EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000013170 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 12464 bases
Position: chr3:21294172-21306635
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000019364	PARP	PF00644.20	9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000019809	-	648	-	ENSACLP00000019364	215 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013170's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013170's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000013170	-	90	43.939	ENSACLG00000005418	-	56	45.856
ENSACLG00000013170	-	90	33.962	ENSACLG00000023893	-	85	33.962
ENSACLG00000013170	-	90	90.863	ENSACLG00000013093	-	60	90.863
ENSACLG00000013170	-	90	31.455	ENSACLG00000023902	PARP11	61	31.455
ENSACLG00000013170	-	90	41.414	ENSACLG00000005600	-	57	41.414
ENSACLG00000013170	-	90	33.028	ENSACLG00000023809	PARP11	90	33.028
ENSACLG00000013170	-	90	43.147	ENSACLG00000005627	-	50	43.147

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013170	-	72	76.774	ENSAPOG00000007412	-	57	76.774	Acanthochromis_polyacanthus
ENSACLG00000013170	-	90	78.173	ENSACIG00000009927	-	96	78.173	Amphilophus_citrinellus
ENSACLG00000013170	-	90	46.465	ENSACIG00000003944	si:ch211-219a4.3	52	46.465	Amphilophus_citrinellus
ENSACLG00000013170	-	90	79.695	ENSACIG00000009912	-	62	79.695	Amphilophus_citrinellus
ENSACLG00000013170	-	90	46.193	ENSACIG00000020176	-	70	46.193	Amphilophus_citrinellus
ENSACLG00000013170	-	85	65.591	ENSAOCG00000002980	-	60	65.591	Amphiprion_ocellaris
ENSACLG00000013170	-	90	44.444	ENSCSEG00000017936	si:ch211-219a4.3	52	44.444	Cynoglossus_semilaevis
ENSACLG00000013170	-	88	51.813	ENSCSEG00000020071	-	55	51.813	Cynoglossus_semilaevis
ENSACLG00000013170	-	90	77.320	ENSCVAG00000014329	-	61	77.320	Cyprinodon_variegatus
ENSACLG00000013170	-	90	44.388	ENSCVAG00000017520	-	82	44.388	Cyprinodon_variegatus
ENSACLG00000013170	-	90	63.265	ENSFHEG00000008820	-	85	63.265	Fundulus_heteroclitus
ENSACLG00000013170	-	91	39.904	ENSGMOG00000011231	-	62	39.904	Gadus_morhua
ENSACLG00000013170	-	90	43.878	ENSGAFG00000001814	-	51	43.878	Gambusia_affinis
ENSACLG00000013170	-	90	70.558	ENSGAFG00000002533	-	63	70.558	Gambusia_affinis
ENSACLG00000013170	-	90	45.455	ENSHBUG00000005369	-	57	45.455	Haplochromis_burtoni
ENSACLG00000013170	-	85	76.216	ENSKMAG00000012870	-	56	76.216	Kryptolebias_marmoratus
ENSACLG00000013170	-	85	75.135	ENSKMAG00000003908	-	60	75.135	Kryptolebias_marmoratus
ENSACLG00000013170	-	89	41.026	ENSLACG00000009107	-	95	41.026	Latimeria_chalumnae
ENSACLG00000013170	-	90	63.776	ENSMZEG00005026601	-	68	63.776	Maylandia_zebra
ENSACLG00000013170	-	90	46.465	ENSMZEG00005025678	si:ch211-219a4.3	56	46.465	Maylandia_zebra
ENSACLG00000013170	-	90	36.275	ENSMODG00000007157	-	62	36.275	Monodelphis_domestica
ENSACLG00000013170	-	78	67.665	ENSMALG00000017146	-	82	67.665	Monopterus_albus
ENSACLG00000013170	-	80	67.630	ENSMALG00000000434	-	86	67.630	Monopterus_albus
ENSACLG00000013170	-	99	77.674	ENSNBRG00000004017	-	100	77.674	Neolamprologus_brichardi
ENSACLG00000013170	-	91	77.387	ENSNBRG00000003877	-	68	77.387	Neolamprologus_brichardi
ENSACLG00000013170	-	87	90.957	ENSNBRG00000004048	-	100	90.957	Neolamprologus_brichardi
ENSACLG00000013170	-	90	73.604	ENSORLG00015003387	-	58	73.604	Oryzias_latipes_hsok
ENSACLG00000013170	-	90	45.960	ENSORLG00015021971	si:ch211-219a4.3	55	45.960	Oryzias_latipes_hsok
ENSACLG00000013170	-	90	73.096	ENSOMEG00000016395	-	62	73.096	Oryzias_melastigma
ENSACLG00000013170	-	90	65.306	ENSOMEG00000016408	-	59	65.306	Oryzias_melastigma
ENSACLG00000013170	-	90	72.081	ENSOMEG00000016380	-	58	72.081	Oryzias_melastigma
ENSACLG00000013170	-	90	45.178	ENSOMEG00000019715	si:ch211-219a4.3	56	45.178	Oryzias_melastigma
ENSACLG00000013170	-	81	71.186	ENSOMEG00000016369	-	55	71.186	Oryzias_melastigma
ENSACLG00000013170	-	90	45.178	ENSPKIG00000004135	-	55	45.178	Paramormyrops_kingsleyae
ENSACLG00000013170	-	90	44.388	ENSPMGG00000004482	-	51	43.147	Periophthalmus_magnuspinnatus
ENSACLG00000013170	-	90	60.000	ENSPMGG00000017987	-	90	60.000	Periophthalmus_magnuspinnatus
ENSACLG00000013170	-	90	46.193	ENSPFOG00000021893	-	51	46.193	Poecilia_formosa
ENSACLG00000013170	-	85	71.892	ENSPLAG00000004362	-	67	71.892	Poecilia_latipinna
ENSACLG00000013170	-	90	43.367	ENSPLAG00000023515	-	69	43.367	Poecilia_latipinna
ENSACLG00000013170	-	90	43.878	ENSPMEG00000004356	-	69	43.878	Poecilia_mexicana
ENSACLG00000013170	-	90	69.543	ENSPREG00000003560	-	61	69.543	Poecilia_reticulata
ENSACLG00000013170	-	90	44.388	ENSPREG00000007470	-	95	43.005	Poecilia_reticulata
ENSACLG00000013170	-	84	46.154	ENSPNYG00000001714	-	52	46.154	Pundamilia_nyererei
ENSACLG00000013170	-	91	93.467	ENSPNYG00000021303	-	62	93.467	Pundamilia_nyererei
ENSACLG00000013170	-	90	46.734	ENSPNYG00000013937	-	56	45.960	Pundamilia_nyererei
ENSACLG00000013170	-	90	63.776	ENSPNYG00000021378	-	60	63.776	Pundamilia_nyererei
ENSACLG00000013170	-	90	47.716	ENSSFOG00015001605	-	67	47.716	Scleropages_formosus
ENSACLG00000013170	-	90	77.665	ENSSLDG00000005960	-	54	77.665	Seriola_lalandi_dorsalis
ENSACLG00000013170	-	90	42.640	ENSTRUG00000004579	-	56	42.640	Takifugu_rubripes
ENSACLG00000013170	-	90	45.178	ENSUAMG00000004120	-	51	45.178	Ursus_americanus
ENSACLG00000013170	-	94	42.584	ENSXETG00000010161	parp14.3	68	42.584	Xenopus_tropicalis
ENSACLG00000013170	-	90	46.193	ENSXCOG00000014707	-	55	46.193	Xiphophorus_couchianus
ENSACLG00000013170	-	72	48.387	ENSXCOG00000014714	-	71	48.387	Xiphophorus_couchianus
ENSACLG00000013170	-	87	66.667	ENSXMAG00000010352	-	81	66.667	Xiphophorus_maculatus