EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000011955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 846 bases
Position: chr20:2581194-2582039
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000017493	FDF	PF09532.10	2.1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000017910	-	846	-	ENSACLP00000017493	281 (aa)	-	-

Gene Model

Click here to download ENSACLG00000011955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000011955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000011955	-	100	97.213	ENSACLG00000019624	-	100	97.213
ENSACLG00000011955	-	60	93.678	ENSACLG00000013004	-	62	93.678
ENSACLG00000011955	-	64	87.435	ENSACLG00000027552	-	66	87.435
ENSACLG00000011955	-	100	85.366	ENSACLG00000008384	-	99	88.502

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000011955	-	66	38.384	ENSAPOG00000001780	lsm14b	52	41.148	Acanthochromis_polyacanthus
ENSACLG00000011955	-	79	46.888	ENSACIG00000003147	LSM14B	90	48.780	Amphilophus_citrinellus
ENSACLG00000011955	-	66	38.384	ENSAOCG00000012380	lsm14b	52	40.670	Amphiprion_ocellaris
ENSACLG00000011955	-	80	53.586	ENSAOCG00000006667	LSM14B	59	53.586	Amphiprion_ocellaris
ENSACLG00000011955	-	66	41.969	ENSATEG00000016603	lsm14b	52	43.627	Anabas_testudineus
ENSACLG00000011955	-	76	38.793	ENSBTAG00000021558	LSM14B	54	39.683	Bos_taurus
ENSACLG00000011955	-	84	37.066	ENSTSYG00000031914	LSM14B	66	37.762	Carlito_syrichta
ENSACLG00000011955	-	77	38.235	ENSCAPG00000013059	LSM14B	53	46.988	Cavia_aperea
ENSACLG00000011955	-	77	38.655	ENSCPOG00000038080	LSM14B	53	47.590	Cavia_porcellus
ENSACLG00000011955	-	77	38.655	ENSCLAG00000003186	LSM14B	51	50.000	Chinchilla_lanigera
ENSACLG00000011955	-	70	50.711	ENSCSEG00000020669	LSM14B	54	49.296	Cynoglossus_semilaevis
ENSACLG00000011955	-	70	34.975	ENSETEG00000011188	-	50	47.826	Echinops_telfairi
ENSACLG00000011955	-	70	44.601	ENSELUG00000005780	lsm14b	53	43.662	Esox_lucius
ENSACLG00000011955	-	77	37.815	ENSFDAG00000002214	LSM14B	53	47.590	Fukomys_damarensis
ENSACLG00000011955	-	67	36.893	ENSFHEG00000006237	lsm14b	53	36.916	Fundulus_heteroclitus
ENSACLG00000011955	-	54	55.625	ENSGAFG00000013723	LSM14B	74	55.625	Gambusia_affinis
ENSACLG00000011955	-	76	39.655	ENSGAGG00000004106	LSM14B	63	48.148	Gopherus_agassizii
ENSACLG00000011955	-	84	35.907	ENSGGOG00000005630	LSM14B	53	47.590	Gorilla_gorilla
ENSACLG00000011955	-	79	37.190	ENSHGLG00000015055	LSM14B	53	47.590	Heterocephalus_glaber_female
ENSACLG00000011955	-	79	37.190	ENSHGLG00100015273	LSM14B	54	47.590	Heterocephalus_glaber_male
ENSACLG00000011955	-	79	46.809	ENSHCOG00000018747	LSM14B	59	48.485	Hippocampus_comes
ENSACLG00000011955	-	77	37.815	ENSSTOG00000020482	LSM14B	53	47.590	Ictidomys_tridecemlineatus
ENSACLG00000011955	-	77	38.197	ENSJJAG00000012728	Lsm14b	53	48.193	Jaculus_jaculus
ENSACLG00000011955	-	68	55.779	ENSKMAG00000012834	-	90	56.585	Kryptolebias_marmoratus
ENSACLG00000011955	-	66	37.313	ENSMAMG00000020539	lsm14b	53	38.756	Mastacembelus_armatus
ENSACLG00000011955	-	80	51.293	ENSMAMG00000024124	LSM14B	58	51.293	Mastacembelus_armatus
ENSACLG00000011955	-	100	88.153	ENSMZEG00005002688	-	100	88.502	Maylandia_zebra
ENSACLG00000011955	-	68	82.039	ENSMZEG00005026001	LSM14B	59	80.455	Maylandia_zebra
ENSACLG00000011955	-	59	94.152	ENSMZEG00005009676	-	59	94.152	Maylandia_zebra
ENSACLG00000011955	-	100	88.502	ENSMZEG00005026087	-	100	88.850	Maylandia_zebra
ENSACLG00000011955	-	77	38.462	ENSMAUG00000020700	Lsm14b	53	48.193	Mesocricetus_auratus
ENSACLG00000011955	-	85	36.923	ENSMICG00000014675	LSM14B	58	37.979	Microcebus_murinus
ENSACLG00000011955	-	59	41.989	ENSMOCG00000020600	Lsm14b	53	47.590	Microtus_ochrogaster
ENSACLG00000011955	-	70	37.561	ENSMALG00000004783	lsm14b	50	39.409	Monopterus_albus
ENSACLG00000011955	-	68	57.711	ENSMALG00000022251	LSM14B	53	58.049	Monopterus_albus
ENSACLG00000011955	-	77	37.607	ENSMUSG00000039108	Lsm14b	53	47.590	Mus_musculus
ENSACLG00000011955	-	77	38.235	ENSODEG00000004099	LSM14B	53	47.590	Octodon_degus
ENSACLG00000011955	-	83	46.748	ENSORLG00000028353	LSM14B	66	45.882	Oryzias_latipes
ENSACLG00000011955	-	83	47.154	ENSORLG00015013157	LSM14B	66	46.275	Oryzias_latipes_hsok
ENSACLG00000011955	-	77	39.419	ENSOGAG00000003915	LSM14B	55	40.152	Otolemur_garnettii
ENSACLG00000011955	-	56	43.429	ENSPSIG00000014762	LSM14B	63	44.103	Pelodiscus_sinensis
ENSACLG00000011955	-	70	38.725	ENSPFOG00000005631	lsm14b	53	34.703	Poecilia_formosa
ENSACLG00000011955	-	70	38.235	ENSPLAG00000002449	lsm14b	52	34.597	Poecilia_latipinna
ENSACLG00000011955	-	82	45.833	ENSPLAG00000005793	LSM14B	66	45.635	Poecilia_latipinna
ENSACLG00000011955	-	64	54.098	ENSPMEG00000022953	LSM14B	53	52.683	Poecilia_mexicana
ENSACLG00000011955	-	67	37.563	ENSPMEG00000000745	lsm14b	54	38.863	Poecilia_mexicana
ENSACLG00000011955	-	73	48.611	ENSPREG00000007828	LSM14B	74	48.636	Poecilia_reticulata
ENSACLG00000011955	-	84	36.293	ENSRROG00000042949	LSM14B	53	48.193	Rhinopithecus_roxellana
ENSACLG00000011955	-	85	35.000	ENSSBOG00000032820	LSM14B	51	48.193	Saimiri_boliviensis_boliviensis
ENSACLG00000011955	-	66	37.113	ENSSMAG00000012725	lsm14b	52	40.887	Scophthalmus_maximus
ENSACLG00000011955	-	68	60.396	ENSSDUG00000022770	LSM14B	55	60.870	Seriola_dumerili
ENSACLG00000011955	-	81	48.718	ENSSLDG00000011354	-	81	51.029	Seriola_lalandi_dorsalis
ENSACLG00000011955	-	83	40.964	ENSSPAG00000018854	-	82	40.161	Stegastes_partitus
ENSACLG00000011955	-	52	38.418	ENSSSCG00000026052	LSM14B	54	46.988	Sus_scrofa
ENSACLG00000011955	-	57	43.182	ENSTGUG00000007884	LSM14B	55	43.590	Taeniopygia_guttata
ENSACLG00000011955	-	74	38.249	ENSTRUG00000011354	lsm14b	55	37.788	Takifugu_rubripes
ENSACLG00000011955	-	68	53.769	ENSTRUG00000001529	LSM14B	53	55.392	Takifugu_rubripes
ENSACLG00000011955	-	77	37.339	ENSVVUG00000015920	LSM14B	55	47.904	Vulpes_vulpes
ENSACLG00000011955	-	66	35.714	ENSXMAG00000010013	lsm14b	54	38.785	Xiphophorus_maculatus