EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000012407 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2313 bases
Position: chr7:6497263-6499575
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000018143	RVT_1	PF00078.27	1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000018575	-	2313	-	ENSACLP00000018143	770 (aa)	-	-

Gene Model

Click here to download ENSACLG00000012407's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000012407's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000012407	-	90	94.084	ENSACLG00000019987	-	94	93.506
ENSACLG00000012407	-	56	97.669	ENSACLG00000013208	-	56	97.669
ENSACLG00000012407	-	60	93.682	ENSACLG00000000593	-	53	93.682
ENSACLG00000012407	-	58	97.778	ENSACLG00000017252	-	57	97.778
ENSACLG00000012407	-	51	95.385	ENSACLG00000020753	-	100	95.385

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000012407	-	92	77.872	ENSATEG00000009245	-	98	77.305	Anabas_testudineus
ENSACLG00000012407	-	92	77.215	ENSATEG00000009442	-	93	76.653	Anabas_testudineus
ENSACLG00000012407	-	65	72.600	ENSCSEG00000006806	-	100	72.200	Cynoglossus_semilaevis
ENSACLG00000012407	-	57	71.689	ENSCSEG00000011094	-	100	71.233	Cynoglossus_semilaevis
ENSACLG00000012407	-	82	32.116	ENSIPUG00000019854	-	64	31.651	Ictalurus_punctatus
ENSACLG00000012407	-	83	72.484	ENSORLG00000030105	-	100	72.013	Oryzias_latipes
ENSACLG00000012407	-	58	74.944	ENSORLG00020014723	-	91	73.846	Oryzias_latipes_hni
ENSACLG00000012407	-	54	69.712	ENSORLG00020017634	-	100	68.990	Oryzias_latipes_hni
ENSACLG00000012407	-	60	71.429	ENSORLG00015016018	-	100	70.779	Oryzias_latipes_hsok
ENSACLG00000012407	-	76	33.225	ENSORLG00015014894	-	99	32.897	Oryzias_latipes_hsok
ENSACLG00000012407	-	71	72.313	ENSORLG00015015479	-	100	71.767	Oryzias_latipes_hsok
ENSACLG00000012407	-	55	70.423	ENSORLG00015017396	-	100	69.718	Oryzias_latipes_hsok
ENSACLG00000012407	-	65	72.435	ENSORLG00015021587	-	96	71.831	Oryzias_latipes_hsok
ENSACLG00000012407	-	95	74.180	ENSOMEG00000002451	-	97	73.770	Oryzias_melastigma
ENSACLG00000012407	-	90	76.724	ENSPREG00000008362	-	90	76.293	Poecilia_reticulata
ENSACLG00000012407	-	90	77.778	ENSPREG00000023202	-	80	77.345	Poecilia_reticulata
ENSACLG00000012407	-	55	73.536	ENSSFOG00015006802	-	100	72.834	Scleropages_formosus