EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011948 (Gene tree)
Gene ID: 113011571
Gene Symbol: larp1b
Alias: fc76b04|wu:fc76b04
Full Name: la-related protein 1B-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 26932 bases
Position: chr19:2950466-2977397
Accession: 113011571
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000017483	La	PF05383.17	6.4e-21	1	1
ENSACLP00000017505	La	PF05383.17	6.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000017923	-	7269	-	ENSACLP00000017505	1084 (aa)	-	-
ENSACLT00000017901	-	7532	XM_026151104	ENSACLP00000017483	1084 (aa)	XP_026006889	-

Gene Model

Click here to download ENSACLG00000011948's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011948's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011948	larp1b	90	53.191	ENSACLG00000015256	larp1	95	53.119

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011948	larp1b	87	55.410	ENSG00000138709	LARP1B	96	56.460	Homo_sapiens
ENSACLG00000011948	larp1b	100	81.404	ENSAPOG00000020101	larp1b	100	81.404	Acanthochromis_polyacanthus
ENSACLG00000011948	larp1b	53	52.414	ENSAMEG00000002748	LARP1B	99	52.069	Ailuropoda_melanoleuca
ENSACLG00000011948	larp1b	100	81.553	ENSACIG00000023890	larp1b	100	81.553	Amphilophus_citrinellus
ENSACLG00000011948	larp1b	90	72.497	ENSAOCG00000014268	larp1b	99	72.700	Amphiprion_ocellaris
ENSACLG00000011948	larp1b	100	82.126	ENSAPEG00000004126	larp1b	100	81.943	Amphiprion_percula
ENSACLG00000011948	larp1b	100	83.318	ENSATEG00000017849	larp1b	100	82.951	Anabas_testudineus
ENSACLG00000011948	larp1b	82	55.209	ENSAPLG00000010129	LARP1B	99	54.731	Anas_platyrhynchos
ENSACLG00000011948	larp1b	84	55.799	ENSACAG00000011338	LARP1B	93	56.799	Anolis_carolinensis
ENSACLG00000011948	larp1b	61	53.343	ENSANAG00000034618	LARP1B	83	53.201	Aotus_nancymaae
ENSACLG00000011948	larp1b	89	60.949	ENSAMXG00000006805	larp1b	88	57.115	Astyanax_mexicanus
ENSACLG00000011948	larp1b	87	55.979	ENSBTAG00000012135	LARP1B	95	51.119	Bos_taurus
ENSACLG00000011948	larp1b	83	55.484	ENSCJAG00000003338	LARP1B	99	57.110	Callithrix_jacchus
ENSACLG00000011948	larp1b	85	55.916	ENSCAFG00000003831	LARP1B	100	54.576	Canis_familiaris
ENSACLG00000011948	larp1b	85	55.799	ENSCAFG00020018899	LARP1B	95	57.473	Canis_lupus_dingo
ENSACLG00000011948	larp1b	85	54.236	ENSCHIG00000023144	LARP1B	95	56.393	Capra_hircus
ENSACLG00000011948	larp1b	84	55.238	ENSCCAG00000021948	LARP1B	97	56.196	Cebus_capucinus
ENSACLG00000011948	larp1b	82	55.544	ENSCATG00000013541	LARP1B	96	55.604	Cercocebus_atys
ENSACLG00000011948	larp1b	82	56.760	ENSCSAG00000003582	LARP1B	97	56.833	Chlorocebus_sabaeus
ENSACLG00000011948	larp1b	69	58.003	ENSCHOG00000005354	LARP1B	83	58.106	Choloepus_hoffmanni
ENSACLG00000011948	larp1b	91	54.439	ENSCPBG00000017480	LARP1B	91	55.110	Chrysemys_picta_bellii
ENSACLG00000011948	larp1b	82	54.225	ENSCANG00000026958	LARP1B	96	52.935	Colobus_angolensis_palliatus
ENSACLG00000011948	larp1b	100	74.505	ENSCSEG00000013519	larp1b	100	74.955	Cynoglossus_semilaevis
ENSACLG00000011948	larp1b	100	77.057	ENSCVAG00000005046	larp1b	100	76.874	Cyprinodon_variegatus
ENSACLG00000011948	larp1b	86	67.339	ENSDARG00000061169	larp1b	85	62.602	Danio_rerio
ENSACLG00000011948	larp1b	74	53.228	ENSETEG00000012497	LARP1B	85	54.247	Echinops_telfairi
ENSACLG00000011948	larp1b	88	46.848	ENSEBUG00000003668	larp1b	95	45.684	Eptatretus_burgeri
ENSACLG00000011948	larp1b	85	55.219	ENSEASG00005018106	LARP1B	99	55.652	Equus_asinus_asinus
ENSACLG00000011948	larp1b	90	54.790	ENSECAG00000001088	LARP1B	84	56.050	Equus_caballus
ENSACLG00000011948	larp1b	74	62.833	ENSELUG00000023774	larp1b	95	62.973	Esox_lucius
ENSACLG00000011948	larp1b	84	53.967	ENSFALG00000008098	LARP1B	96	54.585	Ficedula_albicollis
ENSACLG00000011948	larp1b	100	79.178	ENSFHEG00000010264	larp1b	97	78.721	Fundulus_heteroclitus
ENSACLG00000011948	larp1b	88	69.408	ENSGMOG00000005207	larp1b	85	75.277	Gadus_morhua
ENSACLG00000011948	larp1b	86	54.564	ENSGALG00000010207	LARP1B	91	54.341	Gallus_gallus
ENSACLG00000011948	larp1b	85	79.947	ENSGAFG00000012012	larp1b	100	79.751	Gambusia_affinis
ENSACLG00000011948	larp1b	100	68.519	ENSGACG00000004609	larp1b	100	69.373	Gasterosteus_aculeatus
ENSACLG00000011948	larp1b	91	54.350	ENSGAGG00000017209	LARP1B	89	56.078	Gopherus_agassizii
ENSACLG00000011948	larp1b	82	56.498	ENSGGOG00000015900	LARP1B	96	56.352	Gorilla_gorilla
ENSACLG00000011948	larp1b	100	99.173	ENSHBUG00000009730	larp1b	100	99.173	Haplochromis_burtoni
ENSACLG00000011948	larp1b	62	81.065	ENSHCOG00000000918	larp1b	95	81.073	Hippocampus_comes
ENSACLG00000011948	larp1b	72	65.796	ENSIPUG00000012138	larp1b	86	61.015	Ictalurus_punctatus
ENSACLG00000011948	larp1b	99	75.626	ENSKMAG00000011589	larp1b	100	74.421	Kryptolebias_marmoratus
ENSACLG00000011948	larp1b	100	79.854	ENSLBEG00000005655	larp1b	100	80.219	Labrus_bergylta
ENSACLG00000011948	larp1b	95	57.129	ENSLACG00000015247	LARP1B	90	58.611	Latimeria_chalumnae
ENSACLG00000011948	larp1b	89	59.144	ENSLOCG00000010684	larp1b	99	57.782	Lepisosteus_oculatus
ENSACLG00000011948	larp1b	82	56.405	ENSMFAG00000002218	LARP1B	96	56.474	Macaca_fascicularis
ENSACLG00000011948	larp1b	82	56.405	ENSMMUG00000021347	LARP1B	96	56.474	Macaca_mulatta
ENSACLG00000011948	larp1b	75	60.197	ENSMNEG00000030406	LARP1B	96	60.200	Macaca_nemestrina
ENSACLG00000011948	larp1b	82	54.946	ENSMLEG00000009306	LARP1B	96	55.060	Mandrillus_leucophaeus
ENSACLG00000011948	larp1b	99	82.304	ENSMAMG00000000081	larp1b	99	82.028	Mastacembelus_armatus
ENSACLG00000011948	larp1b	72	96.543	ENSMZEG00005002545	larp1b	100	96.543	Maylandia_zebra
ENSACLG00000011948	larp1b	81	50.374	ENSMGAG00000004809	LARP1B	99	50.593	Meleagris_gallopavo
ENSACLG00000011948	larp1b	82	58.061	ENSMICG00000036111	LARP1B	96	57.930	Microcebus_murinus
ENSACLG00000011948	larp1b	90	54.269	ENSMODG00000012300	LARP1B	89	54.207	Monodelphis_domestica
ENSACLG00000011948	larp1b	100	81.084	ENSMALG00000003638	larp1b	100	80.900	Monopterus_albus
ENSACLG00000011948	larp1b	87	55.975	ENSMPUG00000017365	LARP1B	85	55.691	Mustela_putorius_furo
ENSACLG00000011948	larp1b	83	54.603	ENSMLUG00000010229	LARP1B	99	54.507	Myotis_lucifugus
ENSACLG00000011948	larp1b	87	96.951	ENSNBRG00000023846	larp1b	100	96.951	Neolamprologus_brichardi
ENSACLG00000011948	larp1b	82	56.223	ENSNLEG00000013819	LARP1B	97	56.291	Nomascus_leucogenys
ENSACLG00000011948	larp1b	60	58.824	ENSMEUG00000010308	LARP1B	85	59.016	Notamacropus_eugenii
ENSACLG00000011948	larp1b	75	50.175	ENSOPRG00000005478	LARP1B	88	51.146	Ochotona_princeps
ENSACLG00000011948	larp1b	87	92.952	ENSONIG00000012386	larp1b	100	92.952	Oreochromis_niloticus
ENSACLG00000011948	larp1b	85	53.870	ENSOCUG00000013330	LARP1B	95	55.617	Oryctolagus_cuniculus
ENSACLG00000011948	larp1b	97	75.658	ENSORLG00000017954	larp1b	100	74.680	Oryzias_latipes
ENSACLG00000011948	larp1b	100	74.954	ENSORLG00020013081	larp1b	100	74.680	Oryzias_latipes_hni
ENSACLG00000011948	larp1b	100	75.046	ENSORLG00015009580	larp1b	100	74.771	Oryzias_latipes_hsok
ENSACLG00000011948	larp1b	100	77.544	ENSOMEG00000004210	larp1b	100	77.594	Oryzias_melastigma
ENSACLG00000011948	larp1b	82	57.220	ENSOGAG00000005771	LARP1B	100	57.563	Otolemur_garnettii
ENSACLG00000011948	larp1b	82	55.867	ENSOARG00000015300	LARP1B	96	56.209	Ovis_aries
ENSACLG00000011948	larp1b	82	56.713	ENSPPAG00000030439	LARP1B	96	56.304	Pan_paniscus
ENSACLG00000011948	larp1b	82	56.498	ENSPTRG00000016437	LARP1B	96	56.087	Pan_troglodytes
ENSACLG00000011948	larp1b	82	56.620	ENSPANG00000012488	LARP1B	96	56.692	Papio_anubis
ENSACLG00000011948	larp1b	80	58.919	ENSPKIG00000014360	larp1b	93	51.071	Paramormyrops_kingsleyae
ENSACLG00000011948	larp1b	86	57.202	ENSPSIG00000012885	LARP1B	99	57.099	Pelodiscus_sinensis
ENSACLG00000011948	larp1b	73	72.340	ENSPMGG00000007207	larp1b	95	71.679	Periophthalmus_magnuspinnatus
ENSACLG00000011948	larp1b	59	54.885	ENSPMAG00000002700	larp1b	96	49.380	Petromyzon_marinus
ENSACLG00000011948	larp1b	86	55.828	ENSPCIG00000026516	LARP1B	93	62.745	Phascolarctos_cinereus
ENSACLG00000011948	larp1b	100	77.827	ENSPFOG00000019519	larp1b	100	77.916	Poecilia_formosa
ENSACLG00000011948	larp1b	63	77.810	ENSPFOG00000022837	-	99	77.954	Poecilia_formosa
ENSACLG00000011948	larp1b	100	79.927	ENSPLAG00000007115	larp1b	100	79.745	Poecilia_latipinna
ENSACLG00000011948	larp1b	100	79.326	ENSPMEG00000001224	larp1b	100	79.144	Poecilia_mexicana
ENSACLG00000011948	larp1b	84	54.114	ENSPCAG00000007546	LARP1B	96	54.783	Procavia_capensis
ENSACLG00000011948	larp1b	82	45.874	ENSPCOG00000021874	LARP1B	96	62.500	Propithecus_coquereli
ENSACLG00000011948	larp1b	82	52.236	ENSPVAG00000005373	LARP1B	96	52.539	Pteropus_vampyrus
ENSACLG00000011948	larp1b	72	95.208	ENSPNYG00000017357	larp1b	100	95.208	Pundamilia_nyererei
ENSACLG00000011948	larp1b	86	65.025	ENSPNAG00000008823	larp1b	89	58.571	Pygocentrus_nattereri
ENSACLG00000011948	larp1b	82	56.405	ENSRROG00000030771	LARP1B	96	56.474	Rhinopithecus_roxellana
ENSACLG00000011948	larp1b	61	51.983	ENSSHAG00000014474	LARP1B	99	51.709	Sarcophilus_harrisii
ENSACLG00000011948	larp1b	84	85.449	ENSSMAG00000006347	larp1b	97	83.195	Scophthalmus_maximus
ENSACLG00000011948	larp1b	100	83.196	ENSSDUG00000004182	larp1b	100	83.836	Seriola_dumerili
ENSACLG00000011948	larp1b	89	79.019	ENSSLDG00000014613	larp1b	99	77.975	Seriola_lalandi_dorsalis
ENSACLG00000011948	larp1b	81	56.138	ENSSPUG00000011837	LARP1B	94	56.690	Sphenodon_punctatus
ENSACLG00000011948	larp1b	100	81.545	ENSSPAG00000017772	larp1b	100	81.653	Stegastes_partitus
ENSACLG00000011948	larp1b	90	53.673	ENSSSCG00000034280	LARP1B	98	76.667	Sus_scrofa
ENSACLG00000011948	larp1b	69	60.105	ENSTGUG00000002098	-	80	62.629	Taeniopygia_guttata
ENSACLG00000011948	larp1b	99	73.665	ENSTRUG00000005612	larp1b	99	75.349	Takifugu_rubripes
ENSACLG00000011948	larp1b	87	74.174	ENSTNIG00000012398	larp1b	100	72.545	Tetraodon_nigroviridis
ENSACLG00000011948	larp1b	66	59.375	ENSTBEG00000004177	LARP1B	76	59.016	Tupaia_belangeri
ENSACLG00000011948	larp1b	74	56.647	ENSTTRG00000012984	LARP1B	88	56.454	Tursiops_truncatus
ENSACLG00000011948	larp1b	85	55.916	ENSUMAG00000007373	LARP1B	95	57.379	Ursus_maritimus
ENSACLG00000011948	larp1b	82	47.784	ENSVPAG00000007223	LARP1B	91	72.050	Vicugna_pacos
ENSACLG00000011948	larp1b	85	55.983	ENSVVUG00000011307	LARP1B	99	56.464	Vulpes_vulpes
ENSACLG00000011948	larp1b	90	50.810	ENSXETG00000022512	larp1b	93	51.129	Xenopus_tropicalis
ENSACLG00000011948	larp1b	86	73.990	ENSXCOG00000004435	larp1b	99	73.359	Xiphophorus_couchianus
ENSACLG00000011948	larp1b	100	79.636	ENSXMAG00000008150	larp1b	100	79.455	Xiphophorus_maculatus