EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000013819 (Gene tree)
Gene ID: 113019107
Gene Symbol: trip4
Alias: im:7143009|si:busm1-221i3.1|si:dkey-173l11.4|zgc:153348
Full Name: thyroid hormone receptor interactor 4
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 87343 bases
Position: chr1:9328391-9415733
Accession: 113019107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000020548	ASCH	PF04266.14	7.6e-21	1	1
ENSACLP00000020427	ASCH	PF04266.14	8.1e-21	1	1
ENSACLP00000020564	ASCH	PF04266.14	1.3e-20	1	1
ENSACLP00000020475	ASCH	PF04266.14	3.2e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000020900	-	3086	-	ENSACLP00000020427	573 (aa)	XP_026018420	UPI000329FE3F
ENSACLT00000021037	-	2618	-	ENSACLP00000020564	533 (aa)	XP_026018436	UPI0003297563
ENSACLT00000020949	-	2839	-	ENSACLP00000020475	566 (aa)	XP_026018427	UPI000329ECA9
ENSACLT00000021022	-	1713	-	ENSACLP00000020548	570 (aa)	-	-

Gene Model

Click here to download ENSACLG00000013819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000013819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000013819	trip4	99	61.391	ENSG00000103671	TRIP4	98	60.622	Homo_sapiens
ENSACLG00000013819	trip4	80	82.477	ENSAPOG00000023326	trip4	99	67.668	Acanthochromis_polyacanthus
ENSACLG00000013819	trip4	99	60.938	ENSAMEG00000002591	TRIP4	98	60.104	Ailuropoda_melanoleuca
ENSACLG00000013819	trip4	96	83.333	ENSACIG00000010577	trip4	98	84.007	Amphilophus_citrinellus
ENSACLG00000013819	trip4	97	85.135	ENSAOCG00000000395	trip4	91	84.971	Amphiprion_ocellaris
ENSACLG00000013819	trip4	100	86.911	ENSAPEG00000003621	trip4	100	86.911	Amphiprion_percula
ENSACLG00000013819	trip4	100	86.562	ENSATEG00000019577	trip4	100	86.736	Anabas_testudineus
ENSACLG00000013819	trip4	98	61.485	ENSAPLG00000004612	TRIP4	99	62.264	Anas_platyrhynchos
ENSACLG00000013819	trip4	99	61.379	ENSACAG00000007077	TRIP4	89	61.379	Anolis_carolinensis
ENSACLG00000013819	trip4	99	60.870	ENSANAG00000027612	TRIP4	98	59.931	Aotus_nancymaae
ENSACLG00000013819	trip4	99	73.647	ENSAMXG00000007270	trip4	100	73.647	Astyanax_mexicanus
ENSACLG00000013819	trip4	99	60.696	ENSBTAG00000014493	TRIP4	97	60.696	Bos_taurus
ENSACLG00000013819	trip4	99	60.348	ENSCJAG00000005107	TRIP4	98	59.585	Callithrix_jacchus
ENSACLG00000013819	trip4	99	60.764	ENSCAFG00000017091	TRIP4	98	59.931	Canis_familiaris
ENSACLG00000013819	trip4	99	60.764	ENSCAFG00020008960	TRIP4	98	59.931	Canis_lupus_dingo
ENSACLG00000013819	trip4	97	58.634	ENSCHIG00000023818	TRIP4	97	60.071	Capra_hircus
ENSACLG00000013819	trip4	98	60.453	ENSTSYG00000007185	TRIP4	98	60.139	Carlito_syrichta
ENSACLG00000013819	trip4	66	68.421	ENSCAPG00000017624	TRIP4	82	68.421	Cavia_aperea
ENSACLG00000013819	trip4	99	60.453	ENSCPOG00000006483	TRIP4	98	59.756	Cavia_porcellus
ENSACLG00000013819	trip4	99	58.014	ENSCCAG00000026483	TRIP4	98	57.793	Cebus_capucinus
ENSACLG00000013819	trip4	99	60.445	ENSCATG00000041144	TRIP4	98	60.622	Cercocebus_atys
ENSACLG00000013819	trip4	99	61.285	ENSCLAG00000006872	TRIP4	98	60.967	Chinchilla_lanigera
ENSACLG00000013819	trip4	99	60.445	ENSCSAG00000012499	TRIP4	98	60.622	Chlorocebus_sabaeus
ENSACLG00000013819	trip4	76	56.629	ENSCHOG00000010776	TRIP4	76	56.629	Choloepus_hoffmanni
ENSACLG00000013819	trip4	97	61.626	ENSCPBG00000006093	TRIP4	97	62.143	Chrysemys_picta_bellii
ENSACLG00000013819	trip4	98	44.370	ENSCSAVG00000005293	-	98	44.370	Ciona_savignyi
ENSACLG00000013819	trip4	99	59.051	ENSCANG00000033593	TRIP4	98	58.115	Colobus_angolensis_palliatus
ENSACLG00000013819	trip4	99	60.348	ENSCGRG00001021158	Trip4	98	59.585	Cricetulus_griseus_chok1gshd
ENSACLG00000013819	trip4	99	50.609	ENSCGRG00000002340	Trip4	98	60.364	Cricetulus_griseus_crigri
ENSACLG00000013819	trip4	100	78.397	ENSCSEG00000009015	trip4	99	78.571	Cynoglossus_semilaevis
ENSACLG00000013819	trip4	97	80.695	ENSCVAG00000021094	-	96	75.936	Cyprinodon_variegatus
ENSACLG00000013819	trip4	97	83.591	ENSCVAG00000020984	trip4	99	83.430	Cyprinodon_variegatus
ENSACLG00000013819	trip4	99	72.329	ENSDARG00000098074	trip4	100	72.329	Danio_rerio
ENSACLG00000013819	trip4	99	61.644	ENSDNOG00000008654	TRIP4	98	61.658	Dasypus_novemcinctus
ENSACLG00000013819	trip4	99	60.870	ENSDORG00000014914	Trip4	97	60.696	Dipodomys_ordii
ENSACLG00000013819	trip4	91	39.006	FBgn0031115	CG11710	92	39.006	Drosophila_melanogaster
ENSACLG00000013819	trip4	98	61.043	ENSETEG00000001597	TRIP4	98	60.517	Echinops_telfairi
ENSACLG00000013819	trip4	99	46.957	ENSEBUG00000009039	trip4	99	47.993	Eptatretus_burgeri
ENSACLG00000013819	trip4	99	61.111	ENSEASG00005006538	TRIP4	98	60.449	Equus_asinus_asinus
ENSACLG00000013819	trip4	97	59.696	ENSECAG00000024689	TRIP4	95	60.421	Equus_caballus
ENSACLG00000013819	trip4	79	65.775	ENSEEUG00000007741	TRIP4	78	65.775	Erinaceus_europaeus
ENSACLG00000013819	trip4	99	72.855	ENSELUG00000022449	trip4	99	72.855	Esox_lucius
ENSACLG00000013819	trip4	99	61.458	ENSFCAG00000010618	TRIP4	98	60.622	Felis_catus
ENSACLG00000013819	trip4	99	60.549	ENSFALG00000009816	TRIP4	99	60.549	Ficedula_albicollis
ENSACLG00000013819	trip4	99	60.417	ENSFDAG00000017051	TRIP4	98	60.104	Fukomys_damarensis
ENSACLG00000013819	trip4	100	84.669	ENSFHEG00000015795	trip4	100	84.669	Fundulus_heteroclitus
ENSACLG00000013819	trip4	100	76.042	ENSGMOG00000008455	trip4	100	76.042	Gadus_morhua
ENSACLG00000013819	trip4	98	61.724	ENSGALG00000030672	TRIP4	99	62.500	Gallus_gallus
ENSACLG00000013819	trip4	99	83.916	ENSGAFG00000003491	trip4	99	83.916	Gambusia_affinis
ENSACLG00000013819	trip4	100	81.100	ENSGACG00000016986	trip4	100	81.100	Gasterosteus_aculeatus
ENSACLG00000013819	trip4	84	63.265	ENSGAGG00000003671	TRIP4	87	63.265	Gopherus_agassizii
ENSACLG00000013819	trip4	99	61.565	ENSGGOG00000022608	TRIP4	98	60.794	Gorilla_gorilla
ENSACLG00000013819	trip4	100	99.651	ENSHBUG00000021071	trip4	100	99.651	Haplochromis_burtoni
ENSACLG00000013819	trip4	99	59.722	ENSHGLG00000009286	TRIP4	98	59.585	Heterocephalus_glaber_female
ENSACLG00000013819	trip4	99	59.549	ENSHGLG00100017760	TRIP4	98	59.413	Heterocephalus_glaber_male
ENSACLG00000013819	trip4	100	81.326	ENSHCOG00000017904	trip4	100	81.326	Hippocampus_comes
ENSACLG00000013819	trip4	99	71.701	ENSIPUG00000013205	trip4	100	72.049	Ictalurus_punctatus
ENSACLG00000013819	trip4	99	60.938	ENSSTOG00000014228	TRIP4	98	60.276	Ictidomys_tridecemlineatus
ENSACLG00000013819	trip4	96	53.860	ENSJJAG00000001629	Trip4	98	54.480	Jaculus_jaculus
ENSACLG00000013819	trip4	100	84.642	ENSKMAG00000001297	trip4	100	84.642	Kryptolebias_marmoratus
ENSACLG00000013819	trip4	100	86.213	ENSLBEG00000018354	trip4	100	86.213	Labrus_bergylta
ENSACLG00000013819	trip4	99	63.605	ENSLACG00000014856	TRIP4	99	63.605	Latimeria_chalumnae
ENSACLG00000013819	trip4	99	69.444	ENSLOCG00000014993	trip4	99	69.444	Lepisosteus_oculatus
ENSACLG00000013819	trip4	99	61.632	ENSLAFG00000017612	TRIP4	98	60.967	Loxodonta_africana
ENSACLG00000013819	trip4	99	60.616	ENSMFAG00000036568	TRIP4	98	60.794	Macaca_fascicularis
ENSACLG00000013819	trip4	99	60.616	ENSMMUG00000009882	TRIP4	98	60.794	Macaca_mulatta
ENSACLG00000013819	trip4	99	60.616	ENSMNEG00000033592	TRIP4	98	60.794	Macaca_nemestrina
ENSACLG00000013819	trip4	99	60.445	ENSMLEG00000027911	TRIP4	98	60.622	Mandrillus_leucophaeus
ENSACLG00000013819	trip4	100	86.435	ENSMAMG00000013374	trip4	100	86.435	Mastacembelus_armatus
ENSACLG00000013819	trip4	100	100.000	ENSMZEG00005013450	trip4	100	100.000	Maylandia_zebra
ENSACLG00000013819	trip4	99	61.979	ENSMICG00000008679	TRIP4	98	61.485	Microcebus_murinus
ENSACLG00000013819	trip4	99	61.217	ENSMOCG00000012669	Trip4	98	60.276	Microtus_ochrogaster
ENSACLG00000013819	trip4	97	83.935	ENSMMOG00000002315	trip4	98	83.935	Mola_mola
ENSACLG00000013819	trip4	99	62.630	ENSMODG00000010743	TRIP4	90	61.872	Monodelphis_domestica
ENSACLG00000013819	trip4	99	60.348	MGP_CAROLIEiJ_G0032370	Trip4	98	59.413	Mus_caroli
ENSACLG00000013819	trip4	99	60.348	ENSMUSG00000032386	Trip4	98	59.413	Mus_musculus
ENSACLG00000013819	trip4	99	59.310	MGP_PahariEiJ_G0015235	Trip4	98	59.240	Mus_pahari
ENSACLG00000013819	trip4	99	60.522	MGP_SPRETEiJ_G0033509	Trip4	98	59.585	Mus_spretus
ENSACLG00000013819	trip4	99	60.243	ENSMPUG00000000568	TRIP4	98	59.343	Mustela_putorius_furo
ENSACLG00000013819	trip4	95	60.289	ENSMLUG00000013367	TRIP4	100	59.964	Myotis_lucifugus
ENSACLG00000013819	trip4	99	60.139	ENSNGAG00000019566	Trip4	98	59.552	Nannospalax_galili
ENSACLG00000013819	trip4	97	96.731	ENSNBRG00000020663	trip4	98	96.416	Neolamprologus_brichardi
ENSACLG00000013819	trip4	99	61.391	ENSNLEG00000012455	TRIP4	98	60.622	Nomascus_leucogenys
ENSACLG00000013819	trip4	64	58.602	ENSMEUG00000005886	TRIP4	75	58.602	Notamacropus_eugenii
ENSACLG00000013819	trip4	99	59.375	ENSOPRG00000009512	TRIP4	98	59.375	Ochotona_princeps
ENSACLG00000013819	trip4	99	59.932	ENSODEG00000016494	TRIP4	99	59.796	Octodon_degus
ENSACLG00000013819	trip4	97	96.958	ENSONIG00000005703	trip4	99	96.958	Oreochromis_niloticus
ENSACLG00000013819	trip4	99	61.872	ENSOANG00000013357	TRIP4	96	61.872	Ornithorhynchus_anatinus
ENSACLG00000013819	trip4	99	60.417	ENSOCUG00000002322	TRIP4	98	59.931	Oryctolagus_cuniculus
ENSACLG00000013819	trip4	100	78.709	ENSORLG00000001710	trip4	100	78.709	Oryzias_latipes
ENSACLG00000013819	trip4	100	78.709	ENSORLG00020022346	trip4	100	78.709	Oryzias_latipes_hni
ENSACLG00000013819	trip4	100	78.360	ENSORLG00015022509	trip4	100	78.360	Oryzias_latipes_hsok
ENSACLG00000013819	trip4	100	79.407	ENSOMEG00000007655	trip4	100	79.407	Oryzias_melastigma
ENSACLG00000013819	trip4	99	54.623	ENSOGAG00000012427	TRIP4	99	54.623	Otolemur_garnettii
ENSACLG00000013819	trip4	99	60.000	ENSOARG00000020739	TRIP4	97	60.000	Ovis_aries
ENSACLG00000013819	trip4	99	61.391	ENSPPAG00000017953	TRIP4	98	60.622	Pan_paniscus
ENSACLG00000013819	trip4	99	61.458	ENSPPRG00000013668	TRIP4	98	60.622	Panthera_pardus
ENSACLG00000013819	trip4	99	61.285	ENSPTIG00000014502	TRIP4	98	60.449	Panthera_tigris_altaica
ENSACLG00000013819	trip4	99	57.143	ENSPTRG00000007160	TRIP4	98	57.093	Pan_troglodytes
ENSACLG00000013819	trip4	99	60.445	ENSPANG00000016750	TRIP4	98	60.622	Papio_anubis
ENSACLG00000013819	trip4	98	66.353	ENSPKIG00000009253	trip4	100	66.353	Paramormyrops_kingsleyae
ENSACLG00000013819	trip4	99	68.739	ENSPKIG00000022978	-	100	68.739	Paramormyrops_kingsleyae
ENSACLG00000013819	trip4	95	63.082	ENSPSIG00000012082	TRIP4	98	63.082	Pelodiscus_sinensis
ENSACLG00000013819	trip4	97	79.502	ENSPMGG00000019015	trip4	94	79.856	Periophthalmus_magnuspinnatus
ENSACLG00000013819	trip4	99	60.069	ENSPEMG00000012446	Trip4	98	59.310	Peromyscus_maniculatus_bairdii
ENSACLG00000013819	trip4	99	62.284	ENSPCIG00000029450	TRIP4	93	62.457	Phascolarctos_cinereus
ENSACLG00000013819	trip4	99	84.266	ENSPFOG00000014732	trip4	99	84.266	Poecilia_formosa
ENSACLG00000013819	trip4	99	84.091	ENSPLAG00000013794	trip4	99	84.091	Poecilia_latipinna
ENSACLG00000013819	trip4	99	84.441	ENSPMEG00000001331	trip4	99	84.441	Poecilia_mexicana
ENSACLG00000013819	trip4	99	83.217	ENSPREG00000006576	trip4	99	83.217	Poecilia_reticulata
ENSACLG00000013819	trip4	99	61.565	ENSPPYG00000006550	TRIP4	98	60.794	Pongo_abelii
ENSACLG00000013819	trip4	99	53.739	ENSPCAG00000016310	TRIP4	98	52.941	Procavia_capensis
ENSACLG00000013819	trip4	99	46.575	ENSPCOG00000013484	TRIP4	98	47.323	Propithecus_coquereli
ENSACLG00000013819	trip4	95	55.476	ENSPVAG00000016613	TRIP4	98	55.476	Pteropus_vampyrus
ENSACLG00000013819	trip4	100	90.000	ENSPNYG00000011318	trip4	100	90.702	Pundamilia_nyererei
ENSACLG00000013819	trip4	99	73.345	ENSPNAG00000020884	trip4	99	73.345	Pygocentrus_nattereri
ENSACLG00000013819	trip4	99	59.756	ENSRNOG00000016121	Trip4	97	59.756	Rattus_norvegicus
ENSACLG00000013819	trip4	86	62.097	ENSRBIG00000038027	TRIP4	97	62.097	Rhinopithecus_bieti
ENSACLG00000013819	trip4	99	61.391	ENSRROG00000030525	TRIP4	98	60.622	Rhinopithecus_roxellana
ENSACLG00000013819	trip4	99	54.130	ENSSBOG00000020516	TRIP4	98	54.867	Saimiri_boliviensis_boliviensis
ENSACLG00000013819	trip4	95	62.816	ENSSHAG00000000040	TRIP4	100	62.025	Sarcophilus_harrisii
ENSACLG00000013819	trip4	99	69.019	ENSSFOG00015000143	trip4	99	69.019	Scleropages_formosus
ENSACLG00000013819	trip4	99	81.119	ENSSMAG00000010539	trip4	100	81.119	Scophthalmus_maximus
ENSACLG00000013819	trip4	100	86.562	ENSSDUG00000000225	trip4	100	86.562	Seriola_dumerili
ENSACLG00000013819	trip4	100	86.038	ENSSLDG00000000215	trip4	100	86.038	Seriola_lalandi_dorsalis
ENSACLG00000013819	trip4	82	61.243	ENSSARG00000003710	TRIP4	79	61.243	Sorex_araneus
ENSACLG00000013819	trip4	98	56.250	ENSSPUG00000004511	TRIP4	98	58.169	Sphenodon_punctatus
ENSACLG00000013819	trip4	100	87.652	ENSSPAG00000008520	trip4	100	87.652	Stegastes_partitus
ENSACLG00000013819	trip4	99	60.764	ENSSSCG00000004552	TRIP4	97	61.126	Sus_scrofa
ENSACLG00000013819	trip4	99	59.413	ENSTGUG00000004673	TRIP4	99	60.622	Taeniopygia_guttata
ENSACLG00000013819	trip4	100	80.522	ENSTRUG00000016488	trip4	100	80.522	Takifugu_rubripes
ENSACLG00000013819	trip4	99	75.043	ENSTNIG00000009582	trip4	98	75.043	Tetraodon_nigroviridis
ENSACLG00000013819	trip4	94	61.594	ENSTBEG00000015881	TRIP4	100	61.081	Tupaia_belangeri
ENSACLG00000013819	trip4	87	65.574	ENSTTRG00000009674	TRIP4	86	65.574	Tursiops_truncatus
ENSACLG00000013819	trip4	99	60.590	ENSUMAG00000012640	TRIP4	98	59.758	Ursus_maritimus
ENSACLG00000013819	trip4	99	55.862	ENSVPAG00000010808	TRIP4	98	55.959	Vicugna_pacos
ENSACLG00000013819	trip4	99	61.111	ENSVVUG00000013776	TRIP4	98	60.276	Vulpes_vulpes
ENSACLG00000013819	trip4	99	59.829	ENSXETG00000010649	trip4	98	59.829	Xenopus_tropicalis
ENSACLG00000013819	trip4	99	84.266	ENSXMAG00000000526	trip4	99	84.266	Xiphophorus_maculatus