EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000013359 (Gene tree)
Gene ID: -
Gene Symbol: atxn2
Alias: si:dkey-165i4.1
Full Name: ataxin 2
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 15892 bases
Position: chr12:12045035-12060926
Accession: ZDB-GENE-060526-217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000019701	PAM2	PF07145.15	7.4e-06	1	1
ENSACLP00000019696	PAM2	PF07145.15	7.7e-06	1	1
ENSACLP00000019701	LsmAD	PF06741.13	3.1e-10	1	1
ENSACLP00000019696	LsmAD	PF06741.13	3.3e-10	1	1
ENSACLP00000019701	SM-ATX	PF14438.6	2.2e-20	1	1
ENSACLP00000019696	SM-ATX	PF14438.6	2.3e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000020156	-	3192	-	ENSACLP00000019696	1063 (aa)	-	-
ENSACLT00000020160	-	3117	-	ENSACLP00000019701	1038 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013359's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013359's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000013359	atxn2	55	49.219	ENSACLG00000016900	atxn2l	64	50.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013359	atxn2	97	59.176	ENSG00000204842	ATXN2	99	63.139	Homo_sapiens
ENSACLG00000013359	atxn2	97	58.614	ENSAMEG00000013747	ATXN2	97	58.895	Ailuropoda_melanoleuca
ENSACLG00000013359	atxn2	96	89.052	ENSACIG00000004928	atxn2	99	89.279	Amphilophus_citrinellus
ENSACLG00000013359	atxn2	97	80.259	ENSATEG00000018587	atxn2	99	79.205	Anabas_testudineus
ENSACLG00000013359	atxn2	97	59.628	ENSAPLG00000008724	ATXN2	97	58.965	Anas_platyrhynchos
ENSACLG00000013359	atxn2	97	56.244	ENSACAG00000002419	ATXN2	97	57.315	Anolis_carolinensis
ENSACLG00000013359	atxn2	97	58.643	ENSANAG00000022522	ATXN2	99	57.623	Aotus_nancymaae
ENSACLG00000013359	atxn2	91	80.351	ENSAMXG00000002342	atxn2	61	60.894	Astyanax_mexicanus
ENSACLG00000013359	atxn2	97	59.319	ENSBTAG00000022069	ATXN2	99	58.669	Bos_taurus
ENSACLG00000013359	atxn2	97	58.457	ENSCJAG00000011756	ATXN2	99	57.183	Callithrix_jacchus
ENSACLG00000013359	atxn2	97	58.185	ENSCAFG00000008606	ATXN2	79	58.372	Canis_familiaris
ENSACLG00000013359	atxn2	97	58.146	ENSCAFG00020017041	ATXN2	99	58.427	Canis_lupus_dingo
ENSACLG00000013359	atxn2	97	59.044	ENSCHIG00000012141	ATXN2	80	59.044	Capra_hircus
ENSACLG00000013359	atxn2	97	58.895	ENSTSYG00000002717	ATXN2	99	58.005	Carlito_syrichta
ENSACLG00000013359	atxn2	79	55.711	ENSCAPG00000013332	ATXN2	97	53.776	Cavia_aperea
ENSACLG00000013359	atxn2	97	59.308	ENSCPOG00000001390	ATXN2	96	58.315	Cavia_porcellus
ENSACLG00000013359	atxn2	97	58.473	ENSCCAG00000026267	ATXN2	99	57.623	Cebus_capucinus
ENSACLG00000013359	atxn2	97	58.895	ENSCATG00000017877	ATXN2	99	57.561	Cercocebus_atys
ENSACLG00000013359	atxn2	97	59.065	ENSCLAG00000009324	ATXN2	96	58.342	Chinchilla_lanigera
ENSACLG00000013359	atxn2	97	58.989	ENSCSAG00000002590	ATXN2	90	58.989	Chlorocebus_sabaeus
ENSACLG00000013359	atxn2	77	61.792	ENSCHOG00000004284	ATXN2	83	61.792	Choloepus_hoffmanni
ENSACLG00000013359	atxn2	97	58.614	ENSCANG00000042302	ATXN2	99	57.808	Colobus_angolensis_palliatus
ENSACLG00000013359	atxn2	97	56.782	ENSCGRG00001022603	Atxn2	81	56.554	Cricetulus_griseus_chok1gshd
ENSACLG00000013359	atxn2	97	58.233	ENSCGRG00000015823	Atxn2	96	57.339	Cricetulus_griseus_crigri
ENSACLG00000013359	atxn2	91	85.512	ENSCSEG00000009072	-	95	84.672	Cynoglossus_semilaevis
ENSACLG00000013359	atxn2	96	77.684	ENSCVAG00000020160	atxn2	86	88.530	Cyprinodon_variegatus
ENSACLG00000013359	atxn2	96	67.075	ENSDARG00000052897	atxn2	93	66.226	Danio_rerio
ENSACLG00000013359	atxn2	97	58.427	ENSDNOG00000015696	ATXN2	99	56.555	Dasypus_novemcinctus
ENSACLG00000013359	atxn2	97	55.440	ENSDORG00000000808	Atxn2	97	55.251	Dipodomys_ordii
ENSACLG00000013359	atxn2	90	57.200	ENSETEG00000005224	ATXN2	74	57.769	Echinops_telfairi
ENSACLG00000013359	atxn2	97	58.708	ENSEASG00005012077	ATXN2	99	57.745	Equus_asinus_asinus
ENSACLG00000013359	atxn2	97	58.962	ENSECAG00000014347	ATXN2	78	59.151	Equus_caballus
ENSACLG00000013359	atxn2	69	70.070	ENSEEUG00000014635	-	69	70.070	Erinaceus_europaeus
ENSACLG00000013359	atxn2	97	67.168	ENSELUG00000019632	atxn2	94	80.070	Esox_lucius
ENSACLG00000013359	atxn2	97	58.885	ENSFCAG00000003178	ATXN2	99	57.467	Felis_catus
ENSACLG00000013359	atxn2	97	58.062	ENSFALG00000009001	ATXN2	99	57.584	Ficedula_albicollis
ENSACLG00000013359	atxn2	97	59.180	ENSFDAG00000020942	ATXN2	97	59.273	Fukomys_damarensis
ENSACLG00000013359	atxn2	89	76.515	ENSGMOG00000007412	atxn2	91	76.010	Gadus_morhua
ENSACLG00000013359	atxn2	96	56.780	ENSGALG00000004625	ATXN2	99	55.576	Gallus_gallus
ENSACLG00000013359	atxn2	96	77.863	ENSGAFG00000003302	atxn2	94	77.567	Gambusia_affinis
ENSACLG00000013359	atxn2	97	79.944	ENSGACG00000006295	atxn2	98	80.827	Gasterosteus_aculeatus
ENSACLG00000013359	atxn2	97	58.895	ENSGGOG00000002137	ATXN2	99	58.989	Gorilla_gorilla
ENSACLG00000013359	atxn2	97	59.659	ENSHGLG00000009812	ATXN2	82	59.848	Heterocephalus_glaber_female
ENSACLG00000013359	atxn2	97	59.328	ENSHGLG00100019351	ATXN2	97	59.328	Heterocephalus_glaber_male
ENSACLG00000013359	atxn2	90	79.298	ENSIPUG00000016649	atxn2	93	79.298	Ictalurus_punctatus
ENSACLG00000013359	atxn2	97	59.082	ENSSTOG00000000978	ATXN2	96	58.099	Ictidomys_tridecemlineatus
ENSACLG00000013359	atxn2	57	79.201	ENSLBEG00000017484	atxn2	97	79.542	Labrus_bergylta
ENSACLG00000013359	atxn2	97	60.204	ENSLACG00000012531	ATXN2	97	60.519	Latimeria_chalumnae
ENSACLG00000013359	atxn2	97	66.070	ENSLOCG00000007880	atxn2	94	67.416	Lepisosteus_oculatus
ENSACLG00000013359	atxn2	97	59.121	ENSLAFG00000007416	ATXN2	97	58.979	Loxodonta_africana
ENSACLG00000013359	atxn2	97	58.989	ENSMFAG00000000374	ATXN2	99	57.991	Macaca_fascicularis
ENSACLG00000013359	atxn2	97	59.082	ENSMMUG00000002226	ATXN2	99	58.989	Macaca_mulatta
ENSACLG00000013359	atxn2	97	58.989	ENSMNEG00000035588	ATXN2	99	57.991	Macaca_nemestrina
ENSACLG00000013359	atxn2	97	58.801	ENSMLEG00000024324	ATXN2	99	57.991	Mandrillus_leucophaeus
ENSACLG00000013359	atxn2	97	59.610	ENSMGAG00000005288	ATXN2	97	59.701	Meleagris_gallopavo
ENSACLG00000013359	atxn2	61	53.294	ENSMAUG00000008223	-	97	52.709	Mesocricetus_auratus
ENSACLG00000013359	atxn2	97	59.176	ENSMICG00000013541	ATXN2	99	59.176	Microcebus_murinus
ENSACLG00000013359	atxn2	84	57.342	ENSMOCG00000005219	Atxn2	96	57.497	Microtus_ochrogaster
ENSACLG00000013359	atxn2	97	77.676	ENSMMOG00000013189	atxn2	99	77.534	Mola_mola
ENSACLG00000013359	atxn2	97	59.422	ENSMODG00000012221	ATXN2	82	58.895	Monodelphis_domestica
ENSACLG00000013359	atxn2	97	74.456	ENSMALG00000018529	atxn2	67	81.188	Monopterus_albus
ENSACLG00000013359	atxn2	97	57.674	MGP_CAROLIEiJ_G0027692	Atxn2	92	57.449	Mus_caroli
ENSACLG00000013359	atxn2	97	57.610	ENSMUSG00000042605	Atxn2	96	56.034	Mus_musculus
ENSACLG00000013359	atxn2	97	50.422	MGP_PahariEiJ_G0024272	Atxn2	97	51.537	Mus_pahari
ENSACLG00000013359	atxn2	97	57.649	MGP_SPRETEiJ_G0028690	Atxn2	96	56.545	Mus_spretus
ENSACLG00000013359	atxn2	97	57.116	ENSMPUG00000002212	ATXN2	97	57.303	Mustela_putorius_furo
ENSACLG00000013359	atxn2	97	58.294	ENSMLUG00000015559	ATXN2	97	58.388	Myotis_lucifugus
ENSACLG00000013359	atxn2	97	94.245	ENSNBRG00000015794	atxn2	99	94.245	Neolamprologus_brichardi
ENSACLG00000013359	atxn2	97	58.895	ENSNLEG00000000484	ATXN2	99	57.991	Nomascus_leucogenys
ENSACLG00000013359	atxn2	83	77.143	ENSMEUG00000012244	-	83	77.143	Notamacropus_eugenii
ENSACLG00000013359	atxn2	97	56.191	ENSOPRG00000014599	ATXN2	98	56.004	Ochotona_princeps
ENSACLG00000013359	atxn2	97	59.138	ENSODEG00000010798	ATXN2	99	58.912	Octodon_degus
ENSACLG00000013359	atxn2	97	89.786	ENSONIG00000014521	atxn2	95	89.786	Oreochromis_niloticus
ENSACLG00000013359	atxn2	84	57.460	ENSOANG00000004796	ATXN2	99	57.067	Ornithorhynchus_anatinus
ENSACLG00000013359	atxn2	97	57.944	ENSOCUG00000002855	ATXN2	68	57.811	Oryctolagus_cuniculus
ENSACLG00000013359	atxn2	97	69.434	ENSORLG00000003606	atxn2	87	74.780	Oryzias_latipes
ENSACLG00000013359	atxn2	97	68.904	ENSORLG00020000785	atxn2	94	87.324	Oryzias_latipes_hni
ENSACLG00000013359	atxn2	96	69.829	ENSORLG00015012345	atxn2	94	87.324	Oryzias_latipes_hsok
ENSACLG00000013359	atxn2	98	68.686	ENSOMEG00000020080	atxn2	94	87.324	Oryzias_melastigma
ENSACLG00000013359	atxn2	97	58.989	ENSOGAG00000000609	ATXN2	80	59.176	Otolemur_garnettii
ENSACLG00000013359	atxn2	97	58.950	ENSOARG00000018223	ATXN2	97	58.950	Ovis_aries
ENSACLG00000013359	atxn2	97	59.121	ENSPPAG00000028043	ATXN2	99	59.027	Pan_paniscus
ENSACLG00000013359	atxn2	97	58.521	ENSPPRG00000003573	ATXN2	99	57.561	Panthera_pardus
ENSACLG00000013359	atxn2	97	58.614	ENSPTIG00000021122	ATXN2	99	58.895	Panthera_tigris_altaica
ENSACLG00000013359	atxn2	97	59.176	ENSPTRG00000029540	ATXN2	99	59.082	Pan_troglodytes
ENSACLG00000013359	atxn2	97	58.989	ENSPANG00000017168	ATXN2	99	57.991	Papio_anubis
ENSACLG00000013359	atxn2	97	66.699	ENSPKIG00000023134	atxn2	94	65.962	Paramormyrops_kingsleyae
ENSACLG00000013359	atxn2	97	60.112	ENSPSIG00000002353	-	97	60.113	Pelodiscus_sinensis
ENSACLG00000013359	atxn2	97	75.691	ENSPMGG00000005074	atxn2	99	74.586	Periophthalmus_magnuspinnatus
ENSACLG00000013359	atxn2	84	57.342	ENSPEMG00000015340	Atxn2	96	57.403	Peromyscus_maniculatus_bairdii
ENSACLG00000013359	atxn2	63	54.924	ENSPMAG00000004603	atxn2	66	54.924	Petromyzon_marinus
ENSACLG00000013359	atxn2	62	54.769	ENSPCIG00000006165	-	99	54.259	Phascolarctos_cinereus
ENSACLG00000013359	atxn2	97	79.718	ENSPREG00000014825	atxn2	98	79.155	Poecilia_reticulata
ENSACLG00000013359	atxn2	97	58.989	ENSPPYG00000004963	ATXN2	83	58.801	Pongo_abelii
ENSACLG00000013359	atxn2	96	58.467	ENSPCOG00000022031	ATXN2	99	58.553	Propithecus_coquereli
ENSACLG00000013359	atxn2	90	71.127	ENSPVAG00000013179	ATXN2	74	71.479	Pteropus_vampyrus
ENSACLG00000013359	atxn2	58	87.312	ENSPNYG00000016981	atxn2	99	87.312	Pundamilia_nyererei
ENSACLG00000013359	atxn2	97	57.156	ENSRNOG00000001256	Atxn2	96	57.674	Rattus_norvegicus
ENSACLG00000013359	atxn2	97	57.467	ENSRBIG00000039212	ATXN2	99	57.372	Rhinopithecus_bieti
ENSACLG00000013359	atxn2	97	58.614	ENSRROG00000031170	ATXN2	99	57.808	Rhinopithecus_roxellana
ENSACLG00000013359	atxn2	97	57.856	ENSSBOG00000031563	ATXN2	99	57.713	Saimiri_boliviensis_boliviensis
ENSACLG00000013359	atxn2	97	58.017	ENSSHAG00000007304	ATXN2	97	57.714	Sarcophilus_harrisii
ENSACLG00000013359	atxn2	97	63.467	ENSSFOG00015017229	atxn2	99	63.662	Scleropages_formosus
ENSACLG00000013359	atxn2	96	81.716	ENSSMAG00000004627	atxn2	99	83.442	Scophthalmus_maximus
ENSACLG00000013359	atxn2	98	74.815	ENSSDUG00000001223	atxn2	94	93.548	Seriola_dumerili
ENSACLG00000013359	atxn2	97	81.877	ENSSLDG00000019837	atxn2	99	82.486	Seriola_lalandi_dorsalis
ENSACLG00000013359	atxn2	59	68.326	ENSSARG00000006291	ATXN2	58	68.326	Sorex_araneus
ENSACLG00000013359	atxn2	97	57.987	ENSSPUG00000010317	ATXN2	91	58.442	Sphenodon_punctatus
ENSACLG00000013359	atxn2	96	84.791	ENSSPAG00000000377	atxn2	96	85.429	Stegastes_partitus
ENSACLG00000013359	atxn2	97	58.505	ENSSSCG00000009834	ATXN2	91	58.388	Sus_scrofa
ENSACLG00000013359	atxn2	99	75.316	ENSTRUG00000016801	atxn2	99	74.045	Takifugu_rubripes
ENSACLG00000013359	atxn2	85	71.560	ENSTBEG00000001985	ATXN2	83	71.560	Tupaia_belangeri
ENSACLG00000013359	atxn2	86	63.923	ENSTTRG00000000952	ATXN2	72	63.680	Tursiops_truncatus
ENSACLG00000013359	atxn2	97	58.333	ENSUAMG00000025295	ATXN2	91	58.614	Ursus_americanus
ENSACLG00000013359	atxn2	97	58.868	ENSUMAG00000007315	ATXN2	99	58.614	Ursus_maritimus
ENSACLG00000013359	atxn2	88	63.333	ENSVPAG00000005940	ATXN2	90	58.824	Vicugna_pacos
ENSACLG00000013359	atxn2	97	58.318	ENSVVUG00000016107	ATXN2	99	58.521	Vulpes_vulpes
ENSACLG00000013359	atxn2	97	56.134	ENSXETG00000020912	atxn2	98	55.948	Xenopus_tropicalis
ENSACLG00000013359	atxn2	55	76.254	ENSXCOG00000010001	atxn2	98	76.589	Xiphophorus_couchianus