EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011876 (Gene tree)
Gene ID: 113027301
Gene Symbol: prdm12b
Alias: zgc:101606
Full Name: PR domain containing 12b
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 3012 bases
Position: chr7:21317646-21320657
Accession: ZDB-GENE-041114-172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000017405	zf-C2H2	PF00096.26	8.2e-13	1	2
ENSACLP00000017405	zf-C2H2	PF00096.26	8.2e-13	2	2
ENSACLP00000017405	zf-met	PF12874.7	8.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000017822	-	1059	-	ENSACLP00000017405	352 (aa)	-	-

Gene Model

Click here to download ENSACLG00000011876's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011876's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011876	prdm12b	100	75.127	ENSACLG00000007631	-	100	76.396
ENSACLG00000011876	prdm12b	68	40.909	ENSACLG00000017996	prdm5	96	41.379

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011876	prdm12b	92	81.845	ENSG00000130711	PRDM12	99	77.236	Homo_sapiens
ENSACLG00000011876	prdm12b	100	87.240	ENSAPOG00000016051	prdm12b	100	88.021	Acanthochromis_polyacanthus
ENSACLG00000011876	prdm12b	100	63.830	ENSAPOG00000018234	-	100	63.830	Acanthochromis_polyacanthus
ENSACLG00000011876	prdm12b	89	83.540	ENSAMEG00000016234	PRDM12	99	83.489	Ailuropoda_melanoleuca
ENSACLG00000011876	prdm12b	100	90.133	ENSACIG00000019578	prdm12b	100	90.133	Amphilophus_citrinellus
ENSACLG00000011876	prdm12b	100	76.823	ENSACIG00000005193	-	100	77.344	Amphilophus_citrinellus
ENSACLG00000011876	prdm12b	100	87.798	ENSAOCG00000015040	prdm12b	100	88.594	Amphiprion_ocellaris
ENSACLG00000011876	prdm12b	100	76.882	ENSAPEG00000022849	-	99	78.226	Amphiprion_percula
ENSACLG00000011876	prdm12b	100	88.770	ENSAPEG00000015092	prdm12b	100	89.572	Amphiprion_percula
ENSACLG00000011876	prdm12b	100	76.804	ENSATEG00000014595	-	98	79.941	Anabas_testudineus
ENSACLG00000011876	prdm12b	94	81.287	ENSANAG00000020616	PRDM12	99	81.287	Aotus_nancymaae
ENSACLG00000011876	prdm12b	100	82.527	ENSAMXG00000033665	prdm12b	100	82.796	Astyanax_mexicanus
ENSACLG00000011876	prdm12b	100	84.831	ENSAMXG00000008540	PRDM12	100	84.831	Astyanax_mexicanus
ENSACLG00000011876	prdm12b	92	82.440	ENSBTAG00000023797	PRDM12	99	78.512	Bos_taurus
ENSACLG00000011876	prdm12b	92	82.143	ENSCJAG00000020540	PRDM12	99	77.929	Callithrix_jacchus
ENSACLG00000011876	prdm12b	80	82.653	ENSCAFG00000023076	PRDM12	99	77.846	Canis_familiaris
ENSACLG00000011876	prdm12b	92	82.440	ENSCAFG00020024046	PRDM12	99	78.202	Canis_lupus_dingo
ENSACLG00000011876	prdm12b	92	82.440	ENSCHIG00000025005	PRDM12	99	78.571	Capra_hircus
ENSACLG00000011876	prdm12b	86	82.857	ENSCPOG00000005901	PRDM12	95	82.857	Cavia_porcellus
ENSACLG00000011876	prdm12b	92	82.143	ENSCCAG00000037485	PRDM12	99	77.929	Cebus_capucinus
ENSACLG00000011876	prdm12b	92	82.143	ENSCATG00000020327	PRDM12	99	77.929	Cercocebus_atys
ENSACLG00000011876	prdm12b	91	82.779	ENSCLAG00000005499	PRDM12	90	82.779	Chinchilla_lanigera
ENSACLG00000011876	prdm12b	92	82.143	ENSCSAG00000014756	PRDM12	99	77.929	Chlorocebus_sabaeus
ENSACLG00000011876	prdm12b	100	79.834	ENSCPBG00000022628	PRDM12	99	79.834	Chrysemys_picta_bellii
ENSACLG00000011876	prdm12b	92	82.440	ENSCGRG00001015005	Prdm12	99	77.989	Cricetulus_griseus_chok1gshd
ENSACLG00000011876	prdm12b	100	74.103	ENSCVAG00000000944	-	100	74.872	Cyprinodon_variegatus
ENSACLG00000011876	prdm12b	100	86.863	ENSCVAG00000017166	prdm12b	100	88.204	Cyprinodon_variegatus
ENSACLG00000011876	prdm12b	100	84.239	ENSDARG00000007430	prdm12b	100	84.239	Danio_rerio
ENSACLG00000011876	prdm12b	92	81.899	ENSDNOG00000042302	PRDM12	99	78.022	Dasypus_novemcinctus
ENSACLG00000011876	prdm12b	93	59.947	ENSEBUG00000016780	prdm12b	83	61.273	Eptatretus_burgeri
ENSACLG00000011876	prdm12b	94	81.287	ENSEASG00005008472	PRDM12	99	78.202	Equus_asinus_asinus
ENSACLG00000011876	prdm12b	94	80.994	ENSECAG00000005933	PRDM12	99	77.929	Equus_caballus
ENSACLG00000011876	prdm12b	100	86.648	ENSELUG00000013674	PRDM12	99	86.648	Esox_lucius
ENSACLG00000011876	prdm12b	100	80.965	ENSELUG00000009905	prdm12b	100	80.965	Esox_lucius
ENSACLG00000011876	prdm12b	92	82.440	ENSFCAG00000043086	PRDM12	99	78.202	Felis_catus
ENSACLG00000011876	prdm12b	100	80.939	ENSFALG00000001445	PRDM12	89	80.939	Ficedula_albicollis
ENSACLG00000011876	prdm12b	100	77.635	ENSFHEG00000007746	-	100	77.892	Fundulus_heteroclitus
ENSACLG00000011876	prdm12b	100	86.631	ENSFHEG00000003944	prdm12b	100	87.968	Fundulus_heteroclitus
ENSACLG00000011876	prdm12b	100	82.353	ENSGMOG00000011797	prdm12b	99	84.848	Gadus_morhua
ENSACLG00000011876	prdm12b	100	80.939	ENSGALG00000003895	PRDM12	99	80.939	Gallus_gallus
ENSACLG00000011876	prdm12b	100	85.904	ENSGAFG00000010827	prdm12b	99	86.702	Gambusia_affinis
ENSACLG00000011876	prdm12b	100	87.668	ENSGACG00000016713	prdm12b	99	87.668	Gasterosteus_aculeatus
ENSACLG00000011876	prdm12b	100	80.110	ENSGAGG00000014083	PRDM12	99	80.110	Gopherus_agassizii
ENSACLG00000011876	prdm12b	92	81.548	ENSGGOG00000010568	PRDM12	99	77.174	Gorilla_gorilla
ENSACLG00000011876	prdm12b	100	93.011	ENSHBUG00000022878	prdm12b	100	93.011	Haplochromis_burtoni
ENSACLG00000011876	prdm12b	100	75.127	ENSHBUG00000022537	-	93	76.396	Haplochromis_burtoni
ENSACLG00000011876	prdm12b	92	81.845	ENSHGLG00000013939	PRDM12	99	77.384	Heterocephalus_glaber_female
ENSACLG00000011876	prdm12b	100	76.111	ENSHCOG00000021167	-	100	76.111	Hippocampus_comes
ENSACLG00000011876	prdm12b	90	84.058	ENSHCOG00000003663	prdm12b	100	78.987	Hippocampus_comes
ENSACLG00000011876	prdm12b	100	78.962	ENSIPUG00000019544	PRDM12	100	78.962	Ictalurus_punctatus
ENSACLG00000011876	prdm12b	100	82.703	ENSIPUG00000017053	prdm12b	100	82.703	Ictalurus_punctatus
ENSACLG00000011876	prdm12b	99	78.611	ENSSTOG00000005986	PRDM12	93	78.611	Ictidomys_tridecemlineatus
ENSACLG00000011876	prdm12b	91	83.082	ENSJJAG00000005424	Prdm12	99	83.082	Jaculus_jaculus
ENSACLG00000011876	prdm12b	94	82.059	ENSKMAG00000021205	-	94	81.395	Kryptolebias_marmoratus
ENSACLG00000011876	prdm12b	100	79.557	ENSKMAG00000016921	prdm12b	100	80.296	Kryptolebias_marmoratus
ENSACLG00000011876	prdm12b	100	86.316	ENSLBEG00000017769	prdm12b	100	86.316	Labrus_bergylta
ENSACLG00000011876	prdm12b	100	76.702	ENSLBEG00000007776	-	100	77.487	Labrus_bergylta
ENSACLG00000011876	prdm12b	100	79.614	ENSLACG00000017560	PRDM12	99	79.614	Latimeria_chalumnae
ENSACLG00000011876	prdm12b	100	84.384	ENSLOCG00000005429	prdm12b	99	84.384	Lepisosteus_oculatus
ENSACLG00000011876	prdm12b	92	80.994	ENSLAFG00000006979	PRDM12	92	80.172	Loxodonta_africana
ENSACLG00000011876	prdm12b	100	76.694	ENSMFAG00000040322	PRDM12	99	77.236	Macaca_fascicularis
ENSACLG00000011876	prdm12b	92	82.143	ENSMNEG00000037234	PRDM12	99	77.929	Macaca_nemestrina
ENSACLG00000011876	prdm12b	100	87.798	ENSMAMG00000013212	prdm12b	100	87.798	Mastacembelus_armatus
ENSACLG00000011876	prdm12b	100	77.546	ENSMAMG00000018988	-	100	77.807	Mastacembelus_armatus
ENSACLG00000011876	prdm12b	100	74.747	ENSMZEG00005000415	PRDM12	100	75.758	Maylandia_zebra
ENSACLG00000011876	prdm12b	98	80.618	ENSMGAG00000005438	PRDM12	98	80.618	Meleagris_gallopavo
ENSACLG00000011876	prdm12b	100	77.929	ENSMAUG00000013040	Prdm12	99	77.929	Mesocricetus_auratus
ENSACLG00000011876	prdm12b	93	81.765	ENSMICG00000015480	PRDM12	99	78.297	Microcebus_murinus
ENSACLG00000011876	prdm12b	100	78.512	ENSMOCG00000021026	Prdm12	93	81.871	Microtus_ochrogaster
ENSACLG00000011876	prdm12b	100	80.165	ENSMODG00000012108	PRDM12	99	80.165	Monodelphis_domestica
ENSACLG00000011876	prdm12b	100	73.458	ENSMALG00000021901	prdm12b	99	73.458	Monopterus_albus
ENSACLG00000011876	prdm12b	92	82.143	MGP_CAROLIEiJ_G0023414	Prdm12	99	77.929	Mus_caroli
ENSACLG00000011876	prdm12b	92	82.143	ENSMUSG00000079466	Prdm12	99	77.929	Mus_musculus
ENSACLG00000011876	prdm12b	92	82.143	MGP_PahariEiJ_G0024871	Prdm12	99	77.929	Mus_pahari
ENSACLG00000011876	prdm12b	92	82.143	MGP_SPRETEiJ_G0024331	Prdm12	99	77.929	Mus_spretus
ENSACLG00000011876	prdm12b	90	83.792	ENSNGAG00000018480	Prdm12	99	78.237	Nannospalax_galili
ENSACLG00000011876	prdm12b	100	92.000	ENSNBRG00000006727	prdm12b	100	92.000	Neolamprologus_brichardi
ENSACLG00000011876	prdm12b	100	74.124	ENSNBRG00000024312	-	100	74.663	Neolamprologus_brichardi
ENSACLG00000011876	prdm12b	100	72.452	ENSMEUG00000003828	PRDM12	99	72.452	Notamacropus_eugenii
ENSACLG00000011876	prdm12b	91	83.082	ENSOPRG00000008680	PRDM12	99	83.082	Ochotona_princeps
ENSACLG00000011876	prdm12b	94	80.994	ENSODEG00000016282	PRDM12	64	80.994	Octodon_degus
ENSACLG00000011876	prdm12b	61	78.667	ENSOANG00000001043	PRDM12	100	78.667	Ornithorhynchus_anatinus
ENSACLG00000011876	prdm12b	83	82.450	ENSOCUG00000008241	PRDM12	96	82.450	Oryctolagus_cuniculus
ENSACLG00000011876	prdm12b	100	74.872	ENSORLG00000017558	-	100	75.897	Oryzias_latipes
ENSACLG00000011876	prdm12b	100	84.960	ENSORLG00000007114	prdm12b	99	84.960	Oryzias_latipes
ENSACLG00000011876	prdm12b	100	83.727	ENSORLG00020019565	prdm12b	99	84.777	Oryzias_latipes_hni
ENSACLG00000011876	prdm12b	100	74.936	ENSORLG00020013167	-	100	75.703	Oryzias_latipes_hni
ENSACLG00000011876	prdm12b	100	85.450	ENSORLG00015007621	prdm12b	99	85.714	Oryzias_latipes_hsok
ENSACLG00000011876	prdm12b	100	74.615	ENSORLG00015003435	-	100	75.641	Oryzias_latipes_hsok
ENSACLG00000011876	prdm12b	100	76.240	ENSOMEG00000007762	-	100	75.718	Oryzias_melastigma
ENSACLG00000011876	prdm12b	100	85.602	ENSOMEG00000004134	prdm12b	99	85.602	Oryzias_melastigma
ENSACLG00000011876	prdm12b	92	82.635	ENSOGAG00000007557	PRDM12	99	82.635	Otolemur_garnettii
ENSACLG00000011876	prdm12b	79	81.315	ENSPPAG00000031506	-	97	81.315	Pan_paniscus
ENSACLG00000011876	prdm12b	100	72.176	ENSPPRG00000023024	PRDM12	92	72.176	Panthera_pardus
ENSACLG00000011876	prdm12b	92	81.845	ENSPTRG00000043324	-	99	77.446	Pan_troglodytes
ENSACLG00000011876	prdm12b	92	81.845	ENSPTRG00000021475	PRDM12	99	77.446	Pan_troglodytes
ENSACLG00000011876	prdm12b	92	82.143	ENSPANG00000025967	PRDM12	99	77.929	Papio_anubis
ENSACLG00000011876	prdm12b	100	81.818	ENSPKIG00000007228	prdm12b	100	81.818	Paramormyrops_kingsleyae
ENSACLG00000011876	prdm12b	90	80.303	ENSPKIG00000004305	PRDM12	94	80.303	Paramormyrops_kingsleyae
ENSACLG00000011876	prdm12b	100	80.110	ENSPSIG00000006739	PRDM12	99	80.110	Pelodiscus_sinensis
ENSACLG00000011876	prdm12b	100	87.500	ENSPMGG00000008867	prdm12b	99	87.500	Periophthalmus_magnuspinnatus
ENSACLG00000011876	prdm12b	100	77.513	ENSPMGG00000002356	-	100	77.285	Periophthalmus_magnuspinnatus
ENSACLG00000011876	prdm12b	92	82.635	ENSPEMG00000009969	Prdm12	91	82.635	Peromyscus_maniculatus_bairdii
ENSACLG00000011876	prdm12b	100	80.165	ENSPCIG00000024119	PRDM12	99	80.165	Phascolarctos_cinereus
ENSACLG00000011876	prdm12b	100	86.631	ENSPFOG00000019841	prdm12b	100	86.631	Poecilia_formosa
ENSACLG00000011876	prdm12b	100	84.697	ENSPLAG00000016626	prdm12b	99	86.280	Poecilia_latipinna
ENSACLG00000011876	prdm12b	96	84.932	ENSPMEG00000016698	prdm12b	99	86.027	Poecilia_mexicana
ENSACLG00000011876	prdm12b	100	84.737	ENSPREG00000015073	prdm12b	99	86.053	Poecilia_reticulata
ENSACLG00000011876	prdm12b	95	78.947	ENSPREG00000003211	-	94	78.947	Poecilia_reticulata
ENSACLG00000011876	prdm12b	96	80.460	ENSPPYG00000019694	PRDM12	98	80.460	Pongo_abelii
ENSACLG00000011876	prdm12b	92	82.440	ENSPCOG00000022255	PRDM12	99	77.989	Propithecus_coquereli
ENSACLG00000011876	prdm12b	92	82.143	ENSPVAG00000001511	PRDM12	99	77.717	Pteropus_vampyrus
ENSACLG00000011876	prdm12b	100	92.246	ENSPNYG00000009607	prdm12b	100	92.246	Pundamilia_nyererei
ENSACLG00000011876	prdm12b	100	74.747	ENSPNYG00000013589	-	100	75.758	Pundamilia_nyererei
ENSACLG00000011876	prdm12b	100	83.243	ENSPNAG00000024532	prdm12b	100	83.514	Pygocentrus_nattereri
ENSACLG00000011876	prdm12b	100	83.657	ENSPNAG00000013396	PRDM12	100	83.380	Pygocentrus_nattereri
ENSACLG00000011876	prdm12b	92	82.143	ENSRNOG00000009218	Prdm12	99	77.929	Rattus_norvegicus
ENSACLG00000011876	prdm12b	88	83.386	ENSRBIG00000042712	PRDM12	98	77.437	Rhinopithecus_bieti
ENSACLG00000011876	prdm12b	89	83.591	ENSRROG00000043554	PRDM12	99	83.591	Rhinopithecus_roxellana
ENSACLG00000011876	prdm12b	100	79.670	ENSSHAG00000015972	PRDM12	99	79.670	Sarcophilus_harrisii
ENSACLG00000011876	prdm12b	100	84.062	ENSSMAG00000003754	prdm12b	100	84.319	Scophthalmus_maximus
ENSACLG00000011876	prdm12b	100	76.943	ENSSDUG00000019071	-	100	77.979	Seriola_dumerili
ENSACLG00000011876	prdm12b	100	87.402	ENSSDUG00000023498	prdm12b	100	87.402	Seriola_dumerili
ENSACLG00000011876	prdm12b	100	80.000	ENSSLDG00000013562	-	100	80.000	Seriola_lalandi_dorsalis
ENSACLG00000011876	prdm12b	100	87.402	ENSSLDG00000009557	prdm12b	100	87.402	Seriola_lalandi_dorsalis
ENSACLG00000011876	prdm12b	100	80.663	ENSSPUG00000013424	PRDM12	99	80.663	Sphenodon_punctatus
ENSACLG00000011876	prdm12b	100	73.352	ENSSPAG00000022420	-	100	74.725	Stegastes_partitus
ENSACLG00000011876	prdm12b	100	87.302	ENSSPAG00000018824	prdm12b	100	88.095	Stegastes_partitus
ENSACLG00000011876	prdm12b	92	82.440	ENSSSCG00000005703	PRDM12	99	78.202	Sus_scrofa
ENSACLG00000011876	prdm12b	100	76.694	ENSTRUG00000013239	-	100	76.694	Takifugu_rubripes
ENSACLG00000011876	prdm12b	100	87.228	ENSTRUG00000018659	prdm12b	100	87.228	Takifugu_rubripes
ENSACLG00000011876	prdm12b	100	79.272	ENSTNIG00000005859	-	99	79.272	Tetraodon_nigroviridis
ENSACLG00000011876	prdm12b	100	86.413	ENSTNIG00000009020	prdm12b	99	86.413	Tetraodon_nigroviridis
ENSACLG00000011876	prdm12b	92	82.440	ENSUAMG00000009653	PRDM12	94	81.287	Ursus_americanus
ENSACLG00000011876	prdm12b	92	82.635	ENSVVUG00000027662	PRDM12	79	82.635	Vulpes_vulpes
ENSACLG00000011876	prdm12b	100	86.364	ENSXCOG00000002836	prdm12b	99	87.701	Xiphophorus_couchianus
ENSACLG00000011876	prdm12b	100	77.105	ENSXMAG00000028012	-	100	77.285	Xiphophorus_maculatus
ENSACLG00000011876	prdm12b	100	85.942	ENSXMAG00000005537	prdm12b	100	87.268	Xiphophorus_maculatus