EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000012239 (Gene tree)
Gene ID: 113021785
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC113021785
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 8474 bases
Position: chr5:235493-243966
Accession: 113021785
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000017884	RVT_1	PF00078.27	2.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000018311	-	7668	-	ENSACLP00000017884	1868 (aa)	XP_026022288	UPI000E427A0C

Gene Model

Click here to download ENSACLG00000012239's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000012239's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000012239	-	56	32.085	ENSACLG00000003748	-	62	32.085
ENSACLG00000012239	-	59	41.491	ENSACLG00000003852	-	73	41.491
ENSACLG00000012239	-	55	33.643	ENSACLG00000020048	-	80	30.172
ENSACLG00000012239	-	61	31.884	ENSACLG00000016624	-	79	31.884
ENSACLG00000012239	-	53	39.085	ENSACLG00000027747	-	69	39.085
ENSACLG00000012239	-	53	33.452	ENSACLG00000018344	-	85	33.452
ENSACLG00000012239	-	62	30.438	ENSACLG00000013669	-	77	30.395
ENSACLG00000012239	-	54	33.685	ENSACLG00000003361	-	67	33.685
ENSACLG00000012239	-	55	33.385	ENSACLG00000001555	-	68	33.385
ENSACLG00000012239	-	54	32.218	ENSACLG00000004344	-	70	32.218
ENSACLG00000012239	-	99	99.785	ENSACLG00000015360	-	99	99.785
ENSACLG00000012239	-	59	33.028	ENSACLG00000008224	-	82	33.028
ENSACLG00000012239	-	62	36.090	ENSACLG00000015880	-	91	36.090
ENSACLG00000012239	-	57	34.215	ENSACLG00000000384	-	62	34.215
ENSACLG00000012239	-	54	33.589	ENSACLG00000013455	-	67	33.589
ENSACLG00000012239	-	61	31.722	ENSACLG00000009118	-	78	31.722
ENSACLG00000012239	-	55	33.116	ENSACLG00000002182	-	78	33.116
ENSACLG00000012239	-	55	33.116	ENSACLG00000019658	-	78	33.116
ENSACLG00000012239	-	54	34.887	ENSACLG00000002176	-	50	34.887
ENSACLG00000012239	-	61	30.058	ENSACLG00000021770	-	78	30.058
ENSACLG00000012239	-	62	30.132	ENSACLG00000021546	-	77	30.215
ENSACLG00000012239	-	59	33.257	ENSACLG00000014671	-	82	33.257
ENSACLG00000012239	-	59	34.890	ENSACLG00000012963	-	83	30.145
ENSACLG00000012239	-	55	33.807	ENSACLG00000010542	-	76	33.807
ENSACLG00000012239	-	50	43.110	ENSACLG00000014688	-	79	43.110
ENSACLG00000012239	-	55	33.540	ENSACLG00000013171	-	71	33.540

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000012239	-	54	37.007	ENSAPOG00000011081	-	78	33.777	Acanthochromis_polyacanthus
ENSACLG00000012239	-	57	33.511	ENSAPOG00000022647	-	75	33.511	Acanthochromis_polyacanthus
ENSACLG00000012239	-	70	30.819	ENSAPOG00000005387	-	83	30.819	Acanthochromis_polyacanthus
ENSACLG00000012239	-	52	32.810	ENSAPOG00000000887	-	66	33.386	Acanthochromis_polyacanthus
ENSACLG00000012239	-	58	32.648	ENSAPEG00000002424	-	75	32.648	Amphiprion_percula
ENSACLG00000012239	-	54	32.051	ENSAPEG00000015494	-	80	32.437	Amphiprion_percula
ENSACLG00000012239	-	68	30.979	ENSAPEG00000024442	-	81	30.979	Amphiprion_percula
ENSACLG00000012239	-	54	31.962	ENSAPEG00000015779	-	70	32.437	Amphiprion_percula
ENSACLG00000012239	-	52	54.237	ENSATEG00000018698	-	85	54.237	Anabas_testudineus
ENSACLG00000012239	-	55	35.105	ENSAMXG00000043312	-	74	31.281	Astyanax_mexicanus
ENSACLG00000012239	-	51	35.736	ENSAMXG00000030479	-	64	35.736	Astyanax_mexicanus
ENSACLG00000012239	-	62	32.003	ENSAMXG00000039110	-	83	32.003	Astyanax_mexicanus
ENSACLG00000012239	-	52	34.308	ENSAMXG00000035138	-	68	34.308	Astyanax_mexicanus
ENSACLG00000012239	-	53	37.815	ENSAMXG00000037864	-	92	37.815	Astyanax_mexicanus
ENSACLG00000012239	-	52	42.274	ENSAMXG00000034382	-	86	42.274	Astyanax_mexicanus
ENSACLG00000012239	-	55	35.105	ENSAMXG00000038997	-	74	31.364	Astyanax_mexicanus
ENSACLG00000012239	-	50	33.913	ENSAMXG00000036113	-	82	33.913	Astyanax_mexicanus
ENSACLG00000012239	-	58	31.709	ENSAMXG00000044052	-	68	31.709	Astyanax_mexicanus
ENSACLG00000012239	-	53	60.843	ENSAMXG00000038033	-	99	60.843	Astyanax_mexicanus
ENSACLG00000012239	-	50	41.278	ENSAMXG00000043385	-	73	41.278	Astyanax_mexicanus
ENSACLG00000012239	-	59	34.121	ENSAMXG00000032330	-	77	34.121	Astyanax_mexicanus
ENSACLG00000012239	-	62	34.941	ENSAMXG00000033629	-	69	34.941	Astyanax_mexicanus
ENSACLG00000012239	-	55	37.156	ENSAMXG00000040885	-	81	37.156	Astyanax_mexicanus
ENSACLG00000012239	-	62	62.176	ENSAMXG00000032559	-	98	62.176	Astyanax_mexicanus
ENSACLG00000012239	-	57	34.467	ENSCVAG00000005047	-	60	34.467	Cyprinodon_variegatus
ENSACLG00000012239	-	55	35.522	ENSGAFG00000016352	-	89	33.467	Gambusia_affinis
ENSACLG00000012239	-	56	33.746	ENSGAFG00000013212	-	53	33.746	Gambusia_affinis
ENSACLG00000012239	-	64	33.083	ENSGAFG00000016760	-	83	33.208	Gambusia_affinis
ENSACLG00000012239	-	68	30.991	ENSHBUG00000021107	-	79	30.991	Haplochromis_burtoni
ENSACLG00000012239	-	58	32.984	ENSHCOG00000012267	-	96	32.984	Hippocampus_comes
ENSACLG00000012239	-	65	30.418	ENSKMAG00000012706	-	79	30.418	Kryptolebias_marmoratus
ENSACLG00000012239	-	60	37.187	ENSKMAG00000010491	-	87	37.187	Kryptolebias_marmoratus
ENSACLG00000012239	-	60	37.187	ENSKMAG00000022204	-	87	37.187	Kryptolebias_marmoratus
ENSACLG00000012239	-	60	37.187	ENSKMAG00000003018	-	87	37.187	Kryptolebias_marmoratus
ENSACLG00000012239	-	57	34.700	ENSMZEG00005012274	-	77	34.700	Maylandia_zebra
ENSACLG00000012239	-	52	31.783	ENSMZEG00005025542	-	77	31.783	Maylandia_zebra
ENSACLG00000012239	-	54	34.387	ENSMALG00000020759	-	75	34.387	Monopterus_albus
ENSACLG00000012239	-	56	44.211	ENSORLG00000022054	-	76	44.211	Oryzias_latipes
ENSACLG00000012239	-	65	31.075	ENSORLG00000022989	-	77	31.075	Oryzias_latipes
ENSACLG00000012239	-	54	33.703	ENSORLG00000029163	-	69	33.861	Oryzias_latipes
ENSACLG00000012239	-	54	34.387	ENSORLG00000028051	-	71	34.387	Oryzias_latipes
ENSACLG00000012239	-	70	34.240	ENSORLG00000029628	-	75	34.240	Oryzias_latipes
ENSACLG00000012239	-	54	32.853	ENSORLG00000023802	-	53	32.853	Oryzias_latipes
ENSACLG00000012239	-	57	33.575	ENSORLG00000024900	-	62	35.051	Oryzias_latipes
ENSACLG00000012239	-	54	35.091	ENSORLG00000022415	-	51	35.091	Oryzias_latipes
ENSACLG00000012239	-	57	33.469	ENSORLG00000029435	-	78	33.469	Oryzias_latipes
ENSACLG00000012239	-	57	33.846	ENSORLG00000029329	-	61	35.253	Oryzias_latipes
ENSACLG00000012239	-	84	58.097	ENSORLG00000028409	-	83	58.097	Oryzias_latipes
ENSACLG00000012239	-	54	33.861	ENSORLG00000027440	-	69	33.861	Oryzias_latipes
ENSACLG00000012239	-	61	30.242	ENSORLG00000028175	-	79	30.242	Oryzias_latipes
ENSACLG00000012239	-	56	44.211	ENSORLG00000029990	-	76	44.211	Oryzias_latipes
ENSACLG00000012239	-	56	33.581	ENSORLG00000024795	-	65	33.581	Oryzias_latipes
ENSACLG00000012239	-	64	31.062	ENSORLG00000028547	-	79	31.062	Oryzias_latipes
ENSACLG00000012239	-	64	31.062	ENSORLG00000030569	-	79	31.062	Oryzias_latipes
ENSACLG00000012239	-	52	31.431	ENSORLG00000027307	-	78	31.431	Oryzias_latipes
ENSACLG00000012239	-	54	32.853	ENSORLG00020005747	-	53	32.853	Oryzias_latipes_hni
ENSACLG00000012239	-	57	33.469	ENSORLG00020022538	-	78	33.469	Oryzias_latipes_hni
ENSACLG00000012239	-	54	32.853	ENSORLG00020015468	-	53	32.853	Oryzias_latipes_hni
ENSACLG00000012239	-	50	35.205	ENSORLG00020017608	-	90	35.205	Oryzias_latipes_hni
ENSACLG00000012239	-	60	30.282	ENSORLG00020013085	-	74	30.282	Oryzias_latipes_hni
ENSACLG00000012239	-	54	41.283	ENSORLG00020016398	-	83	41.283	Oryzias_latipes_hni
ENSACLG00000012239	-	56	39.309	ENSORLG00020007648	-	89	39.309	Oryzias_latipes_hni
ENSACLG00000012239	-	64	31.062	ENSORLG00015013242	-	80	31.062	Oryzias_latipes_hsok
ENSACLG00000012239	-	65	32.118	ENSORLG00015003194	-	79	32.118	Oryzias_latipes_hsok
ENSACLG00000012239	-	55	39.474	ENSORLG00015012565	-	96	39.638	Oryzias_latipes_hsok
ENSACLG00000012239	-	53	34.681	ENSORLG00015017494	-	83	34.681	Oryzias_latipes_hsok
ENSACLG00000012239	-	52	31.431	ENSORLG00015018293	-	78	31.431	Oryzias_latipes_hsok
ENSACLG00000012239	-	63	34.793	ENSOMEG00000021861	-	76	34.562	Oryzias_melastigma
ENSACLG00000012239	-	51	36.939	ENSOMEG00000012350	-	62	36.939	Oryzias_melastigma
ENSACLG00000012239	-	61	46.230	ENSOMEG00000009707	-	88	46.230	Oryzias_melastigma
ENSACLG00000012239	-	62	32.053	ENSOMEG00000007894	-	77	32.053	Oryzias_melastigma
ENSACLG00000012239	-	55	41.235	ENSPKIG00000020388	-	82	41.235	Paramormyrops_kingsleyae
ENSACLG00000012239	-	62	30.464	ENSPKIG00000012188	-	84	30.464	Paramormyrops_kingsleyae
ENSACLG00000012239	-	56	33.195	ENSPKIG00000021764	-	72	33.195	Paramormyrops_kingsleyae
ENSACLG00000012239	-	50	37.015	ENSPKIG00000023888	-	64	37.015	Paramormyrops_kingsleyae
ENSACLG00000012239	-	58	33.749	ENSPKIG00000002357	-	65	33.749	Paramormyrops_kingsleyae
ENSACLG00000012239	-	54	35.108	ENSPKIG00000010959	-	65	35.108	Paramormyrops_kingsleyae
ENSACLG00000012239	-	53	46.080	ENSPKIG00000013293	-	89	46.080	Paramormyrops_kingsleyae
ENSACLG00000012239	-	53	46.771	ENSPMEG00000023031	-	85	46.771	Poecilia_mexicana
ENSACLG00000012239	-	54	33.959	ENSPMEG00000002683	-	77	30.248	Poecilia_mexicana
ENSACLG00000012239	-	61	34.702	ENSPREG00000004621	-	79	34.702	Poecilia_reticulata
ENSACLG00000012239	-	54	36.918	ENSPNAG00000017165	-	75	36.918	Pygocentrus_nattereri
ENSACLG00000012239	-	54	49.726	ENSSDUG00000010009	-	98	49.726	Seriola_dumerili
ENSACLG00000012239	-	50	43.704	ENSSLDG00000001005	-	73	43.704	Seriola_lalandi_dorsalis
ENSACLG00000012239	-	58	62.431	ENSSLDG00000003503	-	93	65.034	Seriola_lalandi_dorsalis
ENSACLG00000012239	-	91	58.237	ENSSLDG00000001893	-	84	59.675	Seriola_lalandi_dorsalis
ENSACLG00000012239	-	61	32.806	ENSSPAG00000006326	-	77	32.806	Stegastes_partitus
ENSACLG00000012239	-	57	31.696	ENSXMAG00000023370	-	96	31.696	Xiphophorus_maculatus
ENSACLG00000012239	-	51	35.248	ENSXMAG00000021254	-	68	35.248	Xiphophorus_maculatus
ENSACLG00000012239	-	55	34.925	ENSXMAG00000022175	-	73	33.245	Xiphophorus_maculatus
ENSACLG00000012239	-	54	33.617	ENSXMAG00000028155	-	63	33.617	Xiphophorus_maculatus
ENSACLG00000012239	-	53	31.919	ENSXMAG00000029360	-	97	31.919	Xiphophorus_maculatus
ENSACLG00000012239	-	56	30.699	ENSXMAG00000021440	-	82	30.790	Xiphophorus_maculatus
ENSACLG00000012239	-	53	33.939	ENSXMAG00000022790	-	69	33.788	Xiphophorus_maculatus
ENSACLG00000012239	-	51	35.146	ENSXMAG00000029413	-	64	35.146	Xiphophorus_maculatus
ENSACLG00000012239	-	62	30.008	ENSXMAG00000025715	-	79	30.091	Xiphophorus_maculatus
ENSACLG00000012239	-	68	30.326	ENSXMAG00000026492	-	80	30.326	Xiphophorus_maculatus
ENSACLG00000012239	-	51	35.146	ENSXMAG00000023536	-	64	35.146	Xiphophorus_maculatus
ENSACLG00000012239	-	53	33.636	ENSXMAG00000023476	-	69	33.636	Xiphophorus_maculatus
ENSACLG00000012239	-	54	33.617	ENSXMAG00000029008	-	63	33.617	Xiphophorus_maculatus
ENSACLG00000012239	-	56	32.344	ENSXMAG00000023990	-	72	32.344	Xiphophorus_maculatus