EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011312 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 11182 bases
Position: chr14:30097244-30108425
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000016602	RVT_1	PF00078.27	1.2e-38	1	1
ENSACLP00000016600	zf-CCHC	PF00098.23	1.8e-18	1	2
ENSACLP00000016600	zf-CCHC	PF00098.23	1.8e-18	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000016993	-	516	-	ENSACLP00000016600	171 (aa)	-	-
ENSACLT00000016995	-	2189	-	ENSACLP00000016602	680 (aa)	-	-

Gene Model

Click here to download ENSACLG00000011312's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011312's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011312	-	56	30.749	ENSACLG00000019432	-	85	30.749
ENSACLG00000011312	-	64	44.286	ENSACLG00000006926	cnbpa	64	41.304
ENSACLG00000011312	-	55	33.947	ENSACLG00000005315	-	83	33.947
ENSACLG00000011312	-	61	30.714	ENSACLG00000008786	-	52	30.714
ENSACLG00000011312	-	61	31.905	ENSACLG00000020885	-	52	31.905
ENSACLG00000011312	-	90	82.803	ENSACLG00000011307	-	93	82.803
ENSACLG00000011312	-	53	32.231	ENSACLG00000003896	-	65	32.231
ENSACLG00000011312	-	61	31.754	ENSACLG00000011463	-	51	31.754
ENSACLG00000011312	-	75	80.645	ENSACLG00000019787	-	92	80.645
ENSACLG00000011312	-	61	30.000	ENSACLG00000020106	-	53	30.000
ENSACLG00000011312	-	76	32.836	ENSACLG00000014860	-	63	32.836
ENSACLG00000011312	-	92	87.778	ENSACLG00000019919	-	64	87.778
ENSACLG00000011312	-	92	88.060	ENSACLG00000011316	-	52	88.060
ENSACLG00000011312	-	61	30.118	ENSACLG00000027045	-	50	30.118
ENSACLG00000011312	-	55	32.454	ENSACLG00000010837	-	92	32.454
ENSACLG00000011312	-	64	42.017	ENSACLG00000014402	cnbpb	94	40.441
ENSACLG00000011312	-	92	86.567	ENSACLG00000014014	-	51	86.567
ENSACLG00000011312	-	82	85.417	ENSACLG00000015919	-	84	85.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011312	-	61	31.517	ENSAOCG00000013559	-	51	31.517	Amphiprion_ocellaris
ENSACLG00000011312	-	59	31.296	ENSAOCG00000022482	-	51	31.296	Amphiprion_ocellaris
ENSACLG00000011312	-	51	34.734	ENSACAG00000010816	-	99	34.734	Anolis_carolinensis
ENSACLG00000011312	-	57	31.186	ENSAMXG00000038901	-	81	31.186	Astyanax_mexicanus
ENSACLG00000011312	-	62	30.569	ENSAMXG00000035718	-	77	30.569	Astyanax_mexicanus
ENSACLG00000011312	-	52	38.655	ENSCVAG00000007707	-	53	38.655	Cyprinodon_variegatus
ENSACLG00000011312	-	59	31.873	ENSDARG00000086420	CABZ01046949.1	52	31.873	Danio_rerio
ENSACLG00000011312	-	70	32.114	ENSDARG00000103562	CU462878.2	54	32.114	Danio_rerio
ENSACLG00000011312	-	55	33.867	ENSELUG00000002589	-	79	33.867	Esox_lucius
ENSACLG00000011312	-	99	74.926	ENSHBUG00000020853	-	90	74.926	Haplochromis_burtoni
ENSACLG00000011312	-	59	30.392	ENSKMAG00000015028	-	51	30.392	Kryptolebias_marmoratus
ENSACLG00000011312	-	60	32.767	ENSLACG00000022265	-	53	32.767	Latimeria_chalumnae
ENSACLG00000011312	-	51	40.115	ENSLOCG00000000179	-	53	40.115	Lepisosteus_oculatus
ENSACLG00000011312	-	53	33.058	ENSMZEG00005006211	-	89	33.058	Maylandia_zebra
ENSACLG00000011312	-	60	31.971	ENSMZEG00005011529	-	77	31.971	Maylandia_zebra
ENSACLG00000011312	-	60	31.971	ENSMZEG00005017030	-	78	31.971	Maylandia_zebra
ENSACLG00000011312	-	61	32.143	ENSMZEG00005015509	-	53	32.143	Maylandia_zebra
ENSACLG00000011312	-	60	72.660	ENSONIG00000021275	-	55	72.660	Oreochromis_niloticus
ENSACLG00000011312	-	59	30.713	ENSORLG00000028706	-	81	30.713	Oryzias_latipes
ENSACLG00000011312	-	61	31.604	ENSORLG00000030415	-	52	31.604	Oryzias_latipes
ENSACLG00000011312	-	53	31.978	ENSORLG00000028976	-	97	33.243	Oryzias_latipes
ENSACLG00000011312	-	61	30.238	ENSORLG00020003980	-	50	30.238	Oryzias_latipes_hni
ENSACLG00000011312	-	53	31.579	ENSORLG00020018629	-	95	31.579	Oryzias_latipes_hni
ENSACLG00000011312	-	53	31.025	ENSORLG00020007779	-	96	31.025	Oryzias_latipes_hni
ENSACLG00000011312	-	52	30.726	ENSORLG00020016429	-	69	30.726	Oryzias_latipes_hni
ENSACLG00000011312	-	54	30.481	ENSORLG00020017925	-	66	30.481	Oryzias_latipes_hni
ENSACLG00000011312	-	61	31.395	ENSORLG00020010757	-	51	31.395	Oryzias_latipes_hni
ENSACLG00000011312	-	58	32.832	ENSORLG00020014626	-	74	32.832	Oryzias_latipes_hni
ENSACLG00000011312	-	59	30.049	ENSORLG00015006862	-	51	30.049	Oryzias_latipes_hsok
ENSACLG00000011312	-	56	30.809	ENSORLG00015007703	-	98	30.809	Oryzias_latipes_hsok
ENSACLG00000011312	-	59	30.296	ENSORLG00015015728	-	51	30.296	Oryzias_latipes_hsok
ENSACLG00000011312	-	51	33.333	ENSPMEG00000004673	-	89	33.333	Poecilia_mexicana
ENSACLG00000011312	-	59	30.318	ENSPNAG00000014375	-	99	30.318	Pygocentrus_nattereri
ENSACLG00000011312	-	55	31.496	ENSSPAG00000000151	-	82	31.496	Stegastes_partitus
ENSACLG00000011312	-	61	30.323	ENSXETG00000032308	-	51	30.323	Xenopus_tropicalis
ENSACLG00000011312	-	61	30.496	ENSXETG00000034134	-	56	30.496	Xenopus_tropicalis