EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000013812 (Gene tree)
Gene ID: -
Gene Symbol: npm1b
Alias: npm4
Full Name: nucleophosmin 1b
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 3318 bases
Position: chr2:7843586-7846903
Accession: ZDB-GENE-080723-7
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000020322	Nucleoplasmin	PF03066.15	4e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000020792	-	714	-	ENSACLP00000020322	213 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013812's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013812's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000013812	npm1b	54	41.880	ENSACLG00000007854	npm3	70	42.105

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013812	npm1b	69	89.041	ENSAPEG00000000868	npm1b	50	89.041	Amphiprion_percula
ENSACLG00000013812	npm1b	71	41.772	ENSCPBG00000027172	-	85	41.139	Chrysemys_picta_bellii
ENSACLG00000013812	npm1b	71	81.457	ENSCVAG00000013016	npm1b	50	82.550	Cyprinodon_variegatus
ENSACLG00000013812	npm1b	67	79.720	ENSELUG00000022123	npm1b	71	78.992	Esox_lucius
ENSACLG00000013812	npm1b	66	89.362	ENSGACG00000016706	npm1b	51	89.041	Gasterosteus_aculeatus
ENSACLG00000013812	npm1b	68	49.342	ENSGAGG00000020250	-	51	49.342	Gopherus_agassizii
ENSACLG00000013812	npm1b	76	100.000	ENSHBUG00000019903	npm1b	52	100.000	Haplochromis_burtoni
ENSACLG00000013812	npm1b	66	90.780	ENSLBEG00000001304	-	71	90.972	Labrus_bergylta
ENSACLG00000013812	npm1b	52	72.727	ENSMZEG00005002840	-	75	94.737	Maylandia_zebra
ENSACLG00000013812	npm1b	62	74.830	ENSMMOG00000003778	npm1b	99	74.830	Mola_mola
ENSACLG00000013812	npm1b	84	99.441	ENSNBRG00000014133	npm1b	97	99.441	Neolamprologus_brichardi
ENSACLG00000013812	npm1b	71	98.675	ENSONIG00000001397	npm1b	52	98.675	Oreochromis_niloticus
ENSACLG00000013812	npm1b	69	71.233	ENSOMEG00000003414	npm1b	52	70.548	Oryzias_melastigma
ENSACLG00000013812	npm1b	55	69.014	ENSPMGG00000008275	npm1b	96	67.606	Periophthalmus_magnuspinnatus
ENSACLG00000013812	npm1b	71	84.106	ENSPFOG00000018357	npm1b	50	85.235	Poecilia_formosa
ENSACLG00000013812	npm1b	100	99.061	ENSPNYG00000001427	npm1b	100	99.061	Pundamilia_nyererei
ENSACLG00000013812	npm1b	55	45.902	ENSSPUG00000015604	-	68	43.571	Sphenodon_punctatus
ENSACLG00000013812	npm1b	55	54.098	ENSSPUG00000017271	-	77	48.701	Sphenodon_punctatus
ENSACLG00000013812	npm1b	71	83.444	ENSXMAG00000001986	npm1b	50	84.564	Xiphophorus_maculatus