EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSACLG00000013296 (Gene tree)
Gene ID
113012829
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1%2C RNA-binding
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Minus strand
Length
12434 bases
Position
chr20:19933586-19946019
Accession
ZDB-GENE-030131-8623
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000019566CSDPF00313.224.2e-8315
ENSACLP00000019566CSDPF00313.224.2e-8325
ENSACLP00000019566CSDPF00313.224.2e-8335
ENSACLP00000019566CSDPF00313.224.2e-8345
ENSACLP00000019566CSDPF00313.224.2e-8355
ENSACLP00000019557CSDPF00313.226.3e-8315
ENSACLP00000019557CSDPF00313.226.3e-8325
ENSACLP00000019557CSDPF00313.226.3e-8335
ENSACLP00000019557CSDPF00313.226.3e-8345
ENSACLP00000019557CSDPF00313.226.3e-8355
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000020008-3102-ENSACLP00000019557798 (aa)--
ENSACLT00000020022-2310-ENSACLP00000019566769 (aa)--
Gene Model
Click here to download ENSACLG00000013296's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013296's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000013296csde110077.373ENSG00000009307CSDE110085.294Homo_sapiens
ENSACLG00000013296csde110093.628ENSAPOG00000015538csde110093.628Acanthochromis_polyacanthus
ENSACLG00000013296csde110076.593ENSAMEG00000017129CSDE19476.593Ailuropoda_melanoleuca
ENSACLG00000013296csde19095.676ENSACIG00000015175csde110095.676Amphilophus_citrinellus
ENSACLG00000013296csde110093.368ENSAOCG00000011510csde110093.368Amphiprion_ocellaris
ENSACLG00000013296csde110093.734ENSAPEG00000007194csde110093.498Amphiprion_percula
ENSACLG00000013296csde110092.718ENSATEG00000003864csde110092.718Anabas_testudineus
ENSACLG00000013296csde110079.454ENSAPLG00000008797CSDE110079.064Anas_platyrhynchos
ENSACLG00000013296csde110079.125ENSACAG00000003120CSDE110079.125Anolis_carolinensis
ENSACLG00000013296csde19361.433ENSANAG00000028396-9362.500Aotus_nancymaae
ENSACLG00000013296csde110077.243ENSANAG00000024665CSDE19577.627Aotus_nancymaae
ENSACLG00000013296csde110085.084ENSAMXG00000007436csde110084.565Astyanax_mexicanus
ENSACLG00000013296csde110077.113ENSBTAG00000000678CSDE110077.113Bos_taurus
ENSACLG00000013296csde110077.243ENSCJAG00000012565CSDE19576.875Callithrix_jacchus
ENSACLG00000013296csde19877.822ENSCAFG00000009618CSDE19477.822Canis_familiaris
ENSACLG00000013296csde110077.633ENSCAFG00020000481CSDE110077.633Canis_lupus_dingo
ENSACLG00000013296csde110077.113ENSCHIG00000017250CSDE110077.113Capra_hircus
ENSACLG00000013296csde110077.373ENSTSYG00000003747CSDE110077.373Carlito_syrichta
ENSACLG00000013296csde110076.687ENSCAPG00000015128CSDE110076.687Cavia_aperea
ENSACLG00000013296csde110073.308ENSCPOG00000040388CSDE110073.308Cavia_porcellus
ENSACLG00000013296csde110077.243ENSCCAG00000036794CSDE110076.875Cebus_capucinus
ENSACLG00000013296csde19556.872ENSCCAG00000033677-9955.924Cebus_capucinus
ENSACLG00000013296csde19755.111ENSCCAG00000030878-9154.889Cebus_capucinus
ENSACLG00000013296csde110077.373ENSCATG00000036962CSDE19777.373Cercocebus_atys
ENSACLG00000013296csde110077.503ENSCLAG00000006618CSDE110077.503Chinchilla_lanigera
ENSACLG00000013296csde110077.000ENSCSAG00000001658CSDE19577.000Chlorocebus_sabaeus
ENSACLG00000013296csde110082.524ENSCHOG00000000918CSDE18582.524Choloepus_hoffmanni
ENSACLG00000013296csde110079.584ENSCPBG00000016547CSDE110079.194Chrysemys_picta_bellii
ENSACLG00000013296csde19843.436ENSCING00000014465-9643.190Ciona_intestinalis
ENSACLG00000013296csde19742.543ENSCSAVG00000008100-10041.366Ciona_savignyi
ENSACLG00000013296csde19079.699ENSCANG00000031069-9479.259Colobus_angolensis_palliatus
ENSACLG00000013296csde110077.373ENSCANG00000035096CSDE19777.373Colobus_angolensis_palliatus
ENSACLG00000013296csde110076.723ENSCGRG00001016833-10076.723Cricetulus_griseus_chok1gshd
ENSACLG00000013296csde110063.069ENSCGRG00001014011-10063.069Cricetulus_griseus_chok1gshd
ENSACLG00000013296csde19773.111ENSCGRG00000002225-10073.111Cricetulus_griseus_crigri
ENSACLG00000013296csde110073.913ENSCGRG00000005831-10073.913Cricetulus_griseus_crigri
ENSACLG00000013296csde110091.157ENSCSEG00000002620csde110091.157Cynoglossus_semilaevis
ENSACLG00000013296csde110091.678ENSCVAG00000001344csde110091.678Cyprinodon_variegatus
ENSACLG00000013296csde110085.607ENSDARG00000074758csde110085.607Danio_rerio
ENSACLG00000013296csde110077.792ENSDNOG00000010287-9377.792Dasypus_novemcinctus
ENSACLG00000013296csde16250.951ENSDNOG00000034464-9964.762Dasypus_novemcinctus
ENSACLG00000013296csde110076.625ENSDORG00000011609Csde110076.625Dipodomys_ordii
ENSACLG00000013296csde19749.284FBgn0263352Unr8048.406Drosophila_melanogaster
ENSACLG00000013296csde17953.465ENSETEG00000007109-9953.465Echinops_telfairi
ENSACLG00000013296csde19068.671ENSETEG00000006280-9968.671Echinops_telfairi
ENSACLG00000013296csde19960.156ENSETEG00000013678-9960.156Echinops_telfairi
ENSACLG00000013296csde19371.470ENSETEG00000002491-8271.470Echinops_telfairi
ENSACLG00000013296csde19954.926ENSEBUG00000008647csde19953.222Eptatretus_burgeri
ENSACLG00000013296csde110077.763ENSEASG00005006284CSDE110077.375Equus_asinus_asinus
ENSACLG00000013296csde110077.763ENSECAG00000020885CSDE110077.375Equus_caballus
ENSACLG00000013296csde19381.562ENSEEUG00000006286CSDE16881.562Erinaceus_europaeus
ENSACLG00000013296csde110085.511ENSELUG00000015507csde110084.864Esox_lucius
ENSACLG00000013296csde110077.633ENSFCAG00000029266CSDE110077.633Felis_catus
ENSACLG00000013296csde110078.500ENSFALG00000003407CSDE110078.500Ficedula_albicollis
ENSACLG00000013296csde110076.500ENSFDAG00000007882CSDE110076.500Fukomys_damarensis
ENSACLG00000013296csde110091.729ENSFHEG00000010799csde110091.729Fundulus_heteroclitus
ENSACLG00000013296csde19988.471ENSGMOG00000012731csde110088.471Gadus_morhua
ENSACLG00000013296csde19878.981ENSGALG00000002139CSDE19878.981Gallus_gallus
ENSACLG00000013296csde19492.214ENSGAFG00000005241csde19592.214Gambusia_affinis
ENSACLG00000013296csde19992.095ENSGACG00000004544csde110092.095Gasterosteus_aculeatus
ENSACLG00000013296csde110079.454ENSGAGG00000017685CSDE110079.000Gopherus_agassizii
ENSACLG00000013296csde110077.373ENSGGOG00000002164CSDE110077.373Gorilla_gorilla
ENSACLG00000013296csde1100100.000ENSHBUG00000020315csde1100100.000Haplochromis_burtoni
ENSACLG00000013296csde110069.571ENSHGLG00000003829-10069.571Heterocephalus_glaber_female
ENSACLG00000013296csde110070.351ENSHGLG00000009620-10070.741Heterocephalus_glaber_female
ENSACLG00000013296csde19966.841ENSHGLG00000007471-9866.841Heterocephalus_glaber_female
ENSACLG00000013296csde19962.328ENSHGLG00000000650-9962.328Heterocephalus_glaber_female
ENSACLG00000013296csde19666.000ENSHGLG00000010039-10066.000Heterocephalus_glaber_female
ENSACLG00000013296csde19967.568ENSHGLG00000008555-10067.463Heterocephalus_glaber_female
ENSACLG00000013296csde110064.912ENSHGLG00000019549-10064.662Heterocephalus_glaber_female
ENSACLG00000013296csde19965.531ENSHGLG00100007287-9865.531Heterocephalus_glaber_male
ENSACLG00000013296csde19665.778ENSHGLG00100006910-10065.778Heterocephalus_glaber_male
ENSACLG00000013296csde19760.444ENSHGLG00100004833-10060.444Heterocephalus_glaber_male
ENSACLG00000013296csde19365.229ENSHGLG00100004195-10064.951Heterocephalus_glaber_male
ENSACLG00000013296csde110077.113ENSHGLG00100019438-10077.113Heterocephalus_glaber_male
ENSACLG00000013296csde110063.636ENSHGLG00100001846-10063.377Heterocephalus_glaber_male
ENSACLG00000013296csde19965.543ENSHGLG00100002245-9965.543Heterocephalus_glaber_male
ENSACLG00000013296csde110065.150ENSHGLG00100012072-10065.150Heterocephalus_glaber_male
ENSACLG00000013296csde110090.977ENSHCOG00000004158csde110090.897Hippocampus_comes
ENSACLG00000013296csde110084.565ENSIPUG00000000355csde110083.917Ictalurus_punctatus
ENSACLG00000013296csde110063.520ENSSTOG00000030994-10063.393Ictidomys_tridecemlineatus
ENSACLG00000013296csde19065.503ENSSTOG00000032722-9865.637Ictidomys_tridecemlineatus
ENSACLG00000013296csde110076.625ENSJJAG00000019571Csde110076.625Jaculus_jaculus
ENSACLG00000013296csde110091.771ENSKMAG00000005685csde110091.315Kryptolebias_marmoratus
ENSACLG00000013296csde110092.588ENSLBEG00000014770csde110092.588Labrus_bergylta
ENSACLG00000013296csde110076.173ENSLACG00000018452CSDE19476.173Latimeria_chalumnae
ENSACLG00000013296csde110085.338ENSLOCG00000010413csde19485.338Lepisosteus_oculatus
ENSACLG00000013296csde110077.243ENSLAFG00000007150CSDE19677.243Loxodonta_africana
ENSACLG00000013296csde110077.373ENSMFAG00000003674CSDE110077.373Macaca_fascicularis
ENSACLG00000013296csde110077.373ENSMMUG00000001974CSDE110077.373Macaca_mulatta
ENSACLG00000013296csde110077.373ENSMNEG00000045247CSDE19777.373Macaca_nemestrina
ENSACLG00000013296csde110077.113ENSMLEG00000038673CSDE19576.750Mandrillus_leucophaeus
ENSACLG00000013296csde110093.628ENSMAMG00000008821csde110093.628Mastacembelus_armatus
ENSACLG00000013296csde1100100.000ENSMZEG00005021675csde1100100.000Maylandia_zebra
ENSACLG00000013296csde110079.351ENSMGAG00000016381CSDE110078.961Meleagris_gallopavo
ENSACLG00000013296csde110076.375ENSMAUG00000014031Csde110076.375Mesocricetus_auratus
ENSACLG00000013296csde110077.503ENSMICG00000002050CSDE19677.445Microcebus_murinus
ENSACLG00000013296csde110076.723ENSMOCG00000018960Csde110076.723Microtus_ochrogaster
ENSACLG00000013296csde110093.238ENSMMOG00000015075csde110093.238Mola_mola
ENSACLG00000013296csde110078.125ENSMODG00000004685CSDE110078.125Monodelphis_domestica
ENSACLG00000013296csde110093.238ENSMALG00000007132csde110093.238Monopterus_albus
ENSACLG00000013296csde110076.853MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSACLG00000013296csde110076.853ENSMUSG00000068823Csde110084.106Mus_musculus
ENSACLG00000013296csde110076.853MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSACLG00000013296csde110076.853MGP_SPRETEiJ_G0026394Csde110084.106Mus_spretus
ENSACLG00000013296csde19877.423ENSMPUG00000005753CSDE19977.423Mustela_putorius_furo
ENSACLG00000013296csde110077.113ENSMLUG00000005681CSDE19477.113Myotis_lucifugus
ENSACLG00000013296csde110076.250ENSNGAG00000021929Csde110076.250Nannospalax_galili
ENSACLG00000013296csde19752.000ENSNGAG00000012599-10052.000Nannospalax_galili
ENSACLG00000013296csde1100100.000ENSNBRG00000020808csde1100100.000Neolamprologus_brichardi
ENSACLG00000013296csde110077.373ENSNLEG00000004842CSDE19777.373Nomascus_leucogenys
ENSACLG00000013296csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSACLG00000013296csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSACLG00000013296csde19752.097ENSODEG00000005979-9852.097Octodon_degus
ENSACLG00000013296csde110076.375ENSODEG00000007383-10076.375Octodon_degus
ENSACLG00000013296csde110097.430ENSONIG00000009309csde110097.430Oreochromis_niloticus
ENSACLG00000013296csde110081.356ENSOANG00000003346-8281.356Ornithorhynchus_anatinus
ENSACLG00000013296csde110076.983ENSOCUG00000016438CSDE19576.625Oryctolagus_cuniculus
ENSACLG00000013296csde110091.678ENSORLG00000000707csde110091.678Oryzias_latipes
ENSACLG00000013296csde110091.855ENSORLG00020005148csde110089.718Oryzias_latipes_hni
ENSACLG00000013296csde110091.729ENSORLG00015019415csde110091.547Oryzias_latipes_hsok
ENSACLG00000013296csde110090.977ENSOMEG00000015656csde110091.678Oryzias_melastigma
ENSACLG00000013296csde110077.503ENSOGAG00000012127CSDE19477.503Otolemur_garnettii
ENSACLG00000013296csde110077.113ENSOARG00000020034CSDE19477.113Ovis_aries
ENSACLG00000013296csde110077.373ENSPPAG00000025861CSDE110077.373Pan_paniscus
ENSACLG00000013296csde110077.633ENSPPRG00000006747CSDE19577.250Panthera_pardus
ENSACLG00000013296csde110077.633ENSPTIG00000015468CSDE110077.250Panthera_tigris_altaica
ENSACLG00000013296csde110077.373ENSPTRG00000033721CSDE110077.000Pan_troglodytes
ENSACLG00000013296csde110077.373ENSPANG00000018873CSDE110077.373Papio_anubis
ENSACLG00000013296csde110084.785ENSPKIG00000009459csde110084.785Paramormyrops_kingsleyae
ENSACLG00000013296csde19681.678ENSPSIG00000003823CSDE19681.015Pelodiscus_sinensis
ENSACLG00000013296csde110090.260ENSPMGG00000000772csde110089.610Periophthalmus_magnuspinnatus
ENSACLG00000013296csde110076.625ENSPEMG00000020357-10076.625Peromyscus_maniculatus_bairdii
ENSACLG00000013296csde110078.250ENSPCIG00000022587CSDE110078.250Phascolarctos_cinereus
ENSACLG00000013296csde19789.736ENSPFOG00000012664csde110090.202Poecilia_formosa
ENSACLG00000013296csde19584.946ENSPLAG00000017680csde19384.946Poecilia_latipinna
ENSACLG00000013296csde19585.253ENSPMEG00000005094csde19585.253Poecilia_mexicana
ENSACLG00000013296csde110091.272ENSPREG00000011631csde110088.434Poecilia_reticulata
ENSACLG00000013296csde110076.875ENSPPYG00000000996CSDE110076.875Pongo_abelii
ENSACLG00000013296csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSACLG00000013296csde110077.633ENSPCOG00000017893CSDE110077.633Propithecus_coquereli
ENSACLG00000013296csde19070.260ENSPCOG00000008223-9270.260Propithecus_coquereli
ENSACLG00000013296csde110072.172ENSPVAG00000008225CSDE19572.172Pteropus_vampyrus
ENSACLG00000013296csde1100100.000ENSPNYG00000013745csde1100100.000Pundamilia_nyererei
ENSACLG00000013296csde110086.625ENSPNAG00000001958csde110085.603Pygocentrus_nattereri
ENSACLG00000013296csde110076.375ENSRNOG00000061058Csde110076.375Rattus_norvegicus
ENSACLG00000013296csde110072.987ENSRBIG00000038966-9472.833Rhinopithecus_bieti
ENSACLG00000013296csde110074.416ENSRBIG00000038088-10074.416Rhinopithecus_bieti
ENSACLG00000013296csde110077.373ENSRROG00000043101CSDE19777.373Rhinopithecus_roxellana
ENSACLG00000013296csde110077.243ENSSBOG00000035592CSDE19577.243Saimiri_boliviensis_boliviensis
ENSACLG00000013296csde110078.674ENSSHAG00000009831CSDE110078.674Sarcophilus_harrisii
ENSACLG00000013296csde110084.805ENSSFOG00015007498csde110084.805Scleropages_formosus
ENSACLG00000013296csde110093.117ENSSMAG00000007203csde110092.848Scophthalmus_maximus
ENSACLG00000013296csde110094.408ENSSDUG00000015380csde110094.408Seriola_dumerili
ENSACLG00000013296csde110094.408ENSSLDG00000008819csde110094.408Seriola_lalandi_dorsalis
ENSACLG00000013296csde110076.983ENSSARG00000000738CSDE19476.983Sorex_araneus
ENSACLG00000013296csde110079.714ENSSPUG00000008714CSDE110079.324Sphenodon_punctatus
ENSACLG00000013296csde110093.609ENSSPAG00000000716csde110093.368Stegastes_partitus
ENSACLG00000013296csde110077.763ENSSSCG00000006752CSDE110077.763Sus_scrofa
ENSACLG00000013296csde110077.805ENSTGUG00000000972CSDE110077.805Taeniopygia_guttata
ENSACLG00000013296csde110086.216ENSTRUG00000007996csde110086.216Takifugu_rubripes
ENSACLG00000013296csde19395.019ENSTNIG00000010878csde110095.019Tetraodon_nigroviridis
ENSACLG00000013296csde17580.368ENSTBEG00000011880-6080.368Tupaia_belangeri
ENSACLG00000013296csde110076.853ENSTTRG00000015583CSDE19476.853Tursiops_truncatus
ENSACLG00000013296csde19282.781ENSUAMG00000021779-9882.609Ursus_americanus
ENSACLG00000013296csde18973.034ENSUAMG00000024289-9973.034Ursus_americanus
ENSACLG00000013296csde110071.001ENSUMAG00000009720-9771.001Ursus_maritimus
ENSACLG00000013296csde19772.749ENSUMAG00000011714-9972.749Ursus_maritimus
ENSACLG00000013296csde110080.420ENSVPAG00000000749CSDE17980.420Vicugna_pacos
ENSACLG00000013296csde19375.948ENSVVUG00000009890CSDE19475.948Vulpes_vulpes
ENSACLG00000013296csde110077.709ENSXETG00000021448csde110077.709Xenopus_tropicalis
ENSACLG00000013296csde19494.553ENSXCOG00000000035csde18994.553Xiphophorus_couchianus
ENSACLG00000013296csde110092.105ENSXMAG00000009080csde19892.175Xiphophorus_maculatus

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