EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011484 (Gene tree)
Gene ID: 113028741
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 12606 bases
Position: chr9:7473877-7486482
Accession: 113028741
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000016864	MMR_HSR1	PF01926.23	1.2e-07	1	1
ENSACLP00000016867	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000017274	-	3526	-	ENSACLP00000016864	204 (aa)	XP_026034944	UPI0003AF6D46
ENSACLT00000017277	-	543	-	ENSACLP00000016867	180 (aa)	-	UPI0003AF93FB

Gene Model

Click here to download ENSACLG00000011484's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011484's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011484	rab18a	77	32.716	ENSACLG00000008646	rheb	85	32.716
ENSACLG00000011484	rab18a	86	33.520	ENSACLG00000025632	rabl2	79	33.520
ENSACLG00000011484	rab18a	79	37.952	ENSACLG00000004795	rab9b	75	37.952
ENSACLG00000011484	rab18a	90	40.642	ENSACLG00000018066	rab5aa	86	40.642
ENSACLG00000011484	rab18a	79	50.000	ENSACLG00000013734	-	76	50.000
ENSACLG00000011484	rab18a	80	45.732	ENSACLG00000001646	-	77	45.732
ENSACLG00000011484	rab18a	99	85.294	ENSACLG00000015289	rab18b	99	85.294
ENSACLG00000011484	rab18a	79	31.707	ENSACLG00000009103	si:cabz01085950.1	81	31.707
ENSACLG00000011484	rab18a	79	32.530	ENSACLG00000004019	dnajc27	61	32.530
ENSACLG00000011484	rab18a	80	37.126	ENSACLG00000024456	-	80	37.126
ENSACLG00000011484	rab18a	82	35.294	ENSACLG00000007804	si:ch73-116o1.2	81	35.294
ENSACLG00000011484	rab18a	82	44.379	ENSACLG00000010268	rab11al	78	44.379
ENSACLG00000011484	rab18a	52	36.111	ENSACLG00000014417	RAP2B	89	36.975
ENSACLG00000011484	rab18a	82	44.643	ENSACLG00000026336	rab15	77	44.643
ENSACLG00000011484	rab18a	80	41.212	ENSACLG00000021470	rab22a	85	41.212
ENSACLG00000011484	rab18a	79	45.679	ENSACLG00000005446	-	74	45.679
ENSACLG00000011484	rab18a	93	44.845	ENSACLG00000013668	rab1ba	96	44.845
ENSACLG00000011484	rab18a	80	39.394	ENSACLG00000007514	rab42a	76	39.394
ENSACLG00000011484	rab18a	79	36.747	ENSACLG00000006647	rab9a	82	36.747
ENSACLG00000011484	rab18a	80	43.636	ENSACLG00000002706	rab5c	83	42.051
ENSACLG00000011484	rab18a	79	43.210	ENSACLG00000018262	rab25a	77	43.210
ENSACLG00000011484	rab18a	84	38.728	ENSACLG00000009468	RAB39B	81	38.728
ENSACLG00000011484	rab18a	84	36.628	ENSACLG00000002819	rab23	72	36.628
ENSACLG00000011484	rab18a	81	32.530	ENSACLG00000001181	hrasb	87	32.530
ENSACLG00000011484	rab18a	71	40.816	ENSACLG00000027006	zgc:101559	62	40.816
ENSACLG00000011484	rab18a	97	36.364	ENSACLG00000025138	rab6ba	95	36.364
ENSACLG00000011484	rab18a	83	39.181	ENSACLG00000019423	rab41	79	39.181
ENSACLG00000011484	rab18a	80	37.725	ENSACLG00000024502	-	81	37.725
ENSACLG00000011484	rab18a	79	45.062	ENSACLG00000001775	rab11a	75	45.062
ENSACLG00000011484	rab18a	79	45.679	ENSACLG00000007076	rab11bb	74	45.679
ENSACLG00000011484	rab18a	97	36.869	ENSACLG00000026487	rab6bb	95	36.869
ENSACLG00000011484	rab18a	85	34.091	ENSACLG00000005093	rab34a	66	34.091
ENSACLG00000011484	rab18a	83	40.116	ENSACLG00000027590	-	81	40.116
ENSACLG00000011484	rab18a	81	43.373	ENSACLG00000018852	-	75	43.373
ENSACLG00000011484	rab18a	81	49.701	ENSACLG00000003326	-	82	49.701
ENSACLG00000011484	rab18a	93	38.265	ENSACLG00000021547	rab33a	53	42.857
ENSACLG00000011484	rab18a	89	30.978	ENSACLG00000027677	KRAS	97	30.978
ENSACLG00000011484	rab18a	79	43.210	ENSACLG00000010251	rab25b	78	43.210
ENSACLG00000011484	rab18a	74	34.868	ENSACLG00000011249	rras	83	35.366
ENSACLG00000011484	rab18a	95	45.918	ENSACLG00000007644	rab1ab	97	45.918
ENSACLG00000011484	rab18a	80	47.273	ENSACLG00000006329	-	76	47.273
ENSACLG00000011484	rab18a	80	37.725	ENSACLG00000018847	RAB7A	81	37.725
ENSACLG00000011484	rab18a	83	38.235	ENSACLG00000001218	RAB17	74	38.235
ENSACLG00000011484	rab18a	89	42.308	ENSACLG00000008615	-	79	42.308
ENSACLG00000011484	rab18a	72	41.447	ENSACLG00000010965	-	63	41.447
ENSACLG00000011484	rab18a	64	32.061	ENSACLG00000000922	arl5c	76	32.061
ENSACLG00000011484	rab18a	83	40.116	ENSACLG00000022893	-	81	40.116
ENSACLG00000011484	rab18a	73	40.000	ENSACLG00000005720	rab33ba	63	40.000
ENSACLG00000011484	rab18a	88	44.865	ENSACLG00000019643	-	90	44.865
ENSACLG00000011484	rab18a	84	50.867	ENSACLG00000023526	rab30	84	50.867
ENSACLG00000011484	rab18a	79	46.296	ENSACLG00000005420	rab11ba	74	46.296
ENSACLG00000011484	rab18a	82	42.012	ENSACLG00000000860	-	75	42.012
ENSACLG00000011484	rab18a	74	35.484	ENSACLG00000008602	RAB29	94	35.484
ENSACLG00000011484	rab18a	80	48.485	ENSACLG00000013505	-	76	48.485
ENSACLG00000011484	rab18a	74	33.987	ENSACLG00000005733	rab34b	58	33.987
ENSACLG00000011484	rab18a	85	33.520	ENSACLG00000003898	rab32b	82	33.520
ENSACLG00000011484	rab18a	79	48.780	ENSACLG00000007696	rab12	67	48.780
ENSACLG00000011484	rab18a	89	30.978	ENSACLG00000027515	KRAS	97	30.978
ENSACLG00000011484	rab18a	75	48.387	ENSACLG00000018721	si:dkey-16l2.16	73	48.387
ENSACLG00000011484	rab18a	85	37.853	ENSACLG00000021109	si:dkey-13a21.4	83	37.853

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011484	rab18a	100	98.039	ENSAPOG00000010760	rab18a	100	98.039	Acanthochromis_polyacanthus
ENSACLG00000011484	rab18a	100	98.333	ENSACIG00000009617	rab18a	100	98.333	Amphilophus_citrinellus
ENSACLG00000011484	rab18a	100	98.529	ENSAOCG00000016233	rab18a	100	98.529	Amphiprion_ocellaris
ENSACLG00000011484	rab18a	100	98.529	ENSAPEG00000005392	rab18a	100	98.529	Amphiprion_percula
ENSACLG00000011484	rab18a	100	96.569	ENSATEG00000021911	rab18a	100	96.569	Anabas_testudineus
ENSACLG00000011484	rab18a	100	86.341	ENSACAG00000005463	-	100	86.341	Anolis_carolinensis
ENSACLG00000011484	rab18a	100	84.466	ENSCPBG00000015839	-	100	84.466	Chrysemys_picta_bellii
ENSACLG00000011484	rab18a	96	69.652	ENSCPBG00000027619	-	98	69.652	Chrysemys_picta_bellii
ENSACLG00000011484	rab18a	97	74.372	ENSCING00000006838	-	99	74.372	Ciona_intestinalis
ENSACLG00000011484	rab18a	97	73.367	ENSCSAVG00000010348	-	99	73.367	Ciona_savignyi
ENSACLG00000011484	rab18a	100	95.098	ENSCSEG00000011816	rab18a	100	95.098	Cynoglossus_semilaevis
ENSACLG00000011484	rab18a	96	94.898	ENSCVAG00000015451	rab18a	100	94.608	Cyprinodon_variegatus
ENSACLG00000011484	rab18a	100	81.951	ENSDARG00000055291	rab18a	100	81.951	Danio_rerio
ENSACLG00000011484	rab18a	100	91.707	ENSELUG00000003805	rab18a	100	91.707	Esox_lucius
ENSACLG00000011484	rab18a	100	96.078	ENSFHEG00000019455	rab18a	100	96.078	Fundulus_heteroclitus
ENSACLG00000011484	rab18a	100	94.608	ENSGAFG00000002790	rab18a	100	94.608	Gambusia_affinis
ENSACLG00000011484	rab18a	100	84.466	ENSGAGG00000015642	-	100	84.466	Gopherus_agassizii
ENSACLG00000011484	rab18a	100	100.000	ENSHBUG00000001518	rab18a	100	100.000	Haplochromis_burtoni
ENSACLG00000011484	rab18a	99	97.537	ENSLBEG00000005861	rab18a	95	97.537	Labrus_bergylta
ENSACLG00000011484	rab18a	93	87.895	ENSLACG00000009310	rab18a	100	85.922	Latimeria_chalumnae
ENSACLG00000011484	rab18a	100	88.293	ENSLOCG00000007491	rab18a	100	88.293	Lepisosteus_oculatus
ENSACLG00000011484	rab18a	100	94.608	ENSMAMG00000014320	rab18a	100	94.608	Mastacembelus_armatus
ENSACLG00000011484	rab18a	100	99.510	ENSMZEG00005017235	rab18a	100	99.510	Maylandia_zebra
ENSACLG00000011484	rab18a	100	97.059	ENSMALG00000009813	rab18a	100	97.059	Monopterus_albus
ENSACLG00000011484	rab18a	100	100.000	ENSNBRG00000013507	rab18a	100	100.000	Neolamprologus_brichardi
ENSACLG00000011484	rab18a	100	96.569	ENSORLG00000004624	rab18a	100	96.569	Oryzias_latipes
ENSACLG00000011484	rab18a	100	97.059	ENSORLG00020008333	rab18a	100	97.059	Oryzias_latipes_hni
ENSACLG00000011484	rab18a	100	96.078	ENSORLG00015004739	rab18a	100	96.078	Oryzias_latipes_hsok
ENSACLG00000011484	rab18a	100	96.569	ENSOMEG00000020605	rab18a	100	96.569	Oryzias_melastigma
ENSACLG00000011484	rab18a	100	87.317	ENSPKIG00000009825	rab18a	100	87.317	Paramormyrops_kingsleyae
ENSACLG00000011484	rab18a	100	93.627	ENSPMGG00000020409	-	100	93.627	Periophthalmus_magnuspinnatus
ENSACLG00000011484	rab18a	100	95.098	ENSPFOG00000007571	rab18a	100	95.098	Poecilia_formosa
ENSACLG00000011484	rab18a	100	95.098	ENSPLAG00000010104	rab18a	100	95.098	Poecilia_latipinna
ENSACLG00000011484	rab18a	100	95.098	ENSPMEG00000013085	rab18a	100	95.098	Poecilia_mexicana
ENSACLG00000011484	rab18a	100	95.098	ENSPREG00000005923	rab18a	83	95.098	Poecilia_reticulata
ENSACLG00000011484	rab18a	100	100.000	ENSPNYG00000007064	rab18a	100	100.000	Pundamilia_nyererei
ENSACLG00000011484	rab18a	99	80.597	ENSPNAG00000011548	rab18a	100	80.597	Pygocentrus_nattereri
ENSACLG00000011484	rab18a	100	90.244	ENSSFOG00015017444	rab18a	84	90.244	Scleropages_formosus
ENSACLG00000011484	rab18a	94	94.301	ENSSMAG00000002969	rab18a	100	94.146	Scophthalmus_maximus
ENSACLG00000011484	rab18a	100	96.569	ENSSDUG00000003823	rab18a	100	96.569	Seriola_dumerili
ENSACLG00000011484	rab18a	100	96.569	ENSSLDG00000006977	rab18a	100	96.569	Seriola_lalandi_dorsalis
ENSACLG00000011484	rab18a	93	88.360	ENSSPUG00000017677	-	100	85.922	Sphenodon_punctatus
ENSACLG00000011484	rab18a	100	92.647	ENSTRUG00000004984	rab18a	100	92.647	Takifugu_rubripes
ENSACLG00000011484	rab18a	100	86.893	ENSUMAG00000015574	-	100	86.893	Ursus_maritimus
ENSACLG00000011484	rab18a	100	86.408	ENSXETG00000004556	rab18	100	86.893	Xenopus_tropicalis
ENSACLG00000011484	rab18a	100	95.098	ENSXMAG00000024122	rab18a	100	95.098	Xiphophorus_maculatus