EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000013504 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 9899 bases
Position: chrLS419842.1:154-10052
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000019958	UPF0020	PF01170.18	1.1e-26	1	2
ENSACLP00000019958	UPF0020	PF01170.18	1.1e-26	2	2
ENSACLP00000019927	UPF0020	PF01170.18	8.3e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000020420	-	1080	-	ENSACLP00000019958	359 (aa)	-	-
ENSACLT00000020388	-	1149	-	ENSACLP00000019927	382 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000013504	-	86	70.443	ENSACLG00000023333	thumpd3	82	70.443

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013504	-	73	66.234	ENSG00000134077	THUMPD3	63	66.234	Homo_sapiens
ENSACLG00000013504	-	86	61.425	ENSAPOG00000015836	thumpd3	85	61.071	Acanthochromis_polyacanthus
ENSACLG00000013504	-	73	68.831	ENSAMEG00000011321	THUMPD3	63	68.831	Ailuropoda_melanoleuca
ENSACLG00000013504	-	86	64.373	ENSACIG00000020096	thumpd3	82	64.619	Amphilophus_citrinellus
ENSACLG00000013504	-	86	60.934	ENSAOCG00000004399	thumpd3	83	60.584	Amphiprion_ocellaris
ENSACLG00000013504	-	86	61.179	ENSAPEG00000016740	thumpd3	83	60.827	Amphiprion_percula
ENSACLG00000013504	-	86	59.214	ENSATEG00000005345	thumpd3	82	60.814	Anabas_testudineus
ENSACLG00000013504	-	73	40.214	ENSAPLG00000003598	THUMPD3	69	67.532	Anas_platyrhynchos
ENSACLG00000013504	-	72	69.333	ENSACAG00000014974	THUMPD3	63	69.333	Anolis_carolinensis
ENSACLG00000013504	-	73	64.935	ENSANAG00000002365	THUMPD3	63	64.935	Aotus_nancymaae
ENSACLG00000013504	-	73	70.238	ENSAMXG00000015683	thumpd3	87	49.279	Astyanax_mexicanus
ENSACLG00000013504	-	73	67.857	ENSBTAG00000003112	THUMPD3	65	67.857	Bos_taurus
ENSACLG00000013504	-	65	50.000	WBGene00010846	M04B2.2	61	50.000	Caenorhabditis_elegans
ENSACLG00000013504	-	73	64.935	ENSCJAG00000015949	THUMPD3	63	64.935	Callithrix_jacchus
ENSACLG00000013504	-	73	71.429	ENSCAFG00000005499	THUMPD3	63	71.429	Canis_familiaris
ENSACLG00000013504	-	64	70.130	ENSCAFG00000008060	-	72	70.130	Canis_familiaris
ENSACLG00000013504	-	65	66.667	ENSCAFG00020025887	-	70	66.667	Canis_lupus_dingo
ENSACLG00000013504	-	73	71.429	ENSCAFG00020008895	-	63	71.429	Canis_lupus_dingo
ENSACLG00000013504	-	73	66.667	ENSCHIG00000024037	THUMPD3	65	66.667	Capra_hircus
ENSACLG00000013504	-	75	53.922	ENSTSYG00000000159	THUMPD3	87	39.729	Carlito_syrichta
ENSACLG00000013504	-	80	38.209	ENSCAPG00000017486	THUMPD3	76	38.209	Cavia_aperea
ENSACLG00000013504	-	72	74.667	ENSCPOG00000033287	THUMPD3	63	74.667	Cavia_porcellus
ENSACLG00000013504	-	85	35.208	ENSCCAG00000021429	-	85	36.430	Cebus_capucinus
ENSACLG00000013504	-	73	64.935	ENSCCAG00000027067	-	63	64.935	Cebus_capucinus
ENSACLG00000013504	-	73	66.234	ENSCATG00000040999	THUMPD3	63	66.234	Cercocebus_atys
ENSACLG00000013504	-	72	74.667	ENSCLAG00000000690	THUMPD3	63	74.667	Chinchilla_lanigera
ENSACLG00000013504	-	73	66.234	ENSCSAG00000010753	THUMPD3	63	66.234	Chlorocebus_sabaeus
ENSACLG00000013504	-	86	41.705	ENSCPBG00000014771	THUMPD3	65	68.831	Chrysemys_picta_bellii
ENSACLG00000013504	-	71	39.726	ENSCSAVG00000008668	-	66	39.726	Ciona_savignyi
ENSACLG00000013504	-	73	66.234	ENSCANG00000031901	THUMPD3	63	66.234	Colobus_angolensis_palliatus
ENSACLG00000013504	-	75	57.576	ENSCGRG00001024117	Thumpd3	87	40.319	Cricetulus_griseus_chok1gshd
ENSACLG00000013504	-	75	57.576	ENSCGRG00000018116	Thumpd3	87	40.319	Cricetulus_griseus_crigri
ENSACLG00000013504	-	87	55.797	ENSCSEG00000002546	thumpd3	85	55.797	Cynoglossus_semilaevis
ENSACLG00000013504	-	86	55.637	ENSCVAG00000001019	thumpd3	81	55.637	Cyprinodon_variegatus
ENSACLG00000013504	-	72	71.605	ENSDARG00000059634	thumpd3	65	71.605	Danio_rerio
ENSACLG00000013504	-	71	71.233	ENSDNOG00000047668	THUMPD3	62	71.233	Dasypus_novemcinctus
ENSACLG00000013504	-	73	67.857	ENSDORG00000003257	Thumpd3	66	67.857	Dipodomys_ordii
ENSACLG00000013504	-	62	36.395	ENSETEG00000020239	-	57	37.671	Echinops_telfairi
ENSACLG00000013504	-	94	36.854	ENSEBUG00000004221	thumpd3	98	36.854	Eptatretus_burgeri
ENSACLG00000013504	-	73	72.727	ENSEASG00005013327	THUMPD3	63	72.727	Equus_asinus_asinus
ENSACLG00000013504	-	73	71.429	ENSECAG00000002016	THUMPD3	63	71.429	Equus_caballus
ENSACLG00000013504	-	73	72.727	ENSEEUG00000014696	THUMPD3	63	72.727	Erinaceus_europaeus
ENSACLG00000013504	-	72	64.356	ENSELUG00000018246	thumpd3	63	64.356	Esox_lucius
ENSACLG00000013504	-	73	71.429	ENSFCAG00000006171	THUMPD3	63	71.429	Felis_catus
ENSACLG00000013504	-	70	77.273	ENSFALG00000013631	THUMPD3	70	65.000	Ficedula_albicollis
ENSACLG00000013504	-	72	73.333	ENSFDAG00000014825	THUMPD3	63	74.667	Fukomys_damarensis
ENSACLG00000013504	-	87	58.313	ENSFHEG00000006006	thumpd3	83	58.313	Fundulus_heteroclitus
ENSACLG00000013504	-	87	47.458	ENSGMOG00000007923	thumpd3	84	47.932	Gadus_morhua
ENSACLG00000013504	-	75	56.190	ENSGALG00000044813	THUMPD3	72	56.190	Gallus_gallus
ENSACLG00000013504	-	87	57.246	ENSGAFG00000021645	thumpd3	83	57.246	Gambusia_affinis
ENSACLG00000013504	-	86	55.528	ENSGACG00000000930	thumpd3	87	55.528	Gasterosteus_aculeatus
ENSACLG00000013504	-	86	41.014	ENSGAGG00000022750	THUMPD3	65	67.532	Gopherus_agassizii
ENSACLG00000013504	-	73	66.234	ENSGGOG00000000604	THUMPD3	63	66.234	Gorilla_gorilla
ENSACLG00000013504	-	86	69.951	ENSHBUG00000013405	thumpd3	82	69.951	Haplochromis_burtoni
ENSACLG00000013504	-	72	73.333	ENSHGLG00000016200	THUMPD3	64	68.293	Heterocephalus_glaber_female
ENSACLG00000013504	-	72	73.333	ENSHGLG00100017321	-	63	74.667	Heterocephalus_glaber_male
ENSACLG00000013504	-	89	39.948	ENSHGLG00100000505	-	87	40.722	Heterocephalus_glaber_male
ENSACLG00000013504	-	87	53.398	ENSHCOG00000004871	thumpd3	87	53.995	Hippocampus_comes
ENSACLG00000013504	-	87	49.153	ENSIPUG00000019415	THUMPD3	64	70.238	Ictalurus_punctatus
ENSACLG00000013504	-	73	66.667	ENSSTOG00000003973	THUMPD3	65	66.667	Ictidomys_tridecemlineatus
ENSACLG00000013504	-	85	40.816	ENSJJAG00000017751	Thumpd3	80	42.188	Jaculus_jaculus
ENSACLG00000013504	-	87	57.317	ENSKMAG00000021025	thumpd3	78	57.317	Kryptolebias_marmoratus
ENSACLG00000013504	-	89	57.243	ENSLBEG00000012252	thumpd3	86	57.243	Labrus_bergylta
ENSACLG00000013504	-	87	41.002	ENSLACG00000018604	THUMPD3	85	40.774	Latimeria_chalumnae
ENSACLG00000013504	-	73	71.429	ENSLOCG00000009800	thumpd3	69	71.429	Lepisosteus_oculatus
ENSACLG00000013504	-	73	70.130	ENSLAFG00000005103	THUMPD3	63	70.130	Loxodonta_africana
ENSACLG00000013504	-	73	66.234	ENSMFAG00000044884	THUMPD3	63	66.234	Macaca_fascicularis
ENSACLG00000013504	-	73	66.234	ENSMMUG00000017307	THUMPD3	63	66.234	Macaca_mulatta
ENSACLG00000013504	-	73	66.234	ENSMNEG00000030529	THUMPD3	63	66.234	Macaca_nemestrina
ENSACLG00000013504	-	73	66.234	ENSMLEG00000032943	THUMPD3	63	66.234	Mandrillus_leucophaeus
ENSACLG00000013504	-	92	55.300	ENSMAMG00000023934	thumpd3	89	55.479	Mastacembelus_armatus
ENSACLG00000013504	-	86	70.443	ENSMZEG00005010623	thumpd3	82	70.443	Maylandia_zebra
ENSACLG00000013504	-	63	66.667	ENSMGAG00000010182	THUMPD3	69	66.667	Meleagris_gallopavo
ENSACLG00000013504	-	73	72.727	ENSMAUG00000012250	Thumpd3	63	72.727	Mesocricetus_auratus
ENSACLG00000013504	-	70	73.913	ENSMICG00000010095	THUMPD3	59	73.913	Microcebus_murinus
ENSACLG00000013504	-	73	66.667	ENSMOCG00000020148	Thumpd3	65	66.667	Microtus_ochrogaster
ENSACLG00000013504	-	90	55.478	ENSMMOG00000021791	thumpd3	91	55.478	Mola_mola
ENSACLG00000013504	-	70	73.913	ENSMODG00000004715	-	68	73.913	Monodelphis_domestica
ENSACLG00000013504	-	89	56.808	ENSMALG00000017316	thumpd3	91	56.808	Monopterus_albus
ENSACLG00000013504	-	53	40.254	MGP_CAROLIEiJ_G0028714	-	51	40.650	Mus_caroli
ENSACLG00000013504	-	73	70.130	ENSMUSG00000030264	Thumpd3	63	71.429	Mus_musculus
ENSACLG00000013504	-	73	66.667	MGP_PahariEiJ_G0022465	Thumpd3	63	70.130	Mus_pahari
ENSACLG00000013504	-	73	70.130	MGP_SPRETEiJ_G0029742	Thumpd3	63	70.130	Mus_spretus
ENSACLG00000013504	-	86	40.256	ENSMPUG00000005219	-	84	40.863	Mustela_putorius_furo
ENSACLG00000013504	-	73	68.831	ENSMPUG00000017066	-	65	63.095	Mustela_putorius_furo
ENSACLG00000013504	-	73	66.234	ENSMLUG00000008538	THUMPD3	62	66.234	Myotis_lucifugus
ENSACLG00000013504	-	73	63.095	ENSNGAG00000021014	-	65	63.095	Nannospalax_galili
ENSACLG00000013504	-	86	35.938	ENSNGAG00000001549	-	82	35.938	Nannospalax_galili
ENSACLG00000013504	-	86	69.458	ENSNBRG00000004886	thumpd3	82	69.458	Neolamprologus_brichardi
ENSACLG00000013504	-	73	66.234	ENSNLEG00000003863	THUMPD3	63	66.234	Nomascus_leucogenys
ENSACLG00000013504	-	62	61.905	ENSMEUG00000009819	THUMPD3	91	38.442	Notamacropus_eugenii
ENSACLG00000013504	-	72	51.261	ENSOPRG00000002020	THUMPD3	91	38.442	Ochotona_princeps
ENSACLG00000013504	-	54	79.592	ENSODEG00000018242	THUMPD3	71	79.592	Octodon_degus
ENSACLG00000013504	-	86	67.980	ENSONIG00000018977	thumpd3	82	67.980	Oreochromis_niloticus
ENSACLG00000013504	-	63	63.095	ENSOANG00000014481	THUMPD3	97	36.957	Ornithorhynchus_anatinus
ENSACLG00000013504	-	73	71.429	ENSOCUG00000010921	THUMPD3	67	71.429	Oryctolagus_cuniculus
ENSACLG00000013504	-	87	54.634	ENSORLG00000000676	thumpd3	84	54.634	Oryzias_latipes
ENSACLG00000013504	-	87	54.612	ENSORLG00020007509	thumpd3	84	54.612	Oryzias_latipes_hni
ENSACLG00000013504	-	87	54.878	ENSORLG00015003615	thumpd3	84	54.878	Oryzias_latipes_hsok
ENSACLG00000013504	-	87	51.750	ENSOMEG00000014115	thumpd3	84	53.659	Oryzias_melastigma
ENSACLG00000013504	-	62	62.338	ENSOGAG00000017111	THUMPD3	67	62.338	Otolemur_garnettii
ENSACLG00000013504	-	73	66.667	ENSOARG00000007139	THUMPD3	64	66.667	Ovis_aries
ENSACLG00000013504	-	73	66.234	ENSPPAG00000025852	THUMPD3	63	66.234	Pan_paniscus
ENSACLG00000013504	-	73	71.429	ENSPPRG00000008071	THUMPD3	63	71.429	Panthera_pardus
ENSACLG00000013504	-	73	71.429	ENSPTIG00000017923	THUMPD3	63	71.429	Panthera_tigris_altaica
ENSACLG00000013504	-	73	66.234	ENSPTRG00000014585	THUMPD3	63	66.234	Pan_troglodytes
ENSACLG00000013504	-	73	66.234	ENSPANG00000016253	THUMPD3	63	66.234	Papio_anubis
ENSACLG00000013504	-	83	55.039	ENSPKIG00000014009	thumpd3	65	75.000	Paramormyrops_kingsleyae
ENSACLG00000013504	-	73	68.831	ENSPSIG00000007370	THUMPD3	65	68.831	Pelodiscus_sinensis
ENSACLG00000013504	-	87	53.771	ENSPMGG00000017563	thumpd3	86	53.771	Periophthalmus_magnuspinnatus
ENSACLG00000013504	-	73	71.429	ENSPEMG00000022411	Thumpd3	63	70.130	Peromyscus_maniculatus_bairdii
ENSACLG00000013504	-	74	61.728	ENSPMAG00000001291	thumpd3	71	63.636	Petromyzon_marinus
ENSACLG00000013504	-	73	67.532	ENSPCIG00000002049	THUMPD3	63	67.532	Phascolarctos_cinereus
ENSACLG00000013504	-	87	56.796	ENSPFOG00000002318	thumpd3	83	56.796	Poecilia_formosa
ENSACLG00000013504	-	73	75.000	ENSPLAG00000014804	thumpd3	83	56.796	Poecilia_latipinna
ENSACLG00000013504	-	73	75.000	ENSPMEG00000000582	thumpd3	83	56.796	Poecilia_mexicana
ENSACLG00000013504	-	87	57.108	ENSPREG00000009176	thumpd3	83	57.108	Poecilia_reticulata
ENSACLG00000013504	-	86	37.795	ENSPPYG00000017616	-	86	37.795	Pongo_abelii
ENSACLG00000013504	-	73	66.234	ENSPPYG00000029461	THUMPD3	63	66.234	Pongo_abelii
ENSACLG00000013504	-	63	66.667	ENSPCAG00000015398	THUMPD3	68	66.667	Procavia_capensis
ENSACLG00000013504	-	65	66.000	ENSPCOG00000023618	-	67	66.000	Propithecus_coquereli
ENSACLG00000013504	-	85	41.221	ENSPCOG00000018095	-	81	42.132	Propithecus_coquereli
ENSACLG00000013504	-	75	58.586	ENSPVAG00000008721	THUMPD3	87	40.227	Pteropus_vampyrus
ENSACLG00000013504	-	86	70.443	ENSPNYG00000006918	thumpd3	82	70.443	Pundamilia_nyererei
ENSACLG00000013504	-	73	70.238	ENSPNAG00000014936	thumpd3	85	50.240	Pygocentrus_nattereri
ENSACLG00000013504	-	73	68.831	ENSRNOG00000006941	Thumpd3	63	68.831	Rattus_norvegicus
ENSACLG00000013504	-	73	66.234	ENSRBIG00000035954	THUMPD3	63	66.234	Rhinopithecus_bieti
ENSACLG00000013504	-	73	64.935	ENSRROG00000035734	THUMPD3	63	64.935	Rhinopithecus_roxellana
ENSACLG00000013504	-	73	64.935	ENSSBOG00000023567	THUMPD3	66	64.935	Saimiri_boliviensis_boliviensis
ENSACLG00000013504	-	73	66.234	ENSSHAG00000014467	THUMPD3	64	66.234	Sarcophilus_harrisii
ENSACLG00000013504	-	80	58.824	ENSSFOG00015019210	thumpd3	88	47.564	Scleropages_formosus
ENSACLG00000013504	-	89	58.178	ENSSMAG00000000609	thumpd3	86	59.709	Scophthalmus_maximus
ENSACLG00000013504	-	89	57.746	ENSSDUG00000012179	thumpd3	89	57.746	Seriola_dumerili
ENSACLG00000013504	-	89	57.512	ENSSLDG00000022028	thumpd3	87	57.512	Seriola_lalandi_dorsalis
ENSACLG00000013504	-	79	54.286	ENSSARG00000002239	THUMPD3	61	64.286	Sorex_araneus
ENSACLG00000013504	-	73	64.935	ENSSPUG00000017461	THUMPD3	65	64.935	Sphenodon_punctatus
ENSACLG00000013504	-	86	61.916	ENSSPAG00000008345	thumpd3	82	61.557	Stegastes_partitus
ENSACLG00000013504	-	73	72.727	ENSSSCG00000011542	THUMPD3	63	72.727	Sus_scrofa
ENSACLG00000013504	-	73	70.130	ENSTGUG00000010440	THUMPD3	71	70.130	Taeniopygia_guttata
ENSACLG00000013504	-	87	48.515	ENSTRUG00000004420	thumpd3	84	48.750	Takifugu_rubripes
ENSACLG00000013504	-	86	55.419	ENSTNIG00000014627	thumpd3	88	55.122	Tetraodon_nigroviridis
ENSACLG00000013504	-	73	70.130	ENSTBEG00000003450	THUMPD3	65	65.060	Tupaia_belangeri
ENSACLG00000013504	-	73	66.667	ENSTTRG00000009694	THUMPD3	65	66.667	Tursiops_truncatus
ENSACLG00000013504	-	73	68.831	ENSUAMG00000009412	THUMPD3	63	68.831	Ursus_americanus
ENSACLG00000013504	-	73	68.831	ENSUMAG00000019241	THUMPD3	61	68.831	Ursus_maritimus
ENSACLG00000013504	-	60	78.571	ENSVPAG00000002855	THUMPD3	65	78.571	Vicugna_pacos
ENSACLG00000013504	-	73	71.429	ENSVVUG00000025278	THUMPD3	63	71.429	Vulpes_vulpes
ENSACLG00000013504	-	73	64.286	ENSXETG00000001447	thumpd3	65	64.286	Xenopus_tropicalis
ENSACLG00000013504	-	89	55.093	ENSXCOG00000000159	thumpd3	91	55.093	Xiphophorus_couchianus
ENSACLG00000013504	-	87	56.280	ENSXMAG00000001423	thumpd3	83	56.280	Xiphophorus_maculatus