EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000013071 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Plus strand
Length: 24197 bases
Position: chr16:20649088-20673284
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000019608	MBD	PF01429.19	1.5e-17	1	1
ENSACLP00000019615	MBD	PF01429.19	1.9e-15	1	1
ENSACLP00000019592	MBD	PF01429.19	2e-15	1	1
ENSACLP00000019595	MBD	PF01429.19	1.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000020074	-	3126	-	ENSACLP00000019615	1041 (aa)	-	-
ENSACLT00000020051	-	3387	-	ENSACLP00000019592	1128 (aa)	-	-
ENSACLT00000020067	-	3171	-	ENSACLP00000019608	1056 (aa)	-	-
ENSACLT00000020054	-	3285	-	ENSACLP00000019595	1094 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013071's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013071's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013071	-	79	69.022	ENSG00000123636	BAZ2B	99	67.143	Homo_sapiens
ENSACLG00000013071	-	95	79.965	ENSAPOG00000024386	-	98	80.067	Acanthochromis_polyacanthus
ENSACLG00000013071	-	90	78.826	ENSACIG00000021572	-	93	78.833	Amphilophus_citrinellus
ENSACLG00000013071	-	95	81.879	ENSAOCG00000014347	BAZ2B	97	79.167	Amphiprion_ocellaris
ENSACLG00000013071	-	90	82.727	ENSAPEG00000017792	-	98	79.766	Amphiprion_percula
ENSACLG00000013071	-	80	68.953	ENSANAG00000031484	BAZ2B	71	66.722	Aotus_nancymaae
ENSACLG00000013071	-	87	65.964	ENSBTAG00000020654	BAZ2B	76	57.875	Bos_taurus
ENSACLG00000013071	-	79	68.953	ENSCJAG00000015052	BAZ2B	50	53.403	Callithrix_jacchus
ENSACLG00000013071	-	78	67.365	ENSCAFG00000009433	BAZ2B	51	53.143	Canis_familiaris
ENSACLG00000013071	-	78	61.431	ENSCAFG00020006307	BAZ2B	53	49.714	Canis_lupus_dingo
ENSACLG00000013071	-	85	65.329	ENSCHIG00000022217	-	75	59.322	Capra_hircus
ENSACLG00000013071	-	70	67.908	ENSCPBG00000026480	BAZ2B	53	51.469	Chrysemys_picta_bellii
ENSACLG00000013071	-	66	57.203	ENSCSEG00000000800	baz2ba	70	55.925	Cynoglossus_semilaevis
ENSACLG00000013071	-	91	53.713	ENSDARG00000057782	baz2ba	79	53.913	Danio_rerio
ENSACLG00000013071	-	80	48.812	ENSELUG00000000860	baz2ba	58	49.722	Esox_lucius
ENSACLG00000013071	-	90	64.516	ENSELUG00000019239	BAZ2B	51	63.695	Esox_lucius
ENSACLG00000013071	-	55	51.911	ENSFHEG00000022500	-	52	70.428	Fundulus_heteroclitus
ENSACLG00000013071	-	83	53.521	ENSLACG00000002050	BAZ2B	51	53.675	Latimeria_chalumnae
ENSACLG00000013071	-	66	65.640	ENSLOCG00000006024	baz2ba	51	54.988	Lepisosteus_oculatus
ENSACLG00000013071	-	79	68.773	ENSMFAG00000037367	BAZ2B	76	58.653	Macaca_fascicularis
ENSACLG00000013071	-	79	67.673	ENSMMUG00000006182	BAZ2B	53	50.000	Macaca_mulatta
ENSACLG00000013071	-	100	99.811	ENSMZEG00005007380	-	100	99.811	Maylandia_zebra
ENSACLG00000013071	-	84	66.010	ENSMICG00000013967	BAZ2B	76	60.392	Microcebus_murinus
ENSACLG00000013071	-	79	69.022	ENSNLEG00000001067	BAZ2B	72	59.085	Nomascus_leucogenys
ENSACLG00000013071	-	74	67.365	ENSOANG00000006146	BAZ2B	50	52.489	Ornithorhynchus_anatinus
ENSACLG00000013071	-	95	65.058	ENSORLG00000016789	BAZ2B	50	53.433	Oryzias_latipes
ENSACLG00000013071	-	74	52.816	ENSORLG00020022332	BAZ2B	51	53.273	Oryzias_latipes_hni
ENSACLG00000013071	-	79	69.022	ENSPPAG00000043827	BAZ2B	68	62.230	Pan_paniscus
ENSACLG00000013071	-	80	68.582	ENSPTRG00000012563	BAZ2B	77	58.693	Pan_troglodytes
ENSACLG00000013071	-	79	68.773	ENSPANG00000009095	BAZ2B	50	54.079	Papio_anubis
ENSACLG00000013071	-	88	56.331	ENSPMGG00000006880	baz2ba	87	44.072	Periophthalmus_magnuspinnatus
ENSACLG00000013071	-	82	54.558	ENSPCIG00000003070	BAZ2B	76	46.336	Phascolarctos_cinereus
ENSACLG00000013071	-	74	56.944	ENSPFOG00000015860	-	59	36.900	Poecilia_formosa
ENSACLG00000013071	-	62	60.984	ENSPLAG00000014786	baz2ba	54	59.563	Poecilia_latipinna
ENSACLG00000013071	-	100	96.247	ENSPNYG00000002561	-	100	96.247	Pundamilia_nyererei
ENSACLG00000013071	-	79	68.953	ENSSBOG00000028235	BAZ2B	77	60.079	Saimiri_boliviensis_boliviensis
ENSACLG00000013071	-	94	79.863	ENSSMAG00000011920	BAZ2B	93	62.500	Scophthalmus_maximus
ENSACLG00000013071	-	71	74.411	ENSSDUG00000018735	-	88	66.552	Seriola_dumerili
ENSACLG00000013071	-	86	62.676	ENSSLDG00000016625	-	87	68.223	Seriola_lalandi_dorsalis
ENSACLG00000013071	-	65	66.143	ENSUAMG00000024238	BAZ2B	54	51.462	Ursus_americanus
ENSACLG00000013071	-	70	64.081	ENSXETG00000007584	baz2b	64	45.359	Xenopus_tropicalis