EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000012317 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 6455 bases
Position: chr19:3391328-3397782
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000018001	MMR_HSR1	PF01926.23	4.8e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000018431	-	5200	-	ENSACLP00000018001	520 (aa)	-	-

Gene Model

Click here to download ENSACLG00000012317's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000012317's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000012317	-	70	31.513	ENSACLG00000008599	-	71	31.513
ENSACLG00000012317	-	67	33.673	ENSACLG00000008592	-	88	33.673
ENSACLG00000012317	-	68	32.340	ENSACLG00000001976	-	74	32.340
ENSACLG00000012317	-	75	34.975	ENSACLG00000005659	-	87	34.975

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000012317	-	99	70.520	ENSAOCG00000004245	-	99	70.520	Amphiprion_ocellaris
ENSACLG00000012317	-	55	37.186	ENSAOCG00000013686	-	59	37.186	Amphiprion_ocellaris
ENSACLG00000012317	-	74	32.836	ENSATEG00000012058	-	52	32.836	Anabas_testudineus
ENSACLG00000012317	-	97	65.873	ENSFHEG00000007909	-	100	65.873	Fundulus_heteroclitus
ENSACLG00000012317	-	75	32.727	ENSHBUG00000011156	-	82	32.743	Haplochromis_burtoni
ENSACLG00000012317	-	73	30.131	ENSHBUG00000003015	-	50	30.131	Haplochromis_burtoni
ENSACLG00000012317	-	77	32.743	ENSHBUG00000006928	-	84	32.759	Haplochromis_burtoni
ENSACLG00000012317	-	85	30.038	ENSKMAG00000010851	-	51	30.153	Kryptolebias_marmoratus
ENSACLG00000012317	-	54	67.143	ENSLBEG00000003708	-	99	67.143	Labrus_bergylta
ENSACLG00000012317	-	73	30.667	ENSLBEG00000008506	-	80	30.667	Labrus_bergylta
ENSACLG00000012317	-	50	31.502	ENSLBEG00000010625	-	58	35.071	Labrus_bergylta
ENSACLG00000012317	-	64	99.698	ENSMZEG00005002897	-	100	99.698	Maylandia_zebra
ENSACLG00000012317	-	80	34.343	ENSONIG00000014210	-	79	34.343	Oreochromis_niloticus
ENSACLG00000012317	-	99	65.830	ENSOMEG00000004883	-	99	65.830	Oryzias_melastigma
ENSACLG00000012317	-	88	30.252	ENSPFOG00000001388	-	55	31.068	Poecilia_formosa
ENSACLG00000012317	-	73	30.303	ENSPNYG00000008570	-	51	30.303	Pundamilia_nyererei
ENSACLG00000012317	-	85	30.364	ENSPNYG00000003568	-	54	30.488	Pundamilia_nyererei
ENSACLG00000012317	-	83	32.159	ENSPNAG00000026011	-	55	32.159	Pygocentrus_nattereri