EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000012751 (Gene tree)
Gene ID: 113022784
Gene Symbol: -
Alias: -
Full Name: zinc finger matrin-type protein 1-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 8018 bases
Position: chr5:27034913-27042930
Accession: 113022784
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000018690	zf-met	PF12874.7	2.4e-22	1	4
ENSACLP00000018690	zf-met	PF12874.7	2.4e-22	2	4
ENSACLP00000018690	zf-met	PF12874.7	2.4e-22	3	4
ENSACLP00000018690	zf-met	PF12874.7	2.4e-22	4	4
ENSACLP00000018690	zf-C2H2_jaz	PF12171.8	4.7e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000019130	-	4070	-	ENSACLP00000018690	599 (aa)	XP_026024370	UPI000C243A47

Gene Model

Click here to download ENSACLG00000012751's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000012751's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000012751	-	88	65.989	ENSAPOG00000002875	-	100	65.804	Acanthochromis_polyacanthus
ENSACLG00000012751	-	100	67.377	ENSAOCG00000007093	-	100	67.541	Amphiprion_ocellaris
ENSACLG00000012751	-	100	61.412	ENSATEG00000023589	-	100	60.591	Anabas_testudineus
ENSACLG00000012751	-	86	45.489	ENSCVAG00000018034	-	97	42.992	Cyprinodon_variegatus
ENSACLG00000012751	-	55	51.613	ENSELUG00000010589	-	91	43.409	Esox_lucius
ENSACLG00000012751	-	81	53.157	ENSGACG00000009018	-	100	52.314	Gasterosteus_aculeatus
ENSACLG00000012751	-	100	98.500	ENSHBUG00000020963	-	100	98.500	Haplochromis_burtoni
ENSACLG00000012751	-	85	47.025	ENSHCOG00000013075	-	100	45.681	Hippocampus_comes
ENSACLG00000012751	-	66	44.146	ENSIPUG00000011933	-	98	40.864	Ictalurus_punctatus
ENSACLG00000012751	-	100	60.000	ENSLBEG00000027221	-	99	59.677	Labrus_bergylta
ENSACLG00000012751	-	100	99.833	ENSMZEG00005026847	-	100	99.833	Maylandia_zebra
ENSACLG00000012751	-	86	58.206	ENSMMOG00000012396	-	96	58.588	Mola_mola
ENSACLG00000012751	-	83	59.921	ENSMALG00000002560	-	99	62.083	Monopterus_albus
ENSACLG00000012751	-	52	54.403	ENSPNAG00000006731	-	64	47.268	Pygocentrus_nattereri
ENSACLG00000012751	-	86	57.576	ENSSMAG00000009994	-	98	56.203	Scophthalmus_maximus
ENSACLG00000012751	-	100	61.626	ENSSDUG00000022406	-	100	64.715	Seriola_dumerili
ENSACLG00000012751	-	52	68.671	ENSSPAG00000018876	-	99	66.929	Stegastes_partitus