	Callithrix_jacchus
ENSACLG00000011188	snrnp200	99	89.687	ENSCAFG00020019979	SNRNP200	99	91.623	Canis_lupus_dingo
ENSACLG00000011188	snrnp200	99	90.309	ENSCHIG00000020611	SNRNP200	99	90.418	Capra_hircus
ENSACLG00000011188	snrnp200	99	90.449	ENSTSYG00000010467	SNRNP200	99	90.559	Carlito_syrichta
ENSACLG00000011188	snrnp200	99	89.939	ENSCAPG00000017234	SNRNP200	99	90.047	Cavia_aperea
ENSACLG00000011188	snrnp200	99	90.262	ENSCPOG00000006776	SNRNP200	99	90.371	Cavia_porcellus
ENSACLG00000011188	snrnp200	99	90.356	ENSCCAG00000033962	SNRNP200	99	90.465	Cebus_capucinus
ENSACLG00000011188	snrnp200	99	90.403	ENSCATG00000015790	SNRNP200	99	90.512	Cercocebus_atys
ENSACLG00000011188	snrnp200	99	90.356	ENSCLAG00000004116	SNRNP200	99	90.465	Chinchilla_lanigera
ENSACLG00000011188	snrnp200	99	90.449	ENSCSAG00000017369	SNRNP200	99	90.559	Chlorocebus_sabaeus
ENSACLG00000011188	snrnp200	74	93.701	ENSCHOG00000012981	-	58	93.701	Choloepus_hoffmanni
ENSACLG00000011188	snrnp200	99	90.416	ENSCPBG00000022571	SNRNP200	99	92.500	Chrysemys_picta_bellii
ENSACLG00000011188	snrnp200	99	76.015	ENSCING00000005082	-	99	76.347	Ciona_intestinalis
ENSACLG00000011188	snrnp200	94	90.095	ENSCANG00000033932	SNRNP200	99	90.210	Colobus_angolensis_palliatus
ENSACLG00000011188	snrnp200	99	90.403	ENSCGRG00001022610	Snrnp200	99	90.512	Cricetulus_griseus_chok1gshd
ENSACLG00000011188	snrnp200	99	89.902	ENSCGRG00000016472	Snrnp200	99	90.009	Cricetulus_griseus_crigri
ENSACLG00000011188	snrnp200	99	95.923	ENSCSEG00000016399	snrnp200	99	96.049	Cynoglossus_semilaevis
ENSACLG00000011188	snrnp200	100	91.386	ENSCVAG00000017631	snrnp200	100	91.386	Cyprinodon_variegatus
ENSACLG00000011188	snrnp200	100	94.382	ENSDARG00000077536	snrnp200	99	94.405	Danio_rerio
ENSACLG00000011188	snrnp200	99	89.139	ENSDNOG00000011227	SNRNP200	99	89.244	Dasypus_novemcinctus
ENSACLG00000011188	snrnp200	99	87.944	ENSDORG00000005861	Snrnp200	99	88.045	Dipodomys_ordii
ENSACLG00000011188	snrnp200	100	73.883	FBgn0263599	l(3)72Ab	99	74.204	Drosophila_melanogaster
ENSACLG00000011188	snrnp200	94	94.581	ENSETEG00000000162	SNRNP200	74	89.836	Echinops_telfairi
ENSACLG00000011188	snrnp200	83	80.897	ENSEBUG00000016524	snrnp200	95	80.897	Eptatretus_burgeri
ENSACLG00000011188	snrnp200	99	89.417	ENSEASG00005001884	SNRNP200	99	89.429	Equus_asinus_asinus
ENSACLG00000011188	snrnp200	99	90.449	ENSECAG00000019675	SNRNP200	99	90.559	Equus_caballus
ENSACLG00000011188	snrnp200	88	100.000	ENSEEUG00000012178	SNRNP200	93	100.000	Erinaceus_europaeus
ENSACLG00000011188	snrnp200	99	95.677	ENSELUG00000018948	snrnp200	99	95.677	Esox_lucius
ENSACLG00000011188	snrnp200	99	90.496	ENSFCAG00000010699	SNRNP200	99	90.606	Felis_catus
ENSACLG00000011188	snrnp200	93	86.607	ENSFALG00000001368	-	94	86.607	Ficedula_albicollis
ENSACLG00000011188	snrnp200	99	90.262	ENSFDAG00000004683	SNRNP200	99	90.371	Fukomys_damarensis
ENSACLG00000011188	snrnp200	100	94.007	ENSFHEG00000003786	snrnp200	100	94.007	Fundulus_heteroclitus
ENSACLG00000011188	snrnp200	100	94.626	ENSGMOG00000004881	snrnp200	99	94.510	Gadus_morhua
ENSACLG00000011188	snrnp200	100	94.101	ENSGAFG00000010807	snrnp200	100	94.101	Gambusia_affinis
ENSACLG00000011188	snrnp200	100	96.824	ENSGACG00000011474	snrnp200	99	96.824	Gasterosteus_aculeatus
ENSACLG00000011188	snrnp200	95	92.570	ENSGAGG00000016069	SNRNP200	97	98.387	Gopherus_agassizii
ENSACLG00000011188	snrnp200	99	90.403	ENSGGOG00000005174	SNRNP200	99	90.512	Gorilla_gorilla
ENSACLG00000011188	snrnp200	100	99.946	ENSHBUG00000011322	snrnp200	100	99.946	Haplochromis_burtoni
ENSACLG00000011188	snrnp200	99	90.309	ENSHGLG00000006654	SNRNP200	99	90.418	Heterocephalus_glaber_female
ENSACLG00000011188	snrnp200	99	90.309	ENSHGLG00100018594	SNRNP200	99	90.418	Heterocephalus_glaber_male
ENSACLG00000011188	snrnp200	99	90.403	ENSSTOG00000016351	SNRNP200	99	90.512	Ictidomys_tridecemlineatus
ENSACLG00000011188	snrnp200	99	90.262	ENSJJAG00000023659	Snrnp200	99	90.371	Jaculus_jaculus
ENSACLG00000011188	snrnp200	100	94.260	ENSKMAG00000003665	snrnp200	100	94.260	Kryptolebias_marmoratus
ENSACLG00000011188	snrnp200	100	97.331	ENSLBEG00000021585	snrnp200	100	97.331	Labrus_bergylta
ENSACLG00000011188	snrnp200	82	92.206	ENSLACG00000000226	SNRNP200	99	92.339	Latimeria_chalumnae
ENSACLG00000011188	snrnp200	100	93.966	ENSLOCG00000015198	snrnp200	99	93.988	Lepisosteus_oculatus
ENSACLG00000011188	snrnp200	99	90.262	ENSLAFG00000015626	SNRNP200	99	90.371	Loxodonta_africana
ENSACLG00000011188	snrnp200	99	90.356	ENSMFAG00000040174	SNRNP200	99	91.570	Macaca_fascicularis
ENSACLG00000011188	snrnp200	99	90.356	ENSMMUG00000023261	SNRNP200	99	90.465	Macaca_mulatta
ENSACLG00000011188	snrnp200	99	90.309	ENSMNEG00000032398	SNRNP200	99	90.418	Macaca_nemestrina
ENSACLG00000011188	snrnp200	99	90.403	ENSMLEG00000019083	SNRNP200	99	91.570	Mandrillus_leucophaeus
ENSACLG00000011188	snrnp200	100	97.099	ENSMAMG00000007851	snrnp200	100	97.099	Mastacembelus_armatus
ENSACLG00000011188	snrnp200	100	99.946	ENSMZEG00005010787	snrnp200	100	99.946	Maylandia_zebra
ENSACLG00000011188	snrnp200	97	90.324	ENSMGAG00000001831	SNRNP200	99	90.444	Meleagris_gallopavo
ENSACLG00000011188	snrnp200	99	90.449	ENSMAUG00000011825	Snrnp200	99	90.559	Mesocricetus_auratus
ENSACLG00000011188	snrnp200	99	90.449	ENSMICG00000004710	SNRNP200	99	90.559	Microcebus_murinus
ENSACLG00000011188	snrnp200	99	88.670	ENSMOCG00000011814	Snrnp200	99	88.774	Microtus_ochrogaster
ENSACLG00000011188	snrnp200	99	95.299	ENSMMOG00000014167	snrnp200	99	95.299	Mola_mola
ENSACLG00000011188	snrnp200	99	90.403	ENSMODG00000008475	SNRNP200	99	90.465	Monodelphis_domestica
ENSACLG00000011188	snrnp200	100	97.425	ENSMALG00000001973	snrnp200	100	97.425	Monopterus_albus
ENSACLG00000011188	snrnp200	99	90.309	MGP_CAROLIEiJ_G0024250	Snrnp200	99	90.418	Mus_caroli
ENSACLG00000011188	snrnp200	99	90.356	ENSMUSG00000003660	Snrnp200	99	90.465	Mus_musculus
ENSACLG00000011188	snrnp200	99	90.356	MGP_PahariEiJ_G0025695	Snrnp200	99	90.465	Mus_pahari
ENSACLG00000011188	snrnp200	99	90.356	MGP_SPRETEiJ_G0025170	Snrnp200	99	92.394	Mus_spretus
ENSACLG00000011188	snrnp200	99	90.496	ENSMPUG00000008949	SNRNP200	99	90.606	Mustela_putorius_furo
ENSACLG00000011188	snrnp200	99	87.079	ENSMLUG00000027511	-	99	87.177	Myotis_lucifugus
ENSACLG00000011188	snrnp200	99	89.995	ENSMLUG00000010493	SNRNP200	99	90.103	Myotis_lucifugus
ENSACLG00000011188	snrnp200	99	90.403	ENSNGAG00000021993	Snrnp200	99	90.512	Nannospalax_galili
ENSACLG00000011188	snrnp200	90	99.768	ENSNBRG00000017960	snrnp200	98	99.768	Neolamprologus_brichardi
ENSACLG00000011188	snrnp200	99	86.053	ENSNLEG00000000025	SNRNP200	99	86.241	Nomascus_leucogenys
ENSACLG00000011188	snrnp200	99	93.814	ENSMEUG00000010532	SNRNP200	78	92.857	Notamacropus_eugenii
ENSACLG00000011188	snrnp200	96	89.251	ENSOPRG00000015464	SNRNP200	96	89.371	Ochotona_princeps
ENSACLG00000011188	snrnp200	99	90.309	ENSODEG00000008366	SNRNP200	99	90.418	Octodon_degus
ENSACLG00000011188	snrnp200	100	99.579	ENSONIG00000010714	snrnp200	100	99.579	Oreochromis_niloticus
ENSACLG00000011188	snrnp200	99	90.356	ENSOCUG00000009864	SNRNP200	99	90.465	Oryctolagus_cuniculus
ENSACLG00000011188	snrnp200	99	95.876	ENSORLG00000012286	snrnp200	99	95.939	Oryzias_latipes
ENSACLG00000011188	snrnp200	99	96.017	ENSORLG00020004648	snrnp200	99	96.051	Oryzias_latipes_hni
ENSACLG00000011188	snrnp200	99	96.064	ENSORLG00015019114	snrnp200	99	96.098	Oryzias_latipes_hsok
ENSACLG00000011188	snrnp200	100	96.255	ENSOMEG00000011834	snrnp200	100	96.255	Oryzias_melastigma
ENSACLG00000011188	snrnp200	99	90.449	ENSOGAG00000006879	SNRNP200	99	90.559	Otolemur_garnettii
ENSACLG00000011188	snrnp200	99	89.565	ENSOARG00000013949	SNRNP200	99	89.671	Ovis_aries
ENSACLG00000011188	snrnp200	99	90.403	ENSPPAG00000041559	SNRNP200	99	90.512	Pan_paniscus
ENSACLG00000011188	snrnp200	99	90.496	ENSPPRG00000004435	SNRNP200	99	90.606	Panthera_pardus
ENSACLG00000011188	snrnp200	99	90.075	ENSPTIG00000006380	SNRNP200	99	90.183	Panthera_tigris_altaica
ENSACLG00000011188	snrnp200	99	90.403	ENSPTRG00000012230	SNRNP200	99	90.512	Pan_troglodytes
ENSACLG00000011188	snrnp200	99	90.403	ENSPANG00000006017	SNRNP200	99	90.512	Papio_anubis
ENSACLG00000011188	snrnp200	100	95.087	ENSPKIG00000014762	snrnp200	99	95.159	Paramormyrops_kingsleyae
ENSACLG00000011188	snrnp200	99	89.612	ENSPSIG00000008580	SNRNP200	99	89.671	Pelodiscus_sinensis
ENSACLG00000011188	snrnp200	99	90.356	ENSPCIG00000023050	SNRNP200	99	90.418	Phascolarctos_cinereus
ENSACLG00000011188	snrnp200	100	96.537	ENSPFOG00000015110	snrnp200	100	96.537	Poecilia_formosa
ENSACLG00000011188	snrnp200	97	96.920	ENSPLAG00000006711	snrnp200	99	96.920	Poecilia_latipinna
ENSACLG00000011188	snrnp200	97	96.865	ENSPMEG00000021166	snrnp200	99	96.865	Poecilia_mexicana
ENSACLG00000011188	snrnp200	100	96.536	ENSPREG00000008875	snrnp200	100	96.536	Poecilia_reticulata
ENSACLG00000011188	snrnp200	99	90.403	ENSPPYG00000012068	SNRNP200	99	90.512	Pongo_abelii
ENSACLG00000011188	snrnp200	97	94.872	ENSPCAG00000008536	SNRNP200	85	97.872	Procavia_capensis
ENSACLG00000011188	snrnp200	99	90.403	ENSPCOG00000024608	SNRNP200	99	90.512	Propithecus_coquereli
ENSACLG00000011188	snrnp200	96	90.583	ENSPVAG00000005860	SNRNP200	92	90.825	Pteropus_vampyrus
ENSACLG00000011188	snrnp200	99	96.965	ENSPNYG00000017476	snrnp200	100	95.005	Pundamilia_nyererei
ENSACLG00000011188	snrnp200	100	90.407	ENSPNAG00000010998	snrnp200	99	90.461	Pygocentrus_nattereri
ENSACLG00000011188	snrnp200	99	90.449	ENSRNOG00000012157	Snrnp200	99	90.559	Rattus_norvegicus
ENSACLG00000011188	snrnp200	99	90.403	ENSRBIG00000044690	-	99	90.512	Rhinopithecus_bieti
ENSACLG00000011188	snrnp200	99	90.403	ENSRROG00000037952	-	99	90.512	Rhinopithecus_roxellana
ENSACLG00000011188	snrnp200	99	90.356	ENSSBOG00000035471	SNRNP200	99	90.465	Saimiri_boliviensis_boliviensis
ENSACLG00000011188	snrnp200	97	90.179	ENSSHAG00000000758	SNRNP200	99	90.249	Sarcophilus_harrisii
ENSACLG00000011188	snrnp200	99	95.113	ENSSFOG00015018826	snrnp200	99	95.113	Scleropages_formosus
ENSACLG00000011188	snrnp200	100	97.425	ENSSMAG00000005463	snrnp200	100	97.425	Scophthalmus_maximus
ENSACLG00000011188	snrnp200	100	97.800	ENSSDUG00000021410	snrnp200	100	97.800	Seriola_dumerili
ENSACLG00000011188	snrnp200	100	97.612	ENSSLDG00000010884	snrnp200	100	97.612	Seriola_lalandi_dorsalis
ENSACLG00000011188	snrnp200	95	87.936	ENSSARG00000010728	SNRNP200	96	87.903	Sorex_araneus
ENSACLG00000011188	snrnp200	99	90.777	ENSSPUG00000003726	-	99	90.841	Sphenodon_punctatus
ENSACLG00000011188	snrnp200	100	97.987	ENSSPAG00000001842	snrnp200	100	97.987	Stegastes_partitus
ENSACLG00000011188	snrnp200	99	90.496	ENSSSCG00000008127	SNRNP200	99	90.606	Sus_scrofa
ENSACLG00000011188	snrnp200	99	82.342	ENSTGUG00000014475	-	100	82.270	Taeniopygia_guttata
ENSACLG00000011188	snrnp200	100	96.489	ENSTRUG00000001307	snrnp200	100	96.489	Takifugu_rubripes
ENSACLG00000011188	snrnp200	99	91.415	ENSTNIG00000004320	snrnp200	99	84.381	Tetraodon_nigroviridis
ENSACLG00000011188	snrnp200	82	92.488	ENSTBEG00000003329	-	67	92.488	Tupaia_belangeri
ENSACLG00000011188	snrnp200	99	90.262	ENSTTRG00000004983	SNRNP200	99	90.371	Tursiops_truncatus
ENSACLG00000011188	snrnp200	81	82.492	ENSUAMG00000008395	-	95	83.236	Ursus_americanus
ENSACLG00000011188	snrnp200	99	90.496	ENSUMAG00000012385	SNRNP200	99	90.606	Ursus_maritimus
ENSACLG00000011188	snrnp200	87	93.361	ENSVPAG00000006434	SNRNP200	66	93.361	Vicugna_pacos
ENSACLG00000011188	snrnp200	99	90.285	ENSVVUG00000026247	SNRNP200	99	90.394	Vulpes_vulpes
ENSACLG00000011188	snrnp200	99	90.318	ENSXETG00000001243	snrnp200	99	90.380	Xenopus_tropicalis
ENSACLG00000011188	snrnp200	97	96.999	ENSXMAG00000002058	snrnp200	98	96.999	Xiphophorus_maculatus