EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000013692 (Gene tree)
Gene ID: 113021154
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 6680 bases
Position: chr4:24000623-24007302
Accession: 113021154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000020157	PseudoU_synth_2	PF00849.22	9.6e-27	1	1
ENSACLP00000020151	PseudoU_synth_2	PF00849.22	3.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000020620	-	2400	-	ENSACLP00000020157	311 (aa)	XP_026021422	UPI000329AFDA
ENSACLT00000020613	-	2484	-	ENSACLP00000020151	339 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013692's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013692's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013692	rpusd1	98	57.605	ENSG00000007376	RPUSD1	99	67.665	Homo_sapiens
ENSACLG00000013692	rpusd1	100	81.994	ENSAPOG00000022221	rpusd1	99	83.280	Acanthochromis_polyacanthus
ENSACLG00000013692	rpusd1	98	58.958	ENSAMEG00000007461	RPUSD1	98	57.419	Ailuropoda_melanoleuca
ENSACLG00000013692	rpusd1	100	90.354	ENSACIG00000015863	rpusd1	100	90.354	Amphilophus_citrinellus
ENSACLG00000013692	rpusd1	100	83.280	ENSAOCG00000021975	rpusd1	97	83.923	Amphiprion_ocellaris
ENSACLG00000013692	rpusd1	100	83.601	ENSAPEG00000001316	rpusd1	97	84.244	Amphiprion_percula
ENSACLG00000013692	rpusd1	100	83.280	ENSATEG00000002984	rpusd1	99	83.923	Anabas_testudineus
ENSACLG00000013692	rpusd1	77	59.259	ENSAPLG00000012316	RPUSD1	98	59.259	Anas_platyrhynchos
ENSACLG00000013692	rpusd1	98	63.072	ENSACAG00000008953	RPUSD1	99	63.072	Anolis_carolinensis
ENSACLG00000013692	rpusd1	98	57.980	ENSANAG00000024709	RPUSD1	81	65.613	Aotus_nancymaae
ENSACLG00000013692	rpusd1	99	69.481	ENSAMXG00000019802	rpusd1	99	67.097	Astyanax_mexicanus
ENSACLG00000013692	rpusd1	98	60.586	ENSBTAG00000000179	RPUSD1	98	53.488	Bos_taurus
ENSACLG00000013692	rpusd1	98	57.655	ENSCJAG00000012253	RPUSD1	98	57.792	Callithrix_jacchus
ENSACLG00000013692	rpusd1	98	57.980	ENSCAFG00000019614	RPUSD1	98	57.419	Canis_familiaris
ENSACLG00000013692	rpusd1	98	57.980	ENSCAFG00020008891	RPUSD1	98	57.419	Canis_lupus_dingo
ENSACLG00000013692	rpusd1	98	60.912	ENSCHIG00000012872	RPUSD1	98	53.890	Capra_hircus
ENSACLG00000013692	rpusd1	98	56.678	ENSTSYG00000036934	RPUSD1	98	56.678	Carlito_syrichta
ENSACLG00000013692	rpusd1	98	57.980	ENSCAPG00000014219	RPUSD1	83	65.613	Cavia_aperea
ENSACLG00000013692	rpusd1	98	57.980	ENSCPOG00000034604	RPUSD1	83	65.613	Cavia_porcellus
ENSACLG00000013692	rpusd1	98	57.655	ENSCCAG00000034385	RPUSD1	81	65.217	Cebus_capucinus
ENSACLG00000013692	rpusd1	98	58.252	ENSCATG00000042983	RPUSD1	98	58.576	Cercocebus_atys
ENSACLG00000013692	rpusd1	98	57.655	ENSCLAG00000013966	RPUSD1	83	66.008	Chinchilla_lanigera
ENSACLG00000013692	rpusd1	98	57.929	ENSCSAG00000012121	RPUSD1	98	58.252	Chlorocebus_sabaeus
ENSACLG00000013692	rpusd1	98	61.765	ENSCPBG00000021101	RPUSD1	99	61.765	Chrysemys_picta_bellii
ENSACLG00000013692	rpusd1	81	65.613	ENSCANG00000028576	RPUSD1	90	65.613	Colobus_angolensis_palliatus
ENSACLG00000013692	rpusd1	98	57.143	ENSCGRG00001014253	Rpusd1	98	56.410	Cricetulus_griseus_chok1gshd
ENSACLG00000013692	rpusd1	98	57.143	ENSCGRG00000017995	Rpusd1	98	56.410	Cricetulus_griseus_crigri
ENSACLG00000013692	rpusd1	98	80.984	ENSCSEG00000018512	rpusd1	98	80.984	Cynoglossus_semilaevis
ENSACLG00000013692	rpusd1	100	79.743	ENSCVAG00000022746	rpusd1	100	79.743	Cyprinodon_variegatus
ENSACLG00000013692	rpusd1	98	70.588	ENSDARG00000060192	rpusd1	99	67.320	Danio_rerio
ENSACLG00000013692	rpusd1	98	57.329	ENSDNOG00000003721	RPUSD1	98	57.329	Dasypus_novemcinctus
ENSACLG00000013692	rpusd1	98	57.980	ENSDORG00000026656	Rpusd1	98	59.609	Dipodomys_ordii
ENSACLG00000013692	rpusd1	96	46.032	ENSEBUG00000008767	rpusd1	79	52.490	Eptatretus_burgeri
ENSACLG00000013692	rpusd1	99	58.842	ENSEASG00005018421	RPUSD1	61	67.059	Equus_asinus_asinus
ENSACLG00000013692	rpusd1	100	69.775	ENSELUG00000014307	rpusd1	90	71.061	Esox_lucius
ENSACLG00000013692	rpusd1	98	58.632	ENSFCAG00000010359	RPUSD1	98	57.980	Felis_catus
ENSACLG00000013692	rpusd1	98	63.399	ENSFALG00000003211	RPUSD1	99	62.300	Ficedula_albicollis
ENSACLG00000013692	rpusd1	98	57.980	ENSFDAG00000013398	RPUSD1	98	55.696	Fukomys_damarensis
ENSACLG00000013692	rpusd1	100	79.100	ENSFHEG00000004736	rpusd1	100	79.421	Fundulus_heteroclitus
ENSACLG00000013692	rpusd1	99	73.163	ENSGMOG00000010756	rpusd1	99	73.163	Gadus_morhua
ENSACLG00000013692	rpusd1	98	63.072	ENSGALG00000005315	RPUSD1	99	63.072	Gallus_gallus
ENSACLG00000013692	rpusd1	100	78.135	ENSGAFG00000009886	rpusd1	100	78.135	Gambusia_affinis
ENSACLG00000013692	rpusd1	100	80.707	ENSGACG00000014276	rpusd1	100	83.601	Gasterosteus_aculeatus
ENSACLG00000013692	rpusd1	98	61.111	ENSGAGG00000004181	RPUSD1	99	61.111	Gopherus_agassizii
ENSACLG00000013692	rpusd1	98	58.387	ENSGGOG00000013997	RPUSD1	98	58.710	Gorilla_gorilla
ENSACLG00000013692	rpusd1	100	99.678	ENSHBUG00000023728	rpusd1	100	99.678	Haplochromis_burtoni
ENSACLG00000013692	rpusd1	98	57.003	ENSHGLG00000002595	RPUSD1	83	64.822	Heterocephalus_glaber_female
ENSACLG00000013692	rpusd1	98	57.003	ENSHGLG00100014303	RPUSD1	83	64.822	Heterocephalus_glaber_male
ENSACLG00000013692	rpusd1	99	76.299	ENSHCOG00000002390	rpusd1	99	76.299	Hippocampus_comes
ENSACLG00000013692	rpusd1	98	68.197	ENSIPUG00000001570	rpusd1	98	69.180	Ictalurus_punctatus
ENSACLG00000013692	rpusd1	98	58.306	ENSSTOG00000004276	RPUSD1	98	56.688	Ictidomys_tridecemlineatus
ENSACLG00000013692	rpusd1	98	58.958	ENSJJAG00000015696	Rpusd1	98	58.306	Jaculus_jaculus
ENSACLG00000013692	rpusd1	100	78.205	ENSKMAG00000017287	rpusd1	100	78.205	Kryptolebias_marmoratus
ENSACLG00000013692	rpusd1	100	77.814	ENSLBEG00000013354	RPUSD1	99	80.064	Labrus_bergylta
ENSACLG00000013692	rpusd1	100	77.814	ENSLBEG00000022502	rpusd1	99	80.064	Labrus_bergylta
ENSACLG00000013692	rpusd1	98	61.765	ENSLACG00000008869	RPUSD1	99	59.048	Latimeria_chalumnae
ENSACLG00000013692	rpusd1	69	79.630	ENSLOCG00000005682	rpusd1	99	79.630	Lepisosteus_oculatus
ENSACLG00000013692	rpusd1	98	56.678	ENSLAFG00000002115	RPUSD1	84	64.032	Loxodonta_africana
ENSACLG00000013692	rpusd1	98	58.252	ENSMFAG00000003961	RPUSD1	98	58.576	Macaca_fascicularis
ENSACLG00000013692	rpusd1	98	58.252	ENSMMUG00000000842	RPUSD1	98	58.576	Macaca_mulatta
ENSACLG00000013692	rpusd1	98	58.252	ENSMNEG00000042712	RPUSD1	98	58.576	Macaca_nemestrina
ENSACLG00000013692	rpusd1	98	58.252	ENSMLEG00000030591	RPUSD1	98	58.576	Mandrillus_leucophaeus
ENSACLG00000013692	rpusd1	100	84.244	ENSMAMG00000004735	rpusd1	99	84.566	Mastacembelus_armatus
ENSACLG00000013692	rpusd1	100	100.000	ENSMZEG00005003214	rpusd1	100	100.000	Maylandia_zebra
ENSACLG00000013692	rpusd1	97	63.036	ENSMGAG00000005447	RPUSD1	99	63.036	Meleagris_gallopavo
ENSACLG00000013692	rpusd1	81	56.917	ENSMAUG00000019998	Rpusd1	96	56.917	Mesocricetus_auratus
ENSACLG00000013692	rpusd1	98	57.655	ENSMICG00000017561	RPUSD1	78	75.490	Microcebus_murinus
ENSACLG00000013692	rpusd1	98	57.980	ENSMOCG00000014082	Rpusd1	98	58.632	Microtus_ochrogaster
ENSACLG00000013692	rpusd1	99	77.597	ENSMMOG00000012569	rpusd1	99	77.922	Mola_mola
ENSACLG00000013692	rpusd1	99	61.165	ENSMODG00000016882	RPUSD1	99	58.621	Monodelphis_domestica
ENSACLG00000013692	rpusd1	100	82.637	ENSMALG00000017818	rpusd1	99	84.244	Monopterus_albus
ENSACLG00000013692	rpusd1	98	57.655	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.632	Mus_caroli
ENSACLG00000013692	rpusd1	98	57.655	ENSMUSG00000041199	Rpusd1	98	58.632	Mus_musculus
ENSACLG00000013692	rpusd1	98	57.003	MGP_PahariEiJ_G0023562	Rpusd1	98	55.486	Mus_pahari
ENSACLG00000013692	rpusd1	98	57.655	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.632	Mus_spretus
ENSACLG00000013692	rpusd1	96	58.278	ENSMPUG00000015897	RPUSD1	96	57.377	Mustela_putorius_furo
ENSACLG00000013692	rpusd1	98	58.958	ENSMLUG00000001089	RPUSD1	84	64.504	Myotis_lucifugus
ENSACLG00000013692	rpusd1	98	57.980	ENSNGAG00000003595	Rpusd1	98	51.453	Nannospalax_galili
ENSACLG00000013692	rpusd1	100	95.177	ENSNBRG00000006457	rpusd1	100	95.177	Neolamprologus_brichardi
ENSACLG00000013692	rpusd1	54	49.708	ENSNLEG00000008424	-	97	50.289	Nomascus_leucogenys
ENSACLG00000013692	rpusd1	98	62.092	ENSMEUG00000016049	RPUSD1	98	60.703	Notamacropus_eugenii
ENSACLG00000013692	rpusd1	98	52.117	ENSOPRG00000008340	RPUSD1	98	50.814	Ochotona_princeps
ENSACLG00000013692	rpusd1	98	57.980	ENSODEG00000016945	RPUSD1	83	65.613	Octodon_degus
ENSACLG00000013692	rpusd1	99	97.727	ENSONIG00000015672	rpusd1	100	97.727	Oreochromis_niloticus
ENSACLG00000013692	rpusd1	100	78.135	ENSORLG00000013009	rpusd1	99	77.170	Oryzias_latipes
ENSACLG00000013692	rpusd1	100	77.170	ENSORLG00020010382	rpusd1	99	77.170	Oryzias_latipes_hni
ENSACLG00000013692	rpusd1	100	77.170	ENSORLG00015021354	rpusd1	99	76.206	Oryzias_latipes_hsok
ENSACLG00000013692	rpusd1	100	75.884	ENSOMEG00000021426	rpusd1	99	75.884	Oryzias_melastigma
ENSACLG00000013692	rpusd1	98	57.655	ENSOGAG00000003795	RPUSD1	98	57.655	Otolemur_garnettii
ENSACLG00000013692	rpusd1	98	60.586	ENSOARG00000014254	RPUSD1	98	58.228	Ovis_aries
ENSACLG00000013692	rpusd1	98	57.929	ENSPPAG00000034797	RPUSD1	98	58.252	Pan_paniscus
ENSACLG00000013692	rpusd1	98	58.958	ENSPPRG00000012389	RPUSD1	98	58.306	Panthera_pardus
ENSACLG00000013692	rpusd1	99	58.900	ENSPTIG00000008545	RPUSD1	77	75.248	Panthera_tigris_altaica
ENSACLG00000013692	rpusd1	98	57.929	ENSPTRG00000007565	RPUSD1	98	58.252	Pan_troglodytes
ENSACLG00000013692	rpusd1	98	58.252	ENSPANG00000024401	RPUSD1	98	58.576	Papio_anubis
ENSACLG00000013692	rpusd1	100	67.846	ENSPKIG00000018890	rpusd1	91	65.938	Paramormyrops_kingsleyae
ENSACLG00000013692	rpusd1	98	62.418	ENSPSIG00000013945	RPUSD1	99	62.418	Pelodiscus_sinensis
ENSACLG00000013692	rpusd1	100	70.740	ENSPMGG00000014950	rpusd1	99	70.096	Periophthalmus_magnuspinnatus
ENSACLG00000013692	rpusd1	98	57.655	ENSPEMG00000000497	Rpusd1	98	58.306	Peromyscus_maniculatus_bairdii
ENSACLG00000013692	rpusd1	99	54.045	ENSPMAG00000001563	rpusd1	99	54.369	Petromyzon_marinus
ENSACLG00000013692	rpusd1	99	62.987	ENSPCIG00000021216	-	93	60.952	Phascolarctos_cinereus
ENSACLG00000013692	rpusd1	100	79.100	ENSPFOG00000007946	rpusd1	100	79.100	Poecilia_formosa
ENSACLG00000013692	rpusd1	100	79.421	ENSPLAG00000011925	rpusd1	100	79.100	Poecilia_latipinna
ENSACLG00000013692	rpusd1	100	79.100	ENSPMEG00000002910	rpusd1	100	79.100	Poecilia_mexicana
ENSACLG00000013692	rpusd1	100	80.707	ENSPREG00000019851	rpusd1	100	80.707	Poecilia_reticulata
ENSACLG00000013692	rpusd1	77	67.797	ENSPCAG00000002258	RPUSD1	70	67.797	Procavia_capensis
ENSACLG00000013692	rpusd1	98	57.329	ENSPCOG00000022582	RPUSD1	98	57.329	Propithecus_coquereli
ENSACLG00000013692	rpusd1	98	54.072	ENSPVAG00000013104	RPUSD1	98	54.072	Pteropus_vampyrus
ENSACLG00000013692	rpusd1	100	99.678	ENSPNYG00000024076	rpusd1	100	99.678	Pundamilia_nyererei
ENSACLG00000013692	rpusd1	99	65.909	ENSPNAG00000013806	rpusd1	99	64.839	Pygocentrus_nattereri
ENSACLG00000013692	rpusd1	98	57.792	ENSRNOG00000023639	Rpusd1	98	58.632	Rattus_norvegicus
ENSACLG00000013692	rpusd1	98	58.576	ENSRBIG00000030238	RPUSD1	98	58.900	Rhinopithecus_bieti
ENSACLG00000013692	rpusd1	98	58.576	ENSRROG00000036663	RPUSD1	98	58.900	Rhinopithecus_roxellana
ENSACLG00000013692	rpusd1	98	58.632	ENSSBOG00000033063	RPUSD1	98	57.742	Saimiri_boliviensis_boliviensis
ENSACLG00000013692	rpusd1	98	61.165	ENSSHAG00000013500	RPUSD1	98	59.554	Sarcophilus_harrisii
ENSACLG00000013692	rpusd1	98	70.915	ENSSFOG00015014394	rpusd1	99	67.949	Scleropages_formosus
ENSACLG00000013692	rpusd1	100	84.244	ENSSMAG00000008045	rpusd1	93	84.244	Scophthalmus_maximus
ENSACLG00000013692	rpusd1	100	82.637	ENSSDUG00000001829	rpusd1	97	87.460	Seriola_dumerili
ENSACLG00000013692	rpusd1	100	82.637	ENSSLDG00000020853	rpusd1	97	87.460	Seriola_lalandi_dorsalis
ENSACLG00000013692	rpusd1	53	72.455	ENSSARG00000011187	-	100	72.455	Sorex_araneus
ENSACLG00000013692	rpusd1	63	56.410	ENSSPUG00000005119	-	98	54.872	Sphenodon_punctatus
ENSACLG00000013692	rpusd1	100	87.138	ENSSPAG00000012708	rpusd1	99	87.138	Stegastes_partitus
ENSACLG00000013692	rpusd1	98	59.609	ENSSSCG00000008000	RPUSD1	98	67.323	Sus_scrofa
ENSACLG00000013692	rpusd1	81	69.721	ENSTGUG00000015375	RPUSD1	99	69.721	Taeniopygia_guttata
ENSACLG00000013692	rpusd1	100	80.064	ENSTRUG00000003041	rpusd1	99	80.064	Takifugu_rubripes
ENSACLG00000013692	rpusd1	99	71.429	ENSTNIG00000002660	rpusd1	99	70.779	Tetraodon_nigroviridis
ENSACLG00000013692	rpusd1	98	59.283	ENSTTRG00000010167	RPUSD1	98	54.328	Tursiops_truncatus
ENSACLG00000013692	rpusd1	98	58.306	ENSUAMG00000012736	RPUSD1	98	57.097	Ursus_americanus
ENSACLG00000013692	rpusd1	98	58.306	ENSUMAG00000021174	RPUSD1	91	65.217	Ursus_maritimus
ENSACLG00000013692	rpusd1	98	57.980	ENSVVUG00000012357	RPUSD1	98	57.097	Vulpes_vulpes
ENSACLG00000013692	rpusd1	98	62.745	ENSXETG00000007184	rpusd1	98	60.772	Xenopus_tropicalis
ENSACLG00000013692	rpusd1	100	78.135	ENSXCOG00000017930	rpusd1	100	78.135	Xiphophorus_couchianus
ENSACLG00000013692	rpusd1	100	78.778	ENSXMAG00000024084	rpusd1	100	78.778	Xiphophorus_maculatus