EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000012270 (Gene tree)
Gene ID: 113022265
Gene Symbol: stau1
Alias: fi67e05|wu:fi67e05|zgc:77271
Full Name: staufen double-stranded RNA binding protein 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 8750 bases
Position: chr5:15554305-15563054
Accession: 113022265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000018034	dsrm	PF00035.26	2.9e-45	1	4
ENSACLP00000018034	dsrm	PF00035.26	2.9e-45	2	4
ENSACLP00000018034	dsrm	PF00035.26	2.9e-45	3	4
ENSACLP00000018034	dsrm	PF00035.26	2.9e-45	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000018462	-	2938	-	ENSACLP00000018034	692 (aa)	XP_026023263	UPI0006CEE1FD

Gene Model

Click here to download ENSACLG00000012270's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000012270's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000012270	stau1	88	47.416	ENSACLG00000024336	stau2	99	45.686

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000012270	stau1	96	73.204	ENSG00000124214	STAU1	99	73.852	Homo_sapiens
ENSACLG00000012270	stau1	100	93.237	ENSAPOG00000017260	stau1	100	93.237	Acanthochromis_polyacanthus
ENSACLG00000012270	stau1	99	68.436	ENSAMEG00000013681	STAU1	98	68.436	Ailuropoda_melanoleuca
ENSACLG00000012270	stau1	100	93.381	ENSACIG00000015918	stau1	100	94.388	Amphilophus_citrinellus
ENSACLG00000012270	stau1	100	93.525	ENSAOCG00000012224	stau1	100	93.525	Amphiprion_ocellaris
ENSACLG00000012270	stau1	100	93.525	ENSAPEG00000012308	stau1	100	93.525	Amphiprion_percula
ENSACLG00000012270	stau1	100	93.813	ENSATEG00000024600	stau1	100	93.813	Anabas_testudineus
ENSACLG00000012270	stau1	99	71.567	ENSAPLG00000010527	STAU1	100	71.468	Anas_platyrhynchos
ENSACLG00000012270	stau1	99	72.017	ENSACAG00000015909	STAU1	99	71.915	Anolis_carolinensis
ENSACLG00000012270	stau1	96	72.169	ENSANAG00000032714	STAU1	99	72.169	Aotus_nancymaae
ENSACLG00000012270	stau1	96	80.309	ENSAMXG00000016812	stau1	98	80.309	Astyanax_mexicanus
ENSACLG00000012270	stau1	96	72.816	ENSBTAG00000000241	STAU1	99	72.816	Bos_taurus
ENSACLG00000012270	stau1	96	73.010	ENSCJAG00000016233	STAU1	99	73.010	Callithrix_jacchus
ENSACLG00000012270	stau1	96	70.425	ENSCAFG00000011347	STAU1	99	68.814	Canis_familiaris
ENSACLG00000012270	stau1	96	68.814	ENSCAFG00020017123	STAU1	99	72.195	Canis_lupus_dingo
ENSACLG00000012270	stau1	96	72.427	ENSCHIG00000001799	-	99	72.427	Capra_hircus
ENSACLG00000012270	stau1	96	72.233	ENSTSYG00000036179	-	99	72.233	Carlito_syrichta
ENSACLG00000012270	stau1	72	72.655	ENSCAPG00000017041	STAU1	99	72.455	Cavia_aperea
ENSACLG00000012270	stau1	71	71.000	ENSCPOG00000005566	STAU1	99	71.000	Cavia_porcellus
ENSACLG00000012270	stau1	96	72.169	ENSCCAG00000034339	STAU1	99	72.169	Cebus_capucinus
ENSACLG00000012270	stau1	96	75.536	ENSCATG00000028474	STAU1	99	75.536	Cercocebus_atys
ENSACLG00000012270	stau1	71	73.600	ENSCLAG00000006516	-	99	73.600	Chinchilla_lanigera
ENSACLG00000012270	stau1	71	59.839	ENSCLAG00000002784	-	99	59.839	Chinchilla_lanigera
ENSACLG00000012270	stau1	72	74.052	ENSCSAG00000014986	STAU1	99	74.052	Chlorocebus_sabaeus
ENSACLG00000012270	stau1	96	73.256	ENSCHOG00000001511	STAU1	99	73.256	Choloepus_hoffmanni
ENSACLG00000012270	stau1	99	72.482	ENSCPBG00000026741	STAU1	100	71.871	Chrysemys_picta_bellii
ENSACLG00000012270	stau1	96	73.398	ENSCANG00000039220	STAU1	99	73.398	Colobus_angolensis_palliatus
ENSACLG00000012270	stau1	71	69.600	ENSCGRG00001013453	Stau1	99	69.600	Cricetulus_griseus_chok1gshd
ENSACLG00000012270	stau1	71	69.600	ENSCGRG00000007216	Stau1	99	69.600	Cricetulus_griseus_crigri
ENSACLG00000012270	stau1	100	77.183	ENSCSEG00000000792	stau1	100	78.169	Cynoglossus_semilaevis
ENSACLG00000012270	stau1	96	83.037	ENSCVAG00000005906	stau1	100	84.418	Cyprinodon_variegatus
ENSACLG00000012270	stau1	100	79.627	ENSDARG00000044182	stau1	100	80.534	Danio_rerio
ENSACLG00000012270	stau1	96	73.256	ENSDNOG00000014933	STAU1	97	73.062	Dasypus_novemcinctus
ENSACLG00000012270	stau1	71	72.267	ENSDORG00000030220	Stau1	99	72.267	Dipodomys_ordii
ENSACLG00000012270	stau1	64	75.497	ENSETEG00000018235	STAU1	87	75.497	Echinops_telfairi
ENSACLG00000012270	stau1	96	72.169	ENSEASG00005023343	STAU1	99	72.169	Equus_asinus_asinus
ENSACLG00000012270	stau1	96	73.010	ENSECAG00000012894	STAU1	99	73.010	Equus_caballus
ENSACLG00000012270	stau1	65	76.904	ENSEEUG00000014344	STAU1	68	76.904	Erinaceus_europaeus
ENSACLG00000012270	stau1	99	82.768	ENSELUG00000002529	stau1	99	84.292	Esox_lucius
ENSACLG00000012270	stau1	96	71.111	ENSFCAG00000001447	STAU1	99	71.111	Felis_catus
ENSACLG00000012270	stau1	99	72.961	ENSFALG00000012940	STAU1	100	73.000	Ficedula_albicollis
ENSACLG00000012270	stau1	71	73.200	ENSFDAG00000014119	-	99	73.200	Fukomys_damarensis
ENSACLG00000012270	stau1	72	56.088	ENSFDAG00000020837	-	99	55.179	Fukomys_damarensis
ENSACLG00000012270	stau1	99	88.184	ENSFHEG00000013517	stau1	99	88.184	Fundulus_heteroclitus
ENSACLG00000012270	stau1	100	72.867	ENSGMOG00000016850	stau1	100	72.867	Gadus_morhua
ENSACLG00000012270	stau1	99	73.820	ENSGALG00000004736	STAU1	100	73.714	Gallus_gallus
ENSACLG00000012270	stau1	99	89.337	ENSGAFG00000010437	stau1	99	89.337	Gambusia_affinis
ENSACLG00000012270	stau1	100	91.198	ENSGACG00000001352	stau1	100	91.198	Gasterosteus_aculeatus
ENSACLG00000012270	stau1	99	73.247	ENSGAGG00000009825	STAU1	100	72.624	Gopherus_agassizii
ENSACLG00000012270	stau1	96	67.939	ENSGGOG00000025351	STAU1	99	76.923	Gorilla_gorilla
ENSACLG00000012270	stau1	100	99.855	ENSHBUG00000023668	stau1	100	99.855	Haplochromis_burtoni
ENSACLG00000012270	stau1	71	74.494	ENSHGLG00000008730	STAU1	99	74.494	Heterocephalus_glaber_female
ENSACLG00000012270	stau1	71	74.494	ENSHGLG00100000098	STAU1	99	74.494	Heterocephalus_glaber_male
ENSACLG00000012270	stau1	100	84.648	ENSHCOG00000018461	stau1	100	84.648	Hippocampus_comes
ENSACLG00000012270	stau1	100	75.252	ENSIPUG00000023725	stau1	100	75.252	Ictalurus_punctatus
ENSACLG00000012270	stau1	71	73.077	ENSSTOG00000003634	STAU1	99	73.077	Ictidomys_tridecemlineatus
ENSACLG00000012270	stau1	71	72.267	ENSJJAG00000020032	Stau1	99	72.267	Jaculus_jaculus
ENSACLG00000012270	stau1	99	86.187	ENSKMAG00000007135	stau1	99	86.763	Kryptolebias_marmoratus
ENSACLG00000012270	stau1	100	91.223	ENSLBEG00000020172	stau1	100	91.223	Labrus_bergylta
ENSACLG00000012270	stau1	98	72.701	ENSLACG00000016157	STAU1	97	72.701	Latimeria_chalumnae
ENSACLG00000012270	stau1	99	77.842	ENSLOCG00000003134	stau1	100	78.448	Lepisosteus_oculatus
ENSACLG00000012270	stau1	74	73.346	ENSLAFG00000003238	STAU1	99	73.346	Loxodonta_africana
ENSACLG00000012270	stau1	96	75.536	ENSMFAG00000040931	STAU1	99	76.667	Macaca_fascicularis
ENSACLG00000012270	stau1	96	68.069	ENSMMUG00000002302	STAU1	99	76.667	Macaca_mulatta
ENSACLG00000012270	stau1	96	74.576	ENSMNEG00000033821	STAU1	99	74.576	Macaca_nemestrina
ENSACLG00000012270	stau1	96	73.204	ENSMLEG00000031383	STAU1	99	73.204	Mandrillus_leucophaeus
ENSACLG00000012270	stau1	100	93.525	ENSMAMG00000017586	stau1	100	93.703	Mastacembelus_armatus
ENSACLG00000012270	stau1	100	99.855	ENSMZEG00005015605	stau1	100	99.855	Maylandia_zebra
ENSACLG00000012270	stau1	99	71.567	ENSMGAG00000004719	STAU1	100	71.468	Meleagris_gallopavo
ENSACLG00000012270	stau1	71	69.600	ENSMAUG00000013846	Stau1	99	69.600	Mesocricetus_auratus
ENSACLG00000012270	stau1	96	71.401	ENSMICG00000001995	STAU1	99	71.401	Microcebus_murinus
ENSACLG00000012270	stau1	71	70.200	ENSMOCG00000018743	Stau1	99	70.200	Microtus_ochrogaster
ENSACLG00000012270	stau1	100	88.345	ENSMMOG00000015455	stau1	100	88.345	Mola_mola
ENSACLG00000012270	stau1	96	72.337	ENSMODG00000016276	STAU1	99	72.337	Monodelphis_domestica
ENSACLG00000012270	stau1	100	92.230	ENSMALG00000000045	stau1	100	92.230	Monopterus_albus
ENSACLG00000012270	stau1	71	70.672	MGP_CAROLIEiJ_G0024699	Stau1	100	70.672	Mus_caroli
ENSACLG00000012270	stau1	71	70.672	ENSMUSG00000039536	Stau1	100	70.672	Mus_musculus
ENSACLG00000012270	stau1	71	70.243	MGP_PahariEiJ_G0026141	Stau1	99	70.243	Mus_pahari
ENSACLG00000012270	stau1	71	71.138	MGP_SPRETEiJ_G0025619	Stau1	100	71.138	Mus_spretus
ENSACLG00000012270	stau1	96	70.149	ENSMPUG00000017581	STAU1	99	70.149	Mustela_putorius_furo
ENSACLG00000012270	stau1	96	71.845	ENSMLUG00000008407	STAU1	97	71.845	Myotis_lucifugus
ENSACLG00000012270	stau1	71	71.400	ENSNGAG00000007108	Stau1	99	71.400	Nannospalax_galili
ENSACLG00000012270	stau1	100	99.711	ENSNBRG00000017596	stau1	100	99.711	Neolamprologus_brichardi
ENSACLG00000012270	stau1	96	73.010	ENSNLEG00000006955	STAU1	99	73.010	Nomascus_leucogenys
ENSACLG00000012270	stau1	66	78.834	ENSMEUG00000003263	STAU1	80	78.834	Notamacropus_eugenii
ENSACLG00000012270	stau1	93	68.819	ENSOPRG00000014569	STAU1	93	68.819	Ochotona_princeps
ENSACLG00000012270	stau1	72	73.453	ENSODEG00000006523	STAU1	99	73.453	Octodon_degus
ENSACLG00000012270	stau1	100	96.208	ENSONIG00000004152	stau1	99	96.208	Oreochromis_niloticus
ENSACLG00000012270	stau1	97	72.165	ENSOANG00000006394	STAU1	96	72.059	Ornithorhynchus_anatinus
ENSACLG00000012270	stau1	96	70.055	ENSOCUG00000006214	STAU1	99	70.055	Oryctolagus_cuniculus
ENSACLG00000012270	stau1	99	86.599	ENSOMEG00000002388	stau1	99	86.599	Oryzias_melastigma
ENSACLG00000012270	stau1	72	51.098	ENSOGAG00000028222	-	99	50.600	Otolemur_garnettii
ENSACLG00000012270	stau1	96	73.204	ENSOGAG00000002127	STAU1	97	73.204	Otolemur_garnettii
ENSACLG00000012270	stau1	96	72.427	ENSOARG00000012204	STAU1	97	72.427	Ovis_aries
ENSACLG00000012270	stau1	96	67.939	ENSPPAG00000032023	STAU1	99	76.923	Pan_paniscus
ENSACLG00000012270	stau1	96	71.296	ENSPPRG00000003436	STAU1	99	74.052	Panthera_pardus
ENSACLG00000012270	stau1	96	71.296	ENSPTIG00000011768	STAU1	99	73.622	Panthera_tigris_altaica
ENSACLG00000012270	stau1	96	67.939	ENSPTRG00000023130	STAU1	99	76.923	Pan_troglodytes
ENSACLG00000012270	stau1	96	75.536	ENSPANG00000020560	STAU1	99	75.536	Papio_anubis
ENSACLG00000012270	stau1	100	79.173	ENSPKIG00000024588	stau1	100	79.743	Paramormyrops_kingsleyae
ENSACLG00000012270	stau1	99	73.534	ENSPSIG00000010731	STAU1	99	72.908	Pelodiscus_sinensis
ENSACLG00000012270	stau1	99	85.366	ENSPMGG00000018553	stau1	100	85.100	Periophthalmus_magnuspinnatus
ENSACLG00000012270	stau1	71	70.200	ENSPEMG00000022045	Stau1	99	70.200	Peromyscus_maniculatus_bairdii
ENSACLG00000012270	stau1	99	70.455	ENSPCIG00000023269	STAU1	97	74.951	Phascolarctos_cinereus
ENSACLG00000012270	stau1	100	87.931	ENSPFOG00000017253	stau1	99	88.058	Poecilia_formosa
ENSACLG00000012270	stau1	58	84.826	ENSPLAG00000014829	stau1	97	81.538	Poecilia_latipinna
ENSACLG00000012270	stau1	99	84.317	ENSPMEG00000007495	stau1	99	84.317	Poecilia_mexicana
ENSACLG00000012270	stau1	100	88.218	ENSPREG00000003477	stau1	99	88.345	Poecilia_reticulata
ENSACLG00000012270	stau1	96	73.062	ENSPPYG00000011111	STAU1	99	73.062	Pongo_abelii
ENSACLG00000012270	stau1	70	66.253	ENSPCAG00000002459	STAU1	99	66.253	Procavia_capensis
ENSACLG00000012270	stau1	96	72.621	ENSPCOG00000027746	STAU1	99	72.621	Propithecus_coquereli
ENSACLG00000012270	stau1	63	77.483	ENSPVAG00000015019	STAU1	86	77.483	Pteropus_vampyrus
ENSACLG00000012270	stau1	100	99.855	ENSPNYG00000014436	stau1	100	99.855	Pundamilia_nyererei
ENSACLG00000012270	stau1	100	79.799	ENSPNAG00000011323	stau1	100	80.687	Pygocentrus_nattereri
ENSACLG00000012270	stau1	71	69.800	ENSRNOG00000007781	Stau1	99	69.800	Rattus_norvegicus
ENSACLG00000012270	stau1	72	73.307	ENSRBIG00000037345	STAU1	100	73.108	Rhinopithecus_bieti
ENSACLG00000012270	stau1	96	74.576	ENSRROG00000039008	STAU1	99	74.576	Rhinopithecus_roxellana
ENSACLG00000012270	stau1	96	72.169	ENSSBOG00000034448	STAU1	99	72.169	Saimiri_boliviensis_boliviensis
ENSACLG00000012270	stau1	96	75.581	ENSSHAG00000009492	STAU1	97	75.581	Sarcophilus_harrisii
ENSACLG00000012270	stau1	100	80.086	ENSSFOG00015021497	stau1	100	80.086	Scleropages_formosus
ENSACLG00000012270	stau1	100	91.799	ENSSMAG00000017410	stau1	100	91.799	Scophthalmus_maximus
ENSACLG00000012270	stau1	100	94.101	ENSSDUG00000019439	stau1	100	94.101	Seriola_dumerili
ENSACLG00000012270	stau1	100	94.388	ENSSLDG00000025040	stau1	100	94.388	Seriola_lalandi_dorsalis
ENSACLG00000012270	stau1	99	72.766	ENSSPUG00000017983	STAU1	99	72.727	Sphenodon_punctatus
ENSACLG00000012270	stau1	100	94.101	ENSSPAG00000019275	stau1	100	94.101	Stegastes_partitus
ENSACLG00000012270	stau1	96	73.010	ENSSSCG00000027444	STAU1	99	73.719	Sus_scrofa
ENSACLG00000012270	stau1	100	70.718	ENSTGUG00000008784	STAU1	100	70.718	Taeniopygia_guttata
ENSACLG00000012270	stau1	100	87.194	ENSTRUG00000005837	stau1	100	87.770	Takifugu_rubripes
ENSACLG00000012270	stau1	97	86.053	ENSTNIG00000014732	stau1	99	86.053	Tetraodon_nigroviridis
ENSACLG00000012270	stau1	96	62.016	ENSTBEG00000009404	STAU1	99	62.016	Tupaia_belangeri
ENSACLG00000012270	stau1	66	73.377	ENSTTRG00000004285	STAU1	80	73.377	Tursiops_truncatus
ENSACLG00000012270	stau1	72	72.638	ENSUAMG00000025449	STAU1	99	72.638	Ursus_americanus
ENSACLG00000012270	stau1	54	69.531	ENSUMAG00000024475	STAU1	89	69.531	Ursus_maritimus
ENSACLG00000012270	stau1	96	73.010	ENSVPAG00000001313	STAU1	99	73.010	Vicugna_pacos
ENSACLG00000012270	stau1	96	68.960	ENSVVUG00000022325	STAU1	99	68.960	Vulpes_vulpes
ENSACLG00000012270	stau1	97	71.259	ENSXETG00000001783	stau1	96	71.111	Xenopus_tropicalis
ENSACLG00000012270	stau1	56	84.359	ENSXCOG00000008804	stau1	98	84.615	Xiphophorus_couchianus
ENSACLG00000012270	stau1	99	88.761	ENSXMAG00000016175	stau1	99	88.761	Xiphophorus_maculatus