EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011835 (Gene tree)
Gene ID: 113016282
Gene Symbol: pcbp3
Alias: -
Full Name: poly(rC)-binding protein 3-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 28063 bases
Position: chr23:23849537-23877599
Accession: 113016282
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000017325	KH_1	PF00013.29	2.4e-54	1	3
ENSACLP00000017325	KH_1	PF00013.29	2.4e-54	2	3
ENSACLP00000017325	KH_1	PF00013.29	2.4e-54	3	3
ENSACLP00000017325	KH_2	PF07650.17	5.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000017743	-	4563	XM_026158989	ENSACLP00000017325	352 (aa)	XP_026014774	UPI00032A3EE0

Gene Model

Click here to download ENSACLG00000011835's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011835's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011835	pcbp3	67	40.909	ENSACLG00000001424	KHSRP	56	40.909
ENSACLG00000011835	pcbp3	93	64.458	ENSACLG00000025246	-	71	64.458
ENSACLG00000011835	pcbp3	94	73.193	ENSACLG00000018264	PCBP2	96	73.193
ENSACLG00000011835	pcbp3	100	89.489	ENSACLG00000003801	-	100	89.489
ENSACLG00000011835	pcbp3	65	39.062	ENSACLG00000020487	khsrp	56	39.062
ENSACLG00000011835	pcbp3	95	35.762	ENSACLG00000000050	igf2bp3	65	35.762
ENSACLG00000011835	pcbp3	72	38.235	ENSACLG00000018329	-	82	32.558
ENSACLG00000011835	pcbp3	91	35.758	ENSACLG00000015512	igf2bp2a	71	35.000
ENSACLG00000011835	pcbp3	64	34.568	ENSACLG00000006708	fubp1	52	35.294
ENSACLG00000011835	pcbp3	72	48.649	ENSACLG00000001537	hnrpkl	55	48.649
ENSACLG00000011835	pcbp3	68	53.968	ENSACLG00000018220	hnrnpk	54	53.968
ENSACLG00000011835	pcbp3	93	63.746	ENSACLG00000013348	pcbp4	65	63.746
ENSACLG00000011835	pcbp3	95	69.254	ENSACLG00000019285	zgc:110045	72	69.254
ENSACLG00000011835	pcbp3	88	39.062	ENSACLG00000011819	fubp3	61	39.062

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011835	pcbp3	95	89.851	ENSAPOG00000020003	pcbp3	86	89.851	Acanthochromis_polyacanthus
ENSACLG00000011835	pcbp3	100	90.057	ENSAPOG00000016582	-	100	90.057	Acanthochromis_polyacanthus
ENSACLG00000011835	pcbp3	93	86.726	ENSAMEG00000001697	-	96	86.726	Ailuropoda_melanoleuca
ENSACLG00000011835	pcbp3	100	96.875	ENSACIG00000010933	pcbp3	100	96.875	Amphilophus_citrinellus
ENSACLG00000011835	pcbp3	98	86.957	ENSACIG00000002739	-	99	86.957	Amphilophus_citrinellus
ENSACLG00000011835	pcbp3	97	90.643	ENSAOCG00000008592	-	100	90.643	Amphiprion_ocellaris
ENSACLG00000011835	pcbp3	93	83.810	ENSAOCG00000007806	-	99	83.810	Amphiprion_ocellaris
ENSACLG00000011835	pcbp3	100	99.148	ENSAPEG00000008011	pcbp3	100	99.148	Amphiprion_percula
ENSACLG00000011835	pcbp3	98	86.377	ENSAPEG00000005209	-	99	86.377	Amphiprion_percula
ENSACLG00000011835	pcbp3	95	96.716	ENSATEG00000015787	-	100	96.716	Anabas_testudineus
ENSACLG00000011835	pcbp3	98	86.087	ENSATEG00000009833	-	99	86.087	Anabas_testudineus
ENSACLG00000011835	pcbp3	98	77.507	ENSAPLG00000008951	-	82	77.507	Anas_platyrhynchos
ENSACLG00000011835	pcbp3	93	85.630	ENSAPLG00000002975	-	95	85.630	Anas_platyrhynchos
ENSACLG00000011835	pcbp3	93	90.778	ENSACAG00000004607	-	96	90.778	Anolis_carolinensis
ENSACLG00000011835	pcbp3	93	86.018	ENSACAG00000009819	-	95	86.018	Anolis_carolinensis
ENSACLG00000011835	pcbp3	91	87.085	ENSANAG00000030702	-	96	87.085	Aotus_nancymaae
ENSACLG00000011835	pcbp3	94	64.103	ENSAMXG00000001760	zgc:110045	73	64.103	Astyanax_mexicanus
ENSACLG00000011835	pcbp3	100	96.023	ENSAMXG00000003440	pcbp3	100	96.023	Astyanax_mexicanus
ENSACLG00000011835	pcbp3	95	85.075	ENSAMXG00000013588	-	100	85.075	Astyanax_mexicanus
ENSACLG00000011835	pcbp3	88	86.905	ENSCAFG00020019472	-	81	86.905	Canis_lupus_dingo
ENSACLG00000011835	pcbp3	96	86.982	ENSCSAG00000007440	-	89	86.982	Chlorocebus_sabaeus
ENSACLG00000011835	pcbp3	98	86.730	ENSCPBG00000000733	-	72	86.730	Chrysemys_picta_bellii
ENSACLG00000011835	pcbp3	98	85.507	ENSCPBG00000012151	-	95	85.507	Chrysemys_picta_bellii
ENSACLG00000011835	pcbp3	95	88.060	ENSCSEG00000000822	pcbp3	99	88.060	Cynoglossus_semilaevis
ENSACLG00000011835	pcbp3	95	72.222	ENSCSEG00000016984	-	97	74.532	Cynoglossus_semilaevis
ENSACLG00000011835	pcbp3	100	89.489	ENSCVAG00000005262	-	100	89.489	Cyprinodon_variegatus
ENSACLG00000011835	pcbp3	100	98.864	ENSCVAG00000014482	pcbp3	100	98.864	Cyprinodon_variegatus
ENSACLG00000011835	pcbp3	100	96.307	ENSDARG00000054378	pcbp3	100	96.307	Danio_rerio
ENSACLG00000011835	pcbp3	93	75.076	ENSETEG00000015988	-	95	75.076	Echinops_telfairi
ENSACLG00000011835	pcbp3	93	66.887	ENSEBUG00000016192	pcbp3	99	68.493	Eptatretus_burgeri
ENSACLG00000011835	pcbp3	70	67.068	ENSEBUG00000005495	pcbp3	68	67.068	Eptatretus_burgeri
ENSACLG00000011835	pcbp3	95	73.746	ENSEBUG00000007485	-	92	73.554	Eptatretus_burgeri
ENSACLG00000011835	pcbp3	100	97.175	ENSELUG00000003521	pcbp3	100	97.175	Esox_lucius
ENSACLG00000011835	pcbp3	100	89.773	ENSELUG00000001560	-	96	85.057	Esox_lucius
ENSACLG00000011835	pcbp3	98	77.778	ENSFALG00000004411	-	77	77.778	Ficedula_albicollis
ENSACLG00000011835	pcbp3	93	88.146	ENSFALG00000003949	-	95	88.146	Ficedula_albicollis
ENSACLG00000011835	pcbp3	98	87.500	ENSFHEG00000016615	pcbp3	98	87.500	Fundulus_heteroclitus
ENSACLG00000011835	pcbp3	98	85.797	ENSFHEG00000006539	-	99	85.797	Fundulus_heteroclitus
ENSACLG00000011835	pcbp3	95	76.124	ENSGMOG00000011992	pcbp3	96	76.190	Gadus_morhua
ENSACLG00000011835	pcbp3	95	67.139	ENSGMOG00000008611	-	100	67.139	Gadus_morhua
ENSACLG00000011835	pcbp3	93	87.896	ENSGALG00000004394	-	96	87.896	Gallus_gallus
ENSACLG00000011835	pcbp3	93	86.280	ENSGALG00000013155	-	98	83.283	Gallus_gallus
ENSACLG00000011835	pcbp3	95	94.925	ENSGAFG00000011430	pcbp3	96	94.925	Gambusia_affinis
ENSACLG00000011835	pcbp3	100	89.489	ENSGAFG00000010274	-	100	89.489	Gambusia_affinis
ENSACLG00000011835	pcbp3	95	84.136	ENSGACG00000014955	-	97	84.136	Gasterosteus_aculeatus
ENSACLG00000011835	pcbp3	98	82.692	ENSGACG00000002266	-	99	82.692	Gasterosteus_aculeatus
ENSACLG00000011835	pcbp3	94	80.608	ENSGAGG00000000271	-	100	80.479	Gopherus_agassizii
ENSACLG00000011835	pcbp3	76	87.793	ENSGAGG00000006956	-	86	87.793	Gopherus_agassizii
ENSACLG00000011835	pcbp3	100	99.432	ENSHBUG00000010697	pcbp3	100	99.432	Haplochromis_burtoni
ENSACLG00000011835	pcbp3	100	89.489	ENSHBUG00000021782	-	100	89.489	Haplochromis_burtoni
ENSACLG00000011835	pcbp3	100	98.580	ENSHCOG00000017868	pcbp3	100	98.580	Hippocampus_comes
ENSACLG00000011835	pcbp3	98	83.768	ENSHCOG00000006067	-	99	83.768	Hippocampus_comes
ENSACLG00000011835	pcbp3	98	93.913	ENSIPUG00000006238	pcbp3	99	93.913	Ictalurus_punctatus
ENSACLG00000011835	pcbp3	100	88.636	ENSKMAG00000018530	-	100	88.636	Kryptolebias_marmoratus
ENSACLG00000011835	pcbp3	100	98.864	ENSKMAG00000003046	pcbp3	100	98.864	Kryptolebias_marmoratus
ENSACLG00000011835	pcbp3	96	88.757	ENSLBEG00000006201	pcbp3	96	88.757	Labrus_bergylta
ENSACLG00000011835	pcbp3	100	76.420	ENSLBEG00000006542	-	100	78.693	Labrus_bergylta
ENSACLG00000011835	pcbp3	97	85.753	ENSLACG00000010386	pcbp3	77	85.753	Latimeria_chalumnae
ENSACLG00000011835	pcbp3	98	77.596	ENSLACG00000010804	zgc:110045	77	77.596	Latimeria_chalumnae
ENSACLG00000011835	pcbp3	96	93.787	ENSLOCG00000009369	pcbp3	98	93.787	Lepisosteus_oculatus
ENSACLG00000011835	pcbp3	93	85.410	ENSLOCG00000005058	zgc:110045	80	85.410	Lepisosteus_oculatus
ENSACLG00000011835	pcbp3	95	89.552	ENSMAMG00000022336	pcbp3	93	89.552	Mastacembelus_armatus
ENSACLG00000011835	pcbp3	98	84.928	ENSMAMG00000011620	-	99	84.928	Mastacembelus_armatus
ENSACLG00000011835	pcbp3	100	97.159	ENSMZEG00005008993	pcbp3	100	97.159	Maylandia_zebra
ENSACLG00000011835	pcbp3	100	86.080	ENSMZEG00005014882	-	100	86.197	Maylandia_zebra
ENSACLG00000011835	pcbp3	94	80.172	ENSMGAG00000001883	-	96	80.172	Meleagris_gallopavo
ENSACLG00000011835	pcbp3	98	77.778	ENSMGAG00000006794	-	77	77.778	Meleagris_gallopavo
ENSACLG00000011835	pcbp3	95	88.724	ENSMMOG00000000730	pcbp3	88	88.724	Mola_mola
ENSACLG00000011835	pcbp3	98	85.507	ENSMMOG00000005216	-	99	85.507	Mola_mola
ENSACLG00000011835	pcbp3	72	85.981	ENSMODG00000027884	-	93	85.981	Monodelphis_domestica
ENSACLG00000011835	pcbp3	100	96.307	ENSMALG00000000691	pcbp3	100	96.307	Monopterus_albus
ENSACLG00000011835	pcbp3	93	78.098	ENSMPUG00000001779	-	88	78.098	Mustela_putorius_furo
ENSACLG00000011835	pcbp3	100	88.547	ENSNBRG00000016714	-	100	88.547	Neolamprologus_brichardi
ENSACLG00000011835	pcbp3	100	96.591	ENSNBRG00000016409	-	100	96.591	Neolamprologus_brichardi
ENSACLG00000011835	pcbp3	93	87.536	ENSOPRG00000003431	-	99	87.536	Ochotona_princeps
ENSACLG00000011835	pcbp3	95	94.334	ENSONIG00000012122	-	98	94.334	Oreochromis_niloticus
ENSACLG00000011835	pcbp3	98	87.826	ENSONIG00000004611	-	99	87.826	Oreochromis_niloticus
ENSACLG00000011835	pcbp3	93	87.842	ENSOCUG00000002696	-	87	87.842	Oryctolagus_cuniculus
ENSACLG00000011835	pcbp3	95	92.239	ENSORLG00000000059	pcbp3	100	92.239	Oryzias_latipes
ENSACLG00000011835	pcbp3	99	89.459	ENSORLG00000022739	-	99	89.459	Oryzias_latipes
ENSACLG00000011835	pcbp3	95	92.239	ENSORLG00020012671	pcbp3	97	92.239	Oryzias_latipes_hni
ENSACLG00000011835	pcbp3	99	89.174	ENSORLG00020006124	-	99	89.174	Oryzias_latipes_hni
ENSACLG00000011835	pcbp3	99	89.459	ENSORLG00015008051	-	99	89.459	Oryzias_latipes_hsok
ENSACLG00000011835	pcbp3	95	92.239	ENSORLG00015000429	pcbp3	97	92.239	Oryzias_latipes_hsok
ENSACLG00000011835	pcbp3	91	90.196	ENSOMEG00000020811	pcbp3	97	90.196	Oryzias_melastigma
ENSACLG00000011835	pcbp3	95	88.988	ENSOMEG00000020162	-	97	88.988	Oryzias_melastigma
ENSACLG00000011835	pcbp3	93	82.203	ENSOGAG00000008044	-	96	82.203	Otolemur_garnettii
ENSACLG00000011835	pcbp3	76	79.048	ENSPKIG00000020913	-	91	79.048	Paramormyrops_kingsleyae
ENSACLG00000011835	pcbp3	100	88.920	ENSPKIG00000019329	pcbp3	100	88.920	Paramormyrops_kingsleyae
ENSACLG00000011835	pcbp3	94	80.608	ENSPSIG00000008350	-	72	80.608	Pelodiscus_sinensis
ENSACLG00000011835	pcbp3	93	77.326	ENSPSIG00000014970	-	95	77.907	Pelodiscus_sinensis
ENSACLG00000011835	pcbp3	100	97.727	ENSPMGG00000022383	pcbp3	100	97.727	Periophthalmus_magnuspinnatus
ENSACLG00000011835	pcbp3	69	88.830	ENSPMAG00000004637	-	97	88.830	Petromyzon_marinus
ENSACLG00000011835	pcbp3	95	68.546	ENSPMAG00000004551	pcbp3	90	68.546	Petromyzon_marinus
ENSACLG00000011835	pcbp3	93	95.137	ENSPCIG00000028092	-	96	95.137	Phascolarctos_cinereus
ENSACLG00000011835	pcbp3	100	83.250	ENSPLAG00000011449	pcbp3	100	83.250	Poecilia_latipinna
ENSACLG00000011835	pcbp3	94	84.257	ENSPLAG00000004074	-	89	84.257	Poecilia_latipinna
ENSACLG00000011835	pcbp3	100	97.746	ENSPMEG00000021239	pcbp3	100	97.746	Poecilia_mexicana
ENSACLG00000011835	pcbp3	100	87.216	ENSPMEG00000006653	-	100	87.216	Poecilia_mexicana
ENSACLG00000011835	pcbp3	95	86.905	ENSPREG00000020585	-	97	86.905	Poecilia_reticulata
ENSACLG00000011835	pcbp3	95	87.834	ENSPREG00000015736	pcbp3	99	87.834	Poecilia_reticulata
ENSACLG00000011835	pcbp3	98	85.507	ENSPNYG00000013205	-	99	85.507	Pundamilia_nyererei
ENSACLG00000011835	pcbp3	95	90.149	ENSPNYG00000012326	pcbp3	95	90.149	Pundamilia_nyererei
ENSACLG00000011835	pcbp3	100	93.768	ENSPNAG00000008541	-	100	93.768	Pygocentrus_nattereri
ENSACLG00000011835	pcbp3	98	88.406	ENSPNAG00000015104	pcbp3	99	88.406	Pygocentrus_nattereri
ENSACLG00000011835	pcbp3	93	88.450	ENSRNOG00000001245	Pcbp3	95	88.450	Rattus_norvegicus
ENSACLG00000011835	pcbp3	96	78.261	ENSRBIG00000028177	-	98	78.261	Rhinopithecus_bieti
ENSACLG00000011835	pcbp3	93	84.615	ENSSHAG00000007890	-	96	83.573	Sarcophilus_harrisii
ENSACLG00000011835	pcbp3	100	94.318	ENSSFOG00015014706	pcbp3	100	94.318	Scleropages_formosus
ENSACLG00000011835	pcbp3	93	77.982	ENSSFOG00015007118	-	93	77.982	Scleropages_formosus
ENSACLG00000011835	pcbp3	100	89.489	ENSSFOG00015010205	pcbp3	100	94.030	Scleropages_formosus
ENSACLG00000011835	pcbp3	95	89.851	ENSSMAG00000011929	pcbp3	97	89.851	Scophthalmus_maximus
ENSACLG00000011835	pcbp3	100	89.205	ENSSMAG00000003135	-	100	89.205	Scophthalmus_maximus
ENSACLG00000011835	pcbp3	100	88.352	ENSSDUG00000008502	-	100	88.352	Seriola_dumerili
ENSACLG00000011835	pcbp3	95	97.015	ENSSDUG00000011608	pcbp3	99	97.015	Seriola_dumerili
ENSACLG00000011835	pcbp3	100	90.057	ENSSLDG00000020161	-	100	90.057	Seriola_lalandi_dorsalis
ENSACLG00000011835	pcbp3	95	97.015	ENSSLDG00000008518	pcbp3	99	97.015	Seriola_lalandi_dorsalis
ENSACLG00000011835	pcbp3	91	84.536	ENSSPUG00000013214	-	91	84.536	Sphenodon_punctatus
ENSACLG00000011835	pcbp3	93	83.810	ENSSPAG00000004190	-	99	83.810	Stegastes_partitus
ENSACLG00000011835	pcbp3	100	85.795	ENSSPAG00000023341	-	100	85.795	Stegastes_partitus
ENSACLG00000011835	pcbp3	93	82.371	ENSTGUG00000008158	-	96	82.371	Taeniopygia_guttata
ENSACLG00000011835	pcbp3	93	80.980	ENSTGUG00000003316	-	96	80.980	Taeniopygia_guttata
ENSACLG00000011835	pcbp3	93	87.179	ENSTRUG00000006280	-	91	87.179	Takifugu_rubripes
ENSACLG00000011835	pcbp3	100	92.045	ENSTRUG00000013604	pcbp3	100	92.045	Takifugu_rubripes
ENSACLG00000011835	pcbp3	93	88.184	ENSTTRG00000015075	-	96	88.184	Tursiops_truncatus
ENSACLG00000011835	pcbp3	93	82.997	ENSXETG00000011483	pcbp1	96	82.997	Xenopus_tropicalis
ENSACLG00000011835	pcbp3	95	76.771	ENSXETG00000010491	pcbp2	77	76.771	Xenopus_tropicalis
ENSACLG00000011835	pcbp3	100	97.746	ENSXCOG00000020481	pcbp3	100	97.746	Xiphophorus_couchianus
ENSACLG00000011835	pcbp3	100	99.148	ENSXMAG00000008175	pcbp3	100	99.148	Xiphophorus_maculatus
ENSACLG00000011835	pcbp3	100	89.773	ENSXMAG00000028711	-	100	89.773	Xiphophorus_maculatus