EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000012401 (Gene tree)
Gene ID: 113018696
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 55759 bases
Position: chr1:8413394-8469152
Accession: 113018696
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000018313	CPSF_A	PF03178.15	2e-84	1	1
ENSACLP00000018385	CPSF_A	PF03178.15	2.9e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000018815	-	2682	-	ENSACLP00000018385	893 (aa)	-	-
ENSACLT00000018747	-	7911	-	ENSACLP00000018313	1140 (aa)	XP_026017799	UPI0003BD139E

Gene Model

Click here to download ENSACLG00000012401's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000012401's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000012401	ddb1	100	91.404	ENSG00000167986	DDB1	100	95.890	Homo_sapiens
ENSACLG00000012401	ddb1	99	97.987	ENSAPOG00000005036	ddb1	99	98.571	Acanthochromis_polyacanthus
ENSACLG00000012401	ddb1	100	91.491	ENSAMEG00000016518	DDB1	100	91.491	Ailuropoda_melanoleuca
ENSACLG00000012401	ddb1	99	98.546	ENSACIG00000020624	ddb1	99	99.082	Amphilophus_citrinellus
ENSACLG00000012401	ddb1	100	98.596	ENSAOCG00000003066	ddb1	100	98.596	Amphiprion_ocellaris
ENSACLG00000012401	ddb1	100	98.596	ENSAPEG00000000092	ddb1	100	98.596	Amphiprion_percula
ENSACLG00000012401	ddb1	99	98.322	ENSATEG00000020571	ddb1	97	98.605	Anabas_testudineus
ENSACLG00000012401	ddb1	99	89.912	ENSAPLG00000007174	DDB1	99	89.912	Anas_platyrhynchos
ENSACLG00000012401	ddb1	100	90.877	ENSACAG00000017758	DDB1	100	90.877	Anolis_carolinensis
ENSACLG00000012401	ddb1	100	91.404	ENSANAG00000021878	DDB1	100	91.404	Aotus_nancymaae
ENSACLG00000012401	ddb1	100	91.404	ENSBTAG00000021569	DDB1	93	91.404	Bos_taurus
ENSACLG00000012401	ddb1	100	36.869	WBGene00010890	ddb-1	100	36.869	Caenorhabditis_elegans
ENSACLG00000012401	ddb1	100	91.404	ENSCJAG00000019319	DDB1	100	91.404	Callithrix_jacchus
ENSACLG00000012401	ddb1	100	91.491	ENSCAFG00000016264	DDB1	100	91.491	Canis_familiaris
ENSACLG00000012401	ddb1	99	90.604	ENSCAFG00020012722	DDB1	99	91.721	Canis_lupus_dingo
ENSACLG00000012401	ddb1	100	91.404	ENSCHIG00000014969	DDB1	100	91.404	Capra_hircus
ENSACLG00000012401	ddb1	100	91.053	ENSTSYG00000008027	DDB1	100	91.053	Carlito_syrichta
ENSACLG00000012401	ddb1	98	91.332	ENSCAPG00000010786	DDB1	100	91.332	Cavia_aperea
ENSACLG00000012401	ddb1	100	91.316	ENSCPOG00000009956	DDB1	100	91.316	Cavia_porcellus
ENSACLG00000012401	ddb1	100	91.404	ENSCCAG00000035883	DDB1	100	91.404	Cebus_capucinus
ENSACLG00000012401	ddb1	100	88.976	ENSCATG00000044495	DDB1	100	88.976	Cercocebus_atys
ENSACLG00000012401	ddb1	100	91.404	ENSCLAG00000004126	DDB1	100	91.404	Chinchilla_lanigera
ENSACLG00000012401	ddb1	100	91.404	ENSCSAG00000006392	DDB1	100	91.404	Chlorocebus_sabaeus
ENSACLG00000012401	ddb1	87	88.997	ENSCHOG00000011377	DDB1	90	85.038	Choloepus_hoffmanni
ENSACLG00000012401	ddb1	100	91.228	ENSCPBG00000017728	DDB1	100	91.228	Chrysemys_picta_bellii
ENSACLG00000012401	ddb1	100	61.545	ENSCING00000007437	-	100	61.545	Ciona_intestinalis
ENSACLG00000012401	ddb1	94	60.645	ENSCSAVG00000004783	-	100	60.645	Ciona_savignyi
ENSACLG00000012401	ddb1	100	91.404	ENSCANG00000019948	DDB1	100	91.404	Colobus_angolensis_palliatus
ENSACLG00000012401	ddb1	100	91.491	ENSCGRG00001016599	Ddb1	100	91.491	Cricetulus_griseus_chok1gshd
ENSACLG00000012401	ddb1	100	91.491	ENSCGRG00000013427	Ddb1	100	91.491	Cricetulus_griseus_crigri
ENSACLG00000012401	ddb1	99	97.204	ENSCSEG00000012499	ddb1	99	96.255	Cynoglossus_semilaevis
ENSACLG00000012401	ddb1	99	97.092	ENSCVAG00000019531	ddb1	99	97.577	Cyprinodon_variegatus
ENSACLG00000012401	ddb1	100	92.469	ENSDARG00000074431	ddb1	100	92.469	Danio_rerio
ENSACLG00000012401	ddb1	99	90.604	ENSDNOG00000014884	DDB1	97	91.721	Dasypus_novemcinctus
ENSACLG00000012401	ddb1	84	95.000	ENSDORG00000000127	Ddb1	100	95.000	Dipodomys_ordii
ENSACLG00000012401	ddb1	100	60.524	FBgn0260962	pic	100	60.524	Drosophila_melanogaster
ENSACLG00000012401	ddb1	71	94.882	ENSETEG00000001053	-	71	94.882	Echinops_telfairi
ENSACLG00000012401	ddb1	99	83.766	ENSEBUG00000014593	ddb1	97	83.766	Eptatretus_burgeri
ENSACLG00000012401	ddb1	100	91.491	ENSEASG00005008184	DDB1	100	91.491	Equus_asinus_asinus
ENSACLG00000012401	ddb1	100	91.491	ENSECAG00000012136	DDB1	100	91.491	Equus_caballus
ENSACLG00000012401	ddb1	85	87.710	ENSEEUG00000003194	DDB1	85	87.710	Erinaceus_europaeus
ENSACLG00000012401	ddb1	100	97.018	ENSELUG00000023868	ddb1	100	97.018	Esox_lucius
ENSACLG00000012401	ddb1	100	91.491	ENSFCAG00000029716	DDB1	100	91.491	Felis_catus
ENSACLG00000012401	ddb1	100	90.639	ENSFALG00000011981	DDB1	100	90.639	Ficedula_albicollis
ENSACLG00000012401	ddb1	100	91.404	ENSFDAG00000005128	DDB1	100	91.404	Fukomys_damarensis
ENSACLG00000012401	ddb1	90	96.774	ENSFHEG00000022133	ddb1	99	96.774	Fundulus_heteroclitus
ENSACLG00000012401	ddb1	81	98.662	ENSGMOG00000019386	ddb1	94	98.662	Gadus_morhua
ENSACLG00000012401	ddb1	100	91.053	ENSGALG00000042333	DDB1	100	91.053	Gallus_gallus
ENSACLG00000012401	ddb1	99	97.539	ENSGAFG00000013142	ddb1	99	97.950	Gambusia_affinis
ENSACLG00000012401	ddb1	99	97.763	ENSGACG00000017182	ddb1	100	97.159	Gasterosteus_aculeatus
ENSACLG00000012401	ddb1	95	91.052	ENSGAGG00000014124	DDB1	100	91.052	Gopherus_agassizii
ENSACLG00000012401	ddb1	100	91.404	ENSGGOG00000004052	DDB1	100	91.404	Gorilla_gorilla
ENSACLG00000012401	ddb1	100	100.000	ENSHBUG00000008873	ddb1	100	100.000	Haplochromis_burtoni
ENSACLG00000012401	ddb1	100	91.316	ENSHGLG00000018430	DDB1	100	91.316	Heterocephalus_glaber_female
ENSACLG00000012401	ddb1	100	90.351	ENSHGLG00100014475	DDB1	100	90.351	Heterocephalus_glaber_male
ENSACLG00000012401	ddb1	99	97.539	ENSHCOG00000018670	ddb1	98	97.955	Hippocampus_comes
ENSACLG00000012401	ddb1	100	95.965	ENSIPUG00000005612	DDB1	100	95.965	Ictalurus_punctatus
ENSACLG00000012401	ddb1	100	91.404	ENSSTOG00000007552	DDB1	100	91.404	Ictidomys_tridecemlineatus
ENSACLG00000012401	ddb1	100	91.316	ENSJJAG00000017769	Ddb1	100	91.316	Jaculus_jaculus
ENSACLG00000012401	ddb1	99	97.763	ENSKMAG00000002315	ddb1	99	98.043	Kryptolebias_marmoratus
ENSACLG00000012401	ddb1	98	98.171	ENSLBEG00000017065	ddb1	99	98.751	Labrus_bergylta
ENSACLG00000012401	ddb1	100	90.981	ENSLACG00000017611	DDB1	100	90.981	Latimeria_chalumnae
ENSACLG00000012401	ddb1	92	87.676	ENSLOCG00000000012	ddb1	100	87.676	Lepisosteus_oculatus
ENSACLG00000012401	ddb1	100	91.316	ENSLAFG00000011513	DDB1	100	91.316	Loxodonta_africana
ENSACLG00000012401	ddb1	100	91.404	ENSMFAG00000042035	DDB1	100	91.404	Macaca_fascicularis
ENSACLG00000012401	ddb1	99	91.424	ENSMMUG00000002691	DDB1	99	91.424	Macaca_mulatta
ENSACLG00000012401	ddb1	100	91.404	ENSMNEG00000031559	DDB1	100	91.404	Macaca_nemestrina
ENSACLG00000012401	ddb1	100	91.404	ENSMLEG00000044136	DDB1	100	91.404	Mandrillus_leucophaeus
ENSACLG00000012401	ddb1	100	99.035	ENSMAMG00000014372	ddb1	100	99.035	Mastacembelus_armatus
ENSACLG00000012401	ddb1	100	99.912	ENSMZEG00005013835	ddb1	100	99.912	Maylandia_zebra
ENSACLG00000012401	ddb1	94	90.317	ENSMGAG00000004990	DDB1	100	90.317	Meleagris_gallopavo
ENSACLG00000012401	ddb1	100	91.491	ENSMAUG00000012926	Ddb1	100	91.491	Mesocricetus_auratus
ENSACLG00000012401	ddb1	100	91.579	ENSMICG00000013703	DDB1	100	91.579	Microcebus_murinus
ENSACLG00000012401	ddb1	100	91.316	ENSMOCG00000020499	Ddb1	100	91.316	Microtus_ochrogaster
ENSACLG00000012401	ddb1	99	98.434	ENSMMOG00000001758	ddb1	99	98.878	Mola_mola
ENSACLG00000012401	ddb1	100	82.612	ENSMODG00000020353	DDB1	100	82.612	Monodelphis_domestica
ENSACLG00000012401	ddb1	100	98.947	ENSMALG00000014071	ddb1	100	98.947	Monopterus_albus
ENSACLG00000012401	ddb1	100	91.491	MGP_CAROLIEiJ_G0022695	Ddb1	100	91.491	Mus_caroli
ENSACLG00000012401	ddb1	100	91.579	ENSMUSG00000024740	Ddb1	100	91.579	Mus_musculus
ENSACLG00000012401	ddb1	100	91.491	MGP_PahariEiJ_G0014189	Ddb1	100	91.491	Mus_pahari
ENSACLG00000012401	ddb1	100	91.579	MGP_SPRETEiJ_G0023609	Ddb1	100	91.579	Mus_spretus
ENSACLG00000012401	ddb1	99	89.709	ENSMPUG00000014200	DDB1	100	88.333	Mustela_putorius_furo
ENSACLG00000012401	ddb1	100	91.579	ENSMLUG00000013232	DDB1	100	91.579	Myotis_lucifugus
ENSACLG00000012401	ddb1	100	91.404	ENSNGAG00000009384	Ddb1	100	91.404	Nannospalax_galili
ENSACLG00000012401	ddb1	100	99.912	ENSNBRG00000019581	ddb1	100	99.912	Neolamprologus_brichardi
ENSACLG00000012401	ddb1	100	88.542	ENSNLEG00000002022	DDB1	100	88.542	Nomascus_leucogenys
ENSACLG00000012401	ddb1	90	93.662	ENSMEUG00000001099	DDB1	93	93.662	Notamacropus_eugenii
ENSACLG00000012401	ddb1	87	86.369	ENSOPRG00000008254	DDB1	90	82.832	Ochotona_princeps
ENSACLG00000012401	ddb1	100	91.491	ENSODEG00000002419	DDB1	100	91.491	Octodon_degus
ENSACLG00000012401	ddb1	100	99.912	ENSONIG00000005804	ddb1	100	99.912	Oreochromis_niloticus
ENSACLG00000012401	ddb1	91	91.279	ENSOANG00000004897	DDB1	100	91.279	Ornithorhynchus_anatinus
ENSACLG00000012401	ddb1	100	91.404	ENSOCUG00000001667	DDB1	100	91.404	Oryctolagus_cuniculus
ENSACLG00000012401	ddb1	99	97.092	ENSORLG00000001399	ddb1	98	97.598	Oryzias_latipes
ENSACLG00000012401	ddb1	99	96.980	ENSORLG00020001277	ddb1	97	96.242	Oryzias_latipes_hni
ENSACLG00000012401	ddb1	99	97.092	ENSORLG00015002080	ddb1	99	97.488	Oryzias_latipes_hsok
ENSACLG00000012401	ddb1	99	97.427	ENSOMEG00000006181	ddb1	99	95.989	Oryzias_melastigma
ENSACLG00000012401	ddb1	100	91.579	ENSOGAG00000016103	DDB1	100	91.579	Otolemur_garnettii
ENSACLG00000012401	ddb1	99	91.630	ENSOARG00000011716	DDB1	98	91.630	Ovis_aries
ENSACLG00000012401	ddb1	100	91.404	ENSPPAG00000035343	DDB1	100	91.404	Pan_paniscus
ENSACLG00000012401	ddb1	100	91.491	ENSPPRG00000013300	DDB1	100	91.491	Panthera_pardus
ENSACLG00000012401	ddb1	98	91.510	ENSPTIG00000006909	DDB1	98	91.510	Panthera_tigris_altaica
ENSACLG00000012401	ddb1	100	91.404	ENSPTRG00000003737	DDB1	100	91.404	Pan_troglodytes
ENSACLG00000012401	ddb1	100	91.404	ENSPANG00000000242	DDB1	100	91.404	Papio_anubis
ENSACLG00000012401	ddb1	99	95.302	ENSPKIG00000019213	ddb1	94	95.993	Paramormyrops_kingsleyae
ENSACLG00000012401	ddb1	98	90.658	ENSPSIG00000013275	DDB1	100	90.658	Pelodiscus_sinensis
ENSACLG00000012401	ddb1	99	97.763	ENSPMGG00000021179	ddb1	99	98.367	Periophthalmus_magnuspinnatus
ENSACLG00000012401	ddb1	100	91.491	ENSPEMG00000012241	Ddb1	100	91.491	Peromyscus_maniculatus_bairdii
ENSACLG00000012401	ddb1	97	84.897	ENSPMAG00000008479	ddb1	100	86.444	Petromyzon_marinus
ENSACLG00000012401	ddb1	100	91.667	ENSPCIG00000002643	DDB1	100	91.667	Phascolarctos_cinereus
ENSACLG00000012401	ddb1	100	97.984	ENSPFOG00000002768	ddb1	100	97.984	Poecilia_formosa
ENSACLG00000012401	ddb1	100	97.807	ENSPLAG00000017227	ddb1	100	97.807	Poecilia_latipinna
ENSACLG00000012401	ddb1	100	97.807	ENSPMEG00000011398	ddb1	100	97.807	Poecilia_mexicana
ENSACLG00000012401	ddb1	99	97.763	ENSPREG00000004440	ddb1	98	98.047	Poecilia_reticulata
ENSACLG00000012401	ddb1	100	87.086	ENSPPYG00000003193	DDB1	100	87.086	Pongo_abelii
ENSACLG00000012401	ddb1	85	89.403	ENSPCAG00000011040	DDB1	85	89.403	Procavia_capensis
ENSACLG00000012401	ddb1	100	90.368	ENSPCOG00000015176	DDB1	100	90.368	Propithecus_coquereli
ENSACLG00000012401	ddb1	100	91.316	ENSPVAG00000003847	DDB1	100	91.316	Pteropus_vampyrus
ENSACLG00000012401	ddb1	99	95.638	ENSPNAG00000006635	ddb1	97	96.365	Pygocentrus_nattereri
ENSACLG00000012401	ddb1	100	91.579	ENSRNOG00000020715	Ddb1	100	91.579	Rattus_norvegicus
ENSACLG00000012401	ddb1	100	91.404	ENSRBIG00000033611	DDB1	100	91.404	Rhinopithecus_bieti
ENSACLG00000012401	ddb1	100	91.404	ENSRROG00000041407	DDB1	100	91.404	Rhinopithecus_roxellana
ENSACLG00000012401	ddb1	100	91.491	ENSSBOG00000019775	DDB1	100	91.491	Saimiri_boliviensis_boliviensis
ENSACLG00000012401	ddb1	94	89.252	ENSSHAG00000011600	DDB1	100	89.252	Sarcophilus_harrisii
ENSACLG00000012401	ddb1	99	95.749	ENSSFOG00015011151	ddb1	97	96.190	Scleropages_formosus
ENSACLG00000012401	ddb1	100	98.421	ENSSMAG00000009495	ddb1	100	98.421	Scophthalmus_maximus
ENSACLG00000012401	ddb1	100	98.860	ENSSDUG00000004642	ddb1	100	98.860	Seriola_dumerili
ENSACLG00000012401	ddb1	100	98.860	ENSSLDG00000015804	ddb1	100	98.860	Seriola_lalandi_dorsalis
ENSACLG00000012401	ddb1	70	94.340	ENSSARG00000003290	-	72	94.340	Sorex_araneus
ENSACLG00000012401	ddb1	100	91.140	ENSSPUG00000019338	DDB1	100	91.140	Sphenodon_punctatus
ENSACLG00000012401	ddb1	99	98.210	ENSSPAG00000009888	ddb1	99	98.512	Stegastes_partitus
ENSACLG00000012401	ddb1	100	90.526	ENSSSCG00000013094	DDB1	100	90.526	Sus_scrofa
ENSACLG00000012401	ddb1	100	90.702	ENSTGUG00000006414	DDB1	100	90.702	Taeniopygia_guttata
ENSACLG00000012401	ddb1	99	96.756	ENSTRUG00000016682	ddb1	98	96.925	Takifugu_rubripes
ENSACLG00000012401	ddb1	88	92.515	ENSTNIG00000009565	ddb1	99	92.515	Tetraodon_nigroviridis
ENSACLG00000012401	ddb1	92	85.770	ENSTTRG00000011055	DDB1	94	85.770	Tursiops_truncatus
ENSACLG00000012401	ddb1	99	90.604	ENSUAMG00000017793	DDB1	93	91.721	Ursus_americanus
ENSACLG00000012401	ddb1	99	90.604	ENSUMAG00000011788	DDB1	98	91.721	Ursus_maritimus
ENSACLG00000012401	ddb1	93	89.568	ENSVPAG00000007963	DDB1	92	86.891	Vicugna_pacos
ENSACLG00000012401	ddb1	100	91.491	ENSVVUG00000004987	DDB1	100	91.491	Vulpes_vulpes
ENSACLG00000012401	ddb1	100	88.636	ENSXETG00000008820	ddb1	100	88.636	Xenopus_tropicalis
ENSACLG00000012401	ddb1	99	97.539	ENSXCOG00000013956	ddb1	99	98.163	Xiphophorus_couchianus
ENSACLG00000012401	ddb1	99	97.539	ENSXMAG00000000022	ddb1	99	97.950	Xiphophorus_maculatus