EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011507 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 3942 bases
Position: chr4:22859766-22863707
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000016903	RVT_1	PF00078.27	1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000017314	-	3942	-	ENSACLP00000016903	1093 (aa)	-	-

Gene Model

Click here to download ENSACLG00000011507's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011507's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011507	-	77	98.210	ENSACLG00000021406	-	97	98.210
ENSACLG00000011507	-	70	99.086	ENSACLG00000005419	-	99	99.086
ENSACLG00000011507	-	73	98.755	ENSACLG00000023336	-	99	98.755
ENSACLG00000011507	-	100	99.268	ENSACLG00000019948	-	100	99.268
ENSACLG00000011507	-	93	98.822	ENSACLG00000021834	-	100	98.822
ENSACLG00000011507	-	76	97.593	ENSACLG00000021830	-	98	97.593
ENSACLG00000011507	-	82	99.215	ENSACLG00000016654	-	99	99.215
ENSACLG00000011507	-	77	99.405	ENSACLG00000022824	-	100	99.405
ENSACLG00000011507	-	100	98.994	ENSACLG00000007447	-	100	98.994
ENSACLG00000011507	-	93	98.921	ENSACLG00000013988	-	100	98.921
ENSACLG00000011507	-	85	99.030	ENSACLG00000003607	-	93	99.030
ENSACLG00000011507	-	99	97.419	ENSACLG00000007511	-	100	97.419
ENSACLG00000011507	-	93	99.706	ENSACLG00000017606	-	100	99.706
ENSACLG00000011507	-	73	99.128	ENSACLG00000014939	-	99	99.128
ENSACLG00000011507	-	85	98.922	ENSACLG00000025178	-	100	98.922
ENSACLG00000011507	-	93	99.216	ENSACLG00000016079	-	100	99.216
ENSACLG00000011507	-	69	98.549	ENSACLG00000004963	-	99	98.549
ENSACLG00000011507	-	100	99.451	ENSACLG00000014121	-	100	99.451
ENSACLG00000011507	-	100	99.178	ENSACLG00000013632	-	100	99.178
ENSACLG00000011507	-	100	98.994	ENSACLG00000009407	-	100	98.994
ENSACLG00000011507	-	80	98.278	ENSACLG00000013139	-	100	98.278
ENSACLG00000011507	-	68	98.797	ENSACLG00000017721	-	98	98.797
ENSACLG00000011507	-	98	99.349	ENSACLG00000017392	-	100	99.349
ENSACLG00000011507	-	100	99.451	ENSACLG00000022388	-	100	99.451
ENSACLG00000011507	-	86	99.255	ENSACLG00000013574	-	99	99.255
ENSACLG00000011507	-	85	99.245	ENSACLG00000018006	-	100	99.245
ENSACLG00000011507	-	92	97.109	ENSACLG00000013967	-	100	97.109
ENSACLG00000011507	-	91	98.392	ENSACLG00000002775	-	100	98.392
ENSACLG00000011507	-	85	98.168	ENSACLG00000009148	-	100	98.168
ENSACLG00000011507	-	70	98.686	ENSACLG00000027475	-	100	98.686
ENSACLG00000011507	-	69	98.813	ENSACLG00000006057	-	99	98.813
ENSACLG00000011507	-	100	99.268	ENSACLG00000003757	-	100	99.268
ENSACLG00000011507	-	100	98.811	ENSACLG00000002396	-	100	98.811
ENSACLG00000011507	-	99	98.442	ENSACLG00000019821	-	99	98.442

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011507	-	50	34.446	ENSLACG00000016962	-	100	40.244	Latimeria_chalumnae
ENSACLG00000011507	-	78	32.605	ENSLACG00000012377	-	98	32.605	Latimeria_chalumnae
ENSACLG00000011507	-	51	36.760	ENSLACG00000004832	-	100	36.760	Latimeria_chalumnae
ENSACLG00000011507	-	59	45.385	ENSLACG00000012911	-	98	45.525	Latimeria_chalumnae
ENSACLG00000011507	-	59	39.637	ENSLACG00000004233	-	99	39.637	Latimeria_chalumnae
ENSACLG00000011507	-	55	34.824	ENSLACG00000006107	-	99	34.185	Latimeria_chalumnae
ENSACLG00000011507	-	73	37.884	ENSLACG00000013644	-	99	37.884	Latimeria_chalumnae
ENSACLG00000011507	-	87	98.951	ENSMZEG00005028496	-	96	98.951	Maylandia_zebra
ENSACLG00000011507	-	98	76.438	ENSORLG00000026631	-	99	76.438	Oryzias_latipes
ENSACLG00000011507	-	72	80.563	ENSORLG00000023528	-	99	80.563	Oryzias_latipes
ENSACLG00000011507	-	80	80.734	ENSORLG00000027125	-	100	80.734	Oryzias_latipes
ENSACLG00000011507	-	75	81.098	ENSORLG00000022216	-	100	81.098	Oryzias_latipes
ENSACLG00000011507	-	98	76.323	ENSORLG00000025841	-	99	76.323	Oryzias_latipes
ENSACLG00000011507	-	98	76.438	ENSORLG00000028038	-	99	76.438	Oryzias_latipes
ENSACLG00000011507	-	98	74.836	ENSORLG00000028428	-	94	74.836	Oryzias_latipes
ENSACLG00000011507	-	76	81.522	ENSORLG00000025660	-	99	81.522	Oryzias_latipes
ENSACLG00000011507	-	80	80.390	ENSORLG00000028072	-	100	80.390	Oryzias_latipes
ENSACLG00000011507	-	85	79.203	ENSORLG00000023099	-	100	79.203	Oryzias_latipes
ENSACLG00000011507	-	98	76.809	ENSORLG00020010783	-	99	76.809	Oryzias_latipes_hni
ENSACLG00000011507	-	80	80.505	ENSORLG00020020703	-	100	80.505	Oryzias_latipes_hni
ENSACLG00000011507	-	80	80.734	ENSORLG00020020895	-	100	80.734	Oryzias_latipes_hni
ENSACLG00000011507	-	76	81.522	ENSORLG00020006197	-	99	81.522	Oryzias_latipes_hni
ENSACLG00000011507	-	95	75.816	ENSORLG00020004983	-	99	75.816	Oryzias_latipes_hni
ENSACLG00000011507	-	97	77.674	ENSPREG00000022240	-	98	77.674	Poecilia_reticulata
ENSACLG00000011507	-	76	81.983	ENSXMAG00000021428	-	99	81.983	Xiphophorus_maculatus