EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000013734 (Gene tree)
Gene ID: 113036848
Gene Symbol: -
Alias: -
Full Name: ras-related protein ORAB-1-like
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 4441 bases
Position: chr14:3228599-3233039
Accession: 113036848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000020231	MMR_HSR1	PF01926.23	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000020699	-	639	-	ENSACLP00000020231	212 (aa)	XP_026049174	UPI000329D29B

Gene Model

Click here to download ENSACLG00000013734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000013734	-	84	56.180	ENSACLG00000019643	-	89	56.180
ENSACLG00000013734	-	97	33.178	ENSACLG00000003898	rab32b	92	33.178
ENSACLG00000013734	-	98	44.907	ENSACLG00000000860	-	95	44.907
ENSACLG00000013734	-	68	45.033	ENSACLG00000010965	-	63	45.033
ENSACLG00000013734	-	84	36.313	ENSACLG00000001218	RAB17	78	36.313
ENSACLG00000013734	-	98	42.105	ENSACLG00000018262	rab25a	96	42.105
ENSACLG00000013734	-	80	49.704	ENSACLG00000026336	rab15	79	49.704
ENSACLG00000013734	-	81	43.353	ENSACLG00000007514	rab42a	80	43.353
ENSACLG00000013734	-	77	38.182	ENSACLG00000027515	KRAS	85	38.889
ENSACLG00000013734	-	79	51.190	ENSACLG00000007076	rab11bb	77	51.190
ENSACLG00000013734	-	77	38.182	ENSACLG00000027677	KRAS	85	38.889
ENSACLG00000013734	-	79	53.571	ENSACLG00000001775	rab11a	78	53.571
ENSACLG00000013734	-	76	49.383	ENSACLG00000015289	rab18b	79	49.383
ENSACLG00000013734	-	58	30.709	ENSACLG00000011811	-	62	30.709
ENSACLG00000013734	-	87	36.757	ENSACLG00000025138	rab6ba	85	36.757
ENSACLG00000013734	-	79	32.370	ENSACLG00000009103	si:cabz01085950.1	85	32.370
ENSACLG00000013734	-	80	46.961	ENSACLG00000027006	zgc:101559	77	46.961
ENSACLG00000013734	-	86	32.787	ENSACLG00000002819	rab23	71	35.119
ENSACLG00000013734	-	83	44.886	ENSACLG00000018066	rab5aa	81	44.886
ENSACLG00000013734	-	87	36.216	ENSACLG00000019423	rab41	84	36.216
ENSACLG00000013734	-	74	33.962	ENSACLG00000025632	rabl2	68	33.962
ENSACLG00000013734	-	80	43.275	ENSACLG00000009468	RAB39B	80	43.275
ENSACLG00000013734	-	81	47.674	ENSACLG00000010251	rab25b	83	47.674
ENSACLG00000013734	-	77	44.172	ENSACLG00000002706	rab5c	80	42.778
ENSACLG00000013734	-	91	42.708	ENSACLG00000013505	-	88	42.708
ENSACLG00000013734	-	78	35.119	ENSACLG00000007804	si:ch73-116o1.2	80	35.119
ENSACLG00000013734	-	80	43.275	ENSACLG00000022893	-	80	43.275
ENSACLG00000013734	-	79	47.619	ENSACLG00000018852	-	76	47.619
ENSACLG00000013734	-	82	38.728	ENSACLG00000026487	rab6bb	79	38.728
ENSACLG00000013734	-	77	36.585	ENSACLG00000001181	hrasb	86	36.585
ENSACLG00000013734	-	77	35.758	ENSACLG00000011249	rras	83	34.756
ENSACLG00000013734	-	96	36.408	ENSACLG00000021470	rab22a	97	36.408
ENSACLG00000013734	-	96	36.019	ENSACLG00000005093	rab34a	77	36.019
ENSACLG00000013734	-	74	36.420	ENSACLG00000008602	RAB29	98	36.420
ENSACLG00000013734	-	88	41.709	ENSACLG00000005720	rab33ba	84	40.777
ENSACLG00000013734	-	75	39.506	ENSACLG00000021109	si:dkey-13a21.4	78	39.506
ENSACLG00000013734	-	84	81.868	ENSACLG00000007644	rab1ab	90	81.868
ENSACLG00000013734	-	58	32.000	ENSACLG00000024991	arl4d	61	32.000
ENSACLG00000013734	-	81	45.930	ENSACLG00000007696	rab12	71	45.930
ENSACLG00000013734	-	79	51.190	ENSACLG00000005446	-	77	51.190
ENSACLG00000013734	-	82	38.202	ENSACLG00000024456	-	84	38.202
ENSACLG00000013734	-	97	34.928	ENSACLG00000024502	-	96	34.928
ENSACLG00000013734	-	50	38.679	ENSACLG00000014417	RAP2B	89	38.983
ENSACLG00000013734	-	79	52.381	ENSACLG00000005420	rab11ba	77	52.381
ENSACLG00000013734	-	81	37.143	ENSACLG00000004795	rab9b	77	37.143
ENSACLG00000013734	-	86	43.169	ENSACLG00000006329	-	84	43.169
ENSACLG00000013734	-	85	42.541	ENSACLG00000008615	-	80	42.541
ENSACLG00000013734	-	75	40.373	ENSACLG00000005733	rab34b	61	40.373
ENSACLG00000013734	-	81	45.714	ENSACLG00000001646	-	83	45.714
ENSACLG00000013734	-	99	44.976	ENSACLG00000010268	rab11al	96	44.976
ENSACLG00000013734	-	73	37.736	ENSACLG00000006647	rab9a	79	37.736
ENSACLG00000013734	-	99	45.933	ENSACLG00000023526	rab30	97	45.933
ENSACLG00000013734	-	57	33.083	ENSACLG00000002442	arfrp1	64	33.083
ENSACLG00000013734	-	77	62.577	ENSACLG00000018721	si:dkey-16l2.16	98	52.381
ENSACLG00000013734	-	80	43.275	ENSACLG00000027590	-	80	43.275
ENSACLG00000013734	-	76	50.000	ENSACLG00000011484	rab18a	79	50.000
ENSACLG00000013734	-	100	72.170	ENSACLG00000013668	rab1ba	100	72.170
ENSACLG00000013734	-	85	31.694	ENSACLG00000008646	rheb	94	31.694
ENSACLG00000013734	-	78	39.053	ENSACLG00000018847	RAB7A	82	39.053
ENSACLG00000013734	-	93	77.665	ENSACLG00000003326	-	96	77.665
ENSACLG00000013734	-	85	30.653	ENSACLG00000019293	rasl11a	76	30.653
ENSACLG00000013734	-	76	41.916	ENSACLG00000021547	rab33a	60	41.916

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013734	-	100	94.393	ENSAPOG00000004980	-	100	94.393	Acanthochromis_polyacanthus
ENSACLG00000013734	-	100	96.729	ENSACIG00000009006	zgc:171927	100	96.729	Amphilophus_citrinellus
ENSACLG00000013734	-	69	93.151	ENSAOCG00000013808	-	93	98.347	Amphiprion_ocellaris
ENSACLG00000013734	-	100	92.056	ENSAOCG00000024149	-	100	92.056	Amphiprion_ocellaris
ENSACLG00000013734	-	100	92.523	ENSAPEG00000022171	zgc:171927	99	92.523	Amphiprion_percula
ENSACLG00000013734	-	100	93.925	ENSATEG00000003430	zgc:171927	100	93.925	Anabas_testudineus
ENSACLG00000013734	-	100	79.812	ENSAMXG00000039486	zgc:171927	100	79.812	Astyanax_mexicanus
ENSACLG00000013734	-	100	90.187	ENSCSEG00000014416	zgc:171927	100	90.187	Cynoglossus_semilaevis
ENSACLG00000013734	-	100	91.589	ENSCVAG00000009222	zgc:171927	100	91.589	Cyprinodon_variegatus
ENSACLG00000013734	-	100	79.343	ENSDARG00000033056	zgc:171927	100	79.343	Danio_rerio
ENSACLG00000013734	-	100	79.439	ENSELUG00000011680	zgc:171927	100	79.439	Esox_lucius
ENSACLG00000013734	-	100	92.991	ENSFHEG00000022176	zgc:171927	100	92.991	Fundulus_heteroclitus
ENSACLG00000013734	-	98	81.818	ENSGMOG00000004979	-	97	81.818	Gadus_morhua
ENSACLG00000013734	-	98	92.823	ENSGAFG00000015702	zgc:171927	84	92.823	Gambusia_affinis
ENSACLG00000013734	-	100	92.523	ENSGACG00000013401	zgc:171927	99	92.523	Gasterosteus_aculeatus
ENSACLG00000013734	-	100	100.000	ENSHBUG00000002397	-	100	100.000	Haplochromis_burtoni
ENSACLG00000013734	-	100	92.523	ENSKMAG00000009856	zgc:171927	100	92.523	Kryptolebias_marmoratus
ENSACLG00000013734	-	100	91.121	ENSLBEG00000005791	-	100	91.121	Labrus_bergylta
ENSACLG00000013734	-	98	90.431	ENSLBEG00000027226	-	89	90.431	Labrus_bergylta
ENSACLG00000013734	-	98	73.077	ENSLOCG00000014692	zgc:171927	96	73.077	Lepisosteus_oculatus
ENSACLG00000013734	-	100	92.991	ENSMAMG00000020135	zgc:171927	100	92.991	Mastacembelus_armatus
ENSACLG00000013734	-	100	100.000	ENSMZEG00005024685	-	100	100.000	Maylandia_zebra
ENSACLG00000013734	-	100	89.252	ENSMMOG00000009833	-	100	89.252	Mola_mola
ENSACLG00000013734	-	100	91.981	ENSMALG00000021129	zgc:171927	100	91.981	Monopterus_albus
ENSACLG00000013734	-	100	98.585	ENSNBRG00000006202	zgc:171927	100	98.585	Neolamprologus_brichardi
ENSACLG00000013734	-	100	90.141	ENSORLG00000000602	zgc:171927	100	90.141	Oryzias_latipes
ENSACLG00000013734	-	100	90.141	ENSORLG00020021071	zgc:171927	100	90.141	Oryzias_latipes_hni
ENSACLG00000013734	-	100	90.141	ENSORLG00015010098	zgc:171927	100	90.141	Oryzias_latipes_hsok
ENSACLG00000013734	-	100	90.654	ENSOMEG00000020594	zgc:171927	100	90.654	Oryzias_melastigma
ENSACLG00000013734	-	100	92.991	ENSPFOG00000013810	zgc:171927	99	92.991	Poecilia_formosa
ENSACLG00000013734	-	100	92.056	ENSPLAG00000005869	zgc:171927	100	92.056	Poecilia_latipinna
ENSACLG00000013734	-	100	92.991	ENSPMEG00000022350	zgc:171927	100	92.991	Poecilia_mexicana
ENSACLG00000013734	-	100	93.925	ENSPREG00000017517	zgc:171927	100	93.925	Poecilia_reticulata
ENSACLG00000013734	-	100	99.057	ENSPNYG00000007520	-	100	99.057	Pundamilia_nyererei
ENSACLG00000013734	-	100	79.812	ENSPNAG00000029574	zgc:171927	100	79.812	Pygocentrus_nattereri
ENSACLG00000013734	-	100	77.934	ENSSFOG00015005464	zgc:171927	99	77.934	Scleropages_formosus
ENSACLG00000013734	-	100	88.785	ENSSMAG00000004416	-	100	88.785	Scophthalmus_maximus
ENSACLG00000013734	-	100	96.262	ENSSDUG00000004445	zgc:171927	100	96.262	Seriola_dumerili
ENSACLG00000013734	-	100	96.262	ENSSLDG00000018024	zgc:171927	100	96.262	Seriola_lalandi_dorsalis
ENSACLG00000013734	-	100	94.393	ENSSPAG00000013533	zgc:171927	100	94.393	Stegastes_partitus
ENSACLG00000013734	-	100	93.925	ENSXCOG00000010695	zgc:171927	100	93.925	Xiphophorus_couchianus
ENSACLG00000013734	-	100	94.393	ENSXMAG00000004683	zgc:171927	100	94.393	Xiphophorus_maculatus