EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000013004 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 2019 bases
Position: chrLS419797.1:602690-604708
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000019122	FDF	PF09532.10	1.1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000019565	-	849	-	ENSACLP00000019122	282 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013004's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013004's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000013004	-	62	97.126	ENSACLG00000019624	-	61	97.126
ENSACLG00000013004	-	62	78.736	ENSACLG00000008384	-	57	83.908
ENSACLG00000013004	-	62	93.678	ENSACLG00000011955	-	60	93.678
ENSACLG00000013004	-	100	90.411	ENSACLG00000027552	-	97	91.438

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013004	-	69	37.615	ENSCCAG00000024900	-	59	46.591	Cebus_capucinus
ENSACLG00000013004	-	51	47.059	ENSCGRG00000002484	-	79	47.159	Cricetulus_griseus_crigri
ENSACLG00000013004	-	70	38.596	ENSFDAG00000002214	LSM14B	82	39.370	Fukomys_damarensis
ENSACLG00000013004	-	55	60.510	ENSGAFG00000013723	LSM14B	72	60.510	Gambusia_affinis
ENSACLG00000013004	-	53	62.092	ENSKMAG00000012834	-	69	62.893	Kryptolebias_marmoratus
ENSACLG00000013004	-	76	36.170	ENSLACG00000003849	LSM14B	57	37.255	Latimeria_chalumnae
ENSACLG00000013004	-	62	80.460	ENSMZEG00005026087	-	58	84.483	Maylandia_zebra
ENSACLG00000013004	-	100	89.041	ENSMZEG00005009676	-	97	90.068	Maylandia_zebra
ENSACLG00000013004	-	62	81.034	ENSMZEG00005002688	-	58	85.057	Maylandia_zebra
ENSACLG00000013004	-	50	50.000	ENSMODG00000016690	LSM14B	53	50.909	Monodelphis_domestica
ENSACLG00000013004	-	50	53.846	ENSSPAG00000018854	-	53	53.846	Stegastes_partitus
ENSACLG00000013004	-	70	34.615	ENSSSCG00000026052	LSM14B	82	38.800	Sus_scrofa
ENSACLG00000013004	-	52	49.057	ENSTGUG00000007884	LSM14B	50	48.876	Taeniopygia_guttata