EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000012298 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4396 bases
Position: chr7:39530060-39534455
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000017980	RVT_1	PF00078.27	1.5e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000018409	-	4396	-	ENSACLP00000017980	1256 (aa)	-	-

Gene Model

Click here to download ENSACLG00000012298's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000012298's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000012298	-	96	30.320	ENSACLG00000019378	-	82	30.320
ENSACLG00000012298	-	89	32.566	ENSACLG00000018177	-	97	32.703
ENSACLG00000012298	-	72	35.714	ENSACLG00000010059	-	97	35.818
ENSACLG00000012298	-	99	31.007	ENSACLG00000012503	-	98	30.935
ENSACLG00000012298	-	85	43.914	ENSACLG00000026023	-	98	43.720
ENSACLG00000012298	-	75	34.211	ENSACLG00000009410	-	96	34.295
ENSACLG00000012298	-	62	31.566	ENSACLG00000008786	-	98	31.566
ENSACLG00000012298	-	99	31.007	ENSACLG00000023207	-	98	30.935
ENSACLG00000012298	-	75	31.562	ENSACLG00000007324	-	98	31.562
ENSACLG00000012298	-	68	34.808	ENSACLG00000003130	-	94	34.808
ENSACLG00000012298	-	99	31.638	ENSACLG00000014673	-	98	31.833
ENSACLG00000012298	-	99	30.611	ENSACLG00000019734	-	99	30.216
ENSACLG00000012298	-	99	31.890	ENSACLG00000003800	-	98	31.946
ENSACLG00000012298	-	94	31.645	ENSACLG00000025597	-	96	31.645
ENSACLG00000012298	-	99	30.562	ENSACLG00000023597	-	97	30.616
ENSACLG00000012298	-	86	31.164	ENSACLG00000010561	-	99	31.164
ENSACLG00000012298	-	80	33.562	ENSACLG00000012223	-	98	33.562
ENSACLG00000012298	-	83	31.909	ENSACLG00000015440	-	95	31.719
ENSACLG00000012298	-	95	31.414	ENSACLG00000009895	-	94	31.414
ENSACLG00000012298	-	70	32.000	ENSACLG00000018473	-	98	32.000
ENSACLG00000012298	-	65	43.689	ENSACLG00000027045	-	99	43.689
ENSACLG00000012298	-	62	31.400	ENSACLG00000020106	-	99	31.519
ENSACLG00000012298	-	76	31.379	ENSACLG00000027433	-	99	31.379
ENSACLG00000012298	-	65	33.454	ENSACLG00000011463	-	99	33.454
ENSACLG00000012298	-	93	31.472	ENSACLG00000002748	-	98	31.472
ENSACLG00000012298	-	99	44.462	ENSACLG00000023850	-	98	44.382
ENSACLG00000012298	-	99	33.307	ENSACLG00000005466	-	97	32.936
ENSACLG00000012298	-	99	32.123	ENSACLG00000002299	-	97	32.000
ENSACLG00000012298	-	66	32.497	ENSACLG00000020021	-	99	32.497
ENSACLG00000012298	-	72	36.273	ENSACLG00000014178	-	92	36.005
ENSACLG00000012298	-	81	34.339	ENSACLG00000007947	-	91	34.224
ENSACLG00000012298	-	62	32.497	ENSACLG00000020885	-	98	32.497
ENSACLG00000012298	-	95	30.475	ENSACLG00000023216	-	81	30.475

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000012298	-	95	31.631	ENSAOCG00000008973	-	82	31.631	Amphiprion_ocellaris
ENSACLG00000012298	-	99	37.698	ENSAPEG00000012642	-	98	37.690	Amphiprion_percula
ENSACLG00000012298	-	99	44.019	ENSAMXG00000031230	-	98	43.846	Astyanax_mexicanus
ENSACLG00000012298	-	99	31.201	ENSAMXG00000042761	-	98	31.200	Astyanax_mexicanus
ENSACLG00000012298	-	65	43.803	ENSAMXG00000033587	-	99	43.803	Astyanax_mexicanus
ENSACLG00000012298	-	79	43.539	ENSAMXG00000037218	-	99	43.539	Astyanax_mexicanus
ENSACLG00000012298	-	64	32.727	ENSAMXG00000036752	-	99	32.727	Astyanax_mexicanus
ENSACLG00000012298	-	99	44.756	ENSAMXG00000034221	-	98	44.641	Astyanax_mexicanus
ENSACLG00000012298	-	99	49.124	ENSKMAG00000014428	-	98	49.113	Kryptolebias_marmoratus
ENSACLG00000012298	-	99	42.971	ENSKMAG00000020345	-	99	42.880	Kryptolebias_marmoratus
ENSACLG00000012298	-	99	53.637	ENSKMAG00000018279	-	99	53.586	Kryptolebias_marmoratus
ENSACLG00000012298	-	99	31.394	ENSKMAG00000013004	-	97	31.376	Kryptolebias_marmoratus
ENSACLG00000012298	-	94	32.660	ENSKMAG00000002601	-	95	32.653	Kryptolebias_marmoratus
ENSACLG00000012298	-	77	31.735	ENSKMAG00000006893	-	99	31.735	Kryptolebias_marmoratus
ENSACLG00000012298	-	99	30.521	ENSKMAG00000007098	-	97	30.934	Kryptolebias_marmoratus
ENSACLG00000012298	-	92	36.923	ENSKMAG00000006598	-	99	36.923	Kryptolebias_marmoratus
ENSACLG00000012298	-	61	30.581	ENSLBEG00000017877	-	96	30.581	Labrus_bergylta
ENSACLG00000012298	-	78	41.033	ENSMZEG00005001544	-	98	41.033	Maylandia_zebra
ENSACLG00000012298	-	59	31.565	ENSMZEG00005013632	-	99	31.300	Maylandia_zebra
ENSACLG00000012298	-	52	44.427	ENSONIG00000020880	-	97	44.427	Oreochromis_niloticus
ENSACLG00000012298	-	71	45.151	ENSONIG00000020778	-	98	45.151	Oreochromis_niloticus
ENSACLG00000012298	-	99	47.158	ENSORLG00000024310	-	99	47.135	Oryzias_latipes
ENSACLG00000012298	-	62	32.576	ENSORLG00000023193	-	93	32.491	Oryzias_latipes
ENSACLG00000012298	-	98	31.065	ENSORLG00000025420	-	98	31.255	Oryzias_latipes
ENSACLG00000012298	-	100	63.384	ENSORLG00000029419	-	99	63.384	Oryzias_latipes
ENSACLG00000012298	-	98	31.065	ENSORLG00000026691	-	98	31.255	Oryzias_latipes
ENSACLG00000012298	-	98	30.905	ENSORLG00000029798	-	98	31.093	Oryzias_latipes
ENSACLG00000012298	-	99	31.696	ENSORLG00020008142	-	97	31.566	Oryzias_latipes_hni
ENSACLG00000012298	-	99	43.795	ENSORLG00020000561	-	98	43.654	Oryzias_latipes_hni
ENSACLG00000012298	-	60	48.886	ENSORLG00020003581	-	94	48.886	Oryzias_latipes_hni
ENSACLG00000012298	-	98	30.905	ENSORLG00020020951	-	98	31.093	Oryzias_latipes_hni
ENSACLG00000012298	-	70	44.381	ENSORLG00020016539	-	99	44.381	Oryzias_latipes_hni
ENSACLG00000012298	-	99	43.795	ENSORLG00015013713	-	98	43.654	Oryzias_latipes_hsok
ENSACLG00000012298	-	97	48.695	ENSORLG00015002592	-	95	48.668	Oryzias_latipes_hsok
ENSACLG00000012298	-	99	30.996	ENSORLG00015002129	-	96	31.084	Oryzias_latipes_hsok
ENSACLG00000012298	-	80	32.083	ENSOMEG00000021560	-	97	32.083	Oryzias_melastigma
ENSACLG00000012298	-	62	42.875	ENSOMEG00000006131	-	99	42.875	Oryzias_melastigma
ENSACLG00000012298	-	75	33.647	ENSPFOG00000021895	-	95	33.547	Poecilia_formosa
ENSACLG00000012298	-	99	37.799	ENSPREG00000018911	-	97	37.881	Poecilia_reticulata
ENSACLG00000012298	-	98	41.748	ENSPREG00000005522	-	99	41.762	Poecilia_reticulata
ENSACLG00000012298	-	73	34.136	ENSSLDG00000010601	-	87	34.136	Seriola_lalandi_dorsalis
ENSACLG00000012298	-	72	32.609	ENSXETG00000034016	-	91	32.609	Xenopus_tropicalis
ENSACLG00000012298	-	94	48.101	ENSXMAG00000028274	-	99	48.101	Xiphophorus_maculatus
ENSACLG00000012298	-	93	31.967	ENSXMAG00000027558	-	93	32.007	Xiphophorus_maculatus
ENSACLG00000012298	-	68	53.584	ENSXMAG00000024492	-	99	53.584	Xiphophorus_maculatus
ENSACLG00000012298	-	99	31.220	ENSXMAG00000027070	-	97	31.140	Xiphophorus_maculatus
ENSACLG00000012298	-	66	53.533	ENSXMAG00000021762	-	96	53.533	Xiphophorus_maculatus
ENSACLG00000012298	-	65	32.044	ENSXMAG00000023805	-	99	32.044	Xiphophorus_maculatus