EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011720 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 56163 bases
Position: chr18:12561347-12617509
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000017208	RRM_1	PF00076.22	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000017622	-	3341	-	ENSACLP00000017208	291 (aa)	-	UPI0003AF9E26

Gene Model

Click here to download ENSACLG00000011720's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011720's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011720	-	100	73.986	ENSACLG00000006949	-	100	73.986
ENSACLG00000011720	-	76	63.964	ENSACLG00000007561	raly	87	55.405
ENSACLG00000011720	-	80	53.361	ENSACLG00000005707	-	91	49.823
ENSACLG00000011720	-	75	56.889	ENSACLG00000000995	-	91	46.758
ENSACLG00000011720	-	74	54.299	ENSACLG00000013636	-	88	47.857

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011720	-	100	95.548	ENSAPOG00000008744	-	100	95.548	Acanthochromis_polyacanthus
ENSACLG00000011720	-	97	86.897	ENSACIG00000007143	-	97	86.897	Amphilophus_citrinellus
ENSACLG00000011720	-	100	97.945	ENSAOCG00000023599	-	100	97.945	Amphiprion_ocellaris
ENSACLG00000011720	-	100	74.237	ENSAOCG00000001605	-	100	74.237	Amphiprion_ocellaris
ENSACLG00000011720	-	97	91.497	ENSATEG00000022219	-	93	91.497	Anabas_testudineus
ENSACLG00000011720	-	82	75.210	ENSATEG00000023356	-	91	75.210	Anabas_testudineus
ENSACLG00000011720	-	100	73.311	ENSAMXG00000019031	-	100	72.391	Astyanax_mexicanus
ENSACLG00000011720	-	100	64.646	ENSAMXG00000032617	-	100	64.983	Astyanax_mexicanus
ENSACLG00000011720	-	100	81.849	ENSCSEG00000014237	-	100	81.849	Cynoglossus_semilaevis
ENSACLG00000011720	-	100	94.521	ENSCVAG00000013624	-	100	94.863	Cyprinodon_variegatus
ENSACLG00000011720	-	100	73.898	ENSCVAG00000018104	-	100	74.237	Cyprinodon_variegatus
ENSACLG00000011720	-	59	76.023	ENSDARG00000090292	ralyl	81	79.012	Danio_rerio
ENSACLG00000011720	-	93	63.504	ENSELUG00000001702	-	96	63.309	Esox_lucius
ENSACLG00000011720	-	57	72.121	ENSGMOG00000005914	-	100	72.121	Gadus_morhua
ENSACLG00000011720	-	61	78.090	ENSGACG00000004991	-	91	81.928	Gasterosteus_aculeatus
ENSACLG00000011720	-	100	99.658	ENSHBUG00000010040	-	100	99.658	Haplochromis_burtoni
ENSACLG00000011720	-	100	73.986	ENSHBUG00000015412	-	100	73.986	Haplochromis_burtoni
ENSACLG00000011720	-	100	73.559	ENSIPUG00000000507	ralyl	100	74.237	Ictalurus_punctatus
ENSACLG00000011720	-	100	73.559	ENSKMAG00000018155	-	100	74.576	Kryptolebias_marmoratus
ENSACLG00000011720	-	100	90.753	ENSKMAG00000022093	-	100	91.438	Kryptolebias_marmoratus
ENSACLG00000011720	-	100	92.466	ENSLBEG00000012873	-	100	92.466	Labrus_bergylta
ENSACLG00000011720	-	100	72.203	ENSLBEG00000011011	-	100	73.220	Labrus_bergylta
ENSACLG00000011720	-	100	70.169	ENSLOCG00000012787	ralyl	99	69.492	Lepisosteus_oculatus
ENSACLG00000011720	-	99	89.310	ENSMAMG00000001723	-	97	87.889	Mastacembelus_armatus
ENSACLG00000011720	-	98	71.088	ENSMZEG00005018748	-	99	71.088	Maylandia_zebra
ENSACLG00000011720	-	100	100.000	ENSMZEG00005024447	-	100	100.000	Maylandia_zebra
ENSACLG00000011720	-	97	85.135	ENSMMOG00000020441	-	86	87.500	Mola_mola
ENSACLG00000011720	-	100	94.863	ENSMALG00000019019	-	78	94.863	Monopterus_albus
ENSACLG00000011720	-	100	72.542	ENSMALG00000012952	-	100	72.542	Monopterus_albus
ENSACLG00000011720	-	98	71.088	ENSNBRG00000011376	-	99	71.088	Neolamprologus_brichardi
ENSACLG00000011720	-	97	88.621	ENSNBRG00000011206	-	97	88.621	Neolamprologus_brichardi
ENSACLG00000011720	-	100	74.237	ENSORLG00000012719	-	100	74.237	Oryzias_latipes
ENSACLG00000011720	-	100	88.699	ENSORLG00000017934	-	100	88.699	Oryzias_latipes
ENSACLG00000011720	-	100	74.237	ENSORLG00020004438	-	100	74.237	Oryzias_latipes_hni
ENSACLG00000011720	-	100	87.671	ENSORLG00020000082	-	100	87.671	Oryzias_latipes_hni
ENSACLG00000011720	-	100	74.237	ENSORLG00015004727	-	100	74.237	Oryzias_latipes_hsok
ENSACLG00000011720	-	100	88.014	ENSORLG00015004280	-	100	88.014	Oryzias_latipes_hsok
ENSACLG00000011720	-	100	74.237	ENSOMEG00000001170	-	100	74.237	Oryzias_melastigma
ENSACLG00000011720	-	100	88.356	ENSOMEG00000011821	-	100	88.356	Oryzias_melastigma
ENSACLG00000011720	-	100	73.630	ENSPKIG00000015926	-	100	73.630	Paramormyrops_kingsleyae
ENSACLG00000011720	-	99	76.610	ENSPMGG00000009532	-	99	74.915	Periophthalmus_magnuspinnatus
ENSACLG00000011720	-	78	68.534	ENSPMGG00000014481	-	95	70.563	Periophthalmus_magnuspinnatus
ENSACLG00000011720	-	97	89.456	ENSPFOG00000006120	-	99	89.796	Poecilia_formosa
ENSACLG00000011720	-	97	73.356	ENSPLAG00000011323	ralyl	100	73.356	Poecilia_latipinna
ENSACLG00000011720	-	97	84.859	ENSPLAG00000009877	-	76	84.615	Poecilia_latipinna
ENSACLG00000011720	-	97	73.356	ENSPMEG00000023847	ralyl	100	73.356	Poecilia_mexicana
ENSACLG00000011720	-	97	84.859	ENSPMEG00000013624	-	80	84.615	Poecilia_mexicana
ENSACLG00000011720	-	97	72.318	ENSPREG00000001956	ralyl	100	72.318	Poecilia_reticulata
ENSACLG00000011720	-	97	93.993	ENSPREG00000013805	-	100	88.141	Poecilia_reticulata
ENSACLG00000011720	-	98	71.088	ENSPNYG00000003548	-	99	71.088	Pundamilia_nyererei
ENSACLG00000011720	-	97	88.621	ENSPNYG00000008772	-	97	88.621	Pundamilia_nyererei
ENSACLG00000011720	-	100	67.354	ENSPNAG00000026098	-	100	67.354	Pygocentrus_nattereri
ENSACLG00000011720	-	100	72.881	ENSPNAG00000000498	-	88	72.635	Pygocentrus_nattereri
ENSACLG00000011720	-	100	75.932	ENSSFOG00015009401	-	100	75.932	Scleropages_formosus
ENSACLG00000011720	-	97	66.316	ENSSFOG00015004575	-	96	67.018	Scleropages_formosus
ENSACLG00000011720	-	100	73.311	ENSSMAG00000005608	-	100	73.311	Scophthalmus_maximus
ENSACLG00000011720	-	97	90.141	ENSSMAG00000015907	-	93	90.141	Scophthalmus_maximus
ENSACLG00000011720	-	100	73.898	ENSSDUG00000007587	-	100	73.898	Seriola_dumerili
ENSACLG00000011720	-	100	97.260	ENSSDUG00000012473	-	100	97.260	Seriola_dumerili
ENSACLG00000011720	-	100	72.542	ENSSLDG00000020603	-	100	73.220	Seriola_lalandi_dorsalis
ENSACLG00000011720	-	100	96.918	ENSSLDG00000011534	-	100	96.918	Seriola_lalandi_dorsalis
ENSACLG00000011720	-	100	79.381	ENSSPAG00000013858	-	96	79.381	Stegastes_partitus
ENSACLG00000011720	-	97	89.007	ENSTRUG00000003829	-	95	87.589	Takifugu_rubripes
ENSACLG00000011720	-	97	84.983	ENSTNIG00000005594	-	99	84.983	Tetraodon_nigroviridis
ENSACLG00000011720	-	100	65.657	ENSXETG00000017729	ralyl	99	66.330	Xenopus_tropicalis
ENSACLG00000011720	-	97	71.044	ENSXCOG00000015156	-	93	71.044	Xiphophorus_couchianus
ENSACLG00000011720	-	100	74.576	ENSXMAG00000008396	-	100	74.576	Xiphophorus_maculatus
ENSACLG00000011720	-	100	94.178	ENSXMAG00000007614	-	100	94.178	Xiphophorus_maculatus