EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000014192 (Gene tree)
Gene ID: 113012265
Gene Symbol: si:dkey-33c12.4
Alias: fc10f01|si:ch211-243o19.6|wu:fc10f01
Full Name: si:dkey-33c12.4
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 27861 bases
Position: chr19:4347346-4375206
Accession: ZDB-GENE-030131-2527
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000020862	RRM_1	PF00076.22	2.1e-09	1	1
ENSACLP00000020919	RRM_1	PF00076.22	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000021398	-	3361	-	ENSACLP00000020919	641 (aa)	-	-
ENSACLT00000021336	-	3559	-	ENSACLP00000020862	707 (aa)	-	-

Gene Model

Click here to download ENSACLG00000014192's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000014192's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000014192	si:dkey-33c12.4	71	31.788	ENSACLG00000012346	-	65	36.634
ENSACLG00000014192	si:dkey-33c12.4	54	42.618	ENSACLG00000003019	-	74	36.920

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000014192	si:dkey-33c12.4	58	31.937	ENSAPOG00000019633	zgc:123010	58	32.796	Acanthochromis_polyacanthus
ENSACLG00000014192	si:dkey-33c12.4	100	63.047	ENSAPOG00000005058	si:dkey-33c12.4	98	63.827	Acanthochromis_polyacanthus
ENSACLG00000014192	si:dkey-33c12.4	52	41.935	ENSAPOG00000022403	-	69	37.474	Acanthochromis_polyacanthus
ENSACLG00000014192	si:dkey-33c12.4	100	62.879	ENSAOCG00000020066	si:dkey-33c12.4	97	63.814	Amphiprion_ocellaris
ENSACLG00000014192	si:dkey-33c12.4	52	42.330	ENSAOCG00000000431	-	52	43.429	Amphiprion_ocellaris
ENSACLG00000014192	si:dkey-33c12.4	58	31.937	ENSAOCG00000005910	zgc:123010	58	32.533	Amphiprion_ocellaris
ENSACLG00000014192	si:dkey-33c12.4	58	31.937	ENSAPEG00000014305	zgc:123010	62	32.533	Amphiprion_percula
ENSACLG00000014192	si:dkey-33c12.4	52	43.895	ENSAPEG00000023603	-	52	43.429	Amphiprion_percula
ENSACLG00000014192	si:dkey-33c12.4	67	34.459	ENSATEG00000022160	-	80	35.211	Anabas_testudineus
ENSACLG00000014192	si:dkey-33c12.4	58	40.789	ENSATEG00000018302	-	80	35.660	Anabas_testudineus
ENSACLG00000014192	si:dkey-33c12.4	92	61.889	ENSATEG00000018885	si:dkey-33c12.4	99	60.417	Anabas_testudineus
ENSACLG00000014192	si:dkey-33c12.4	90	37.910	ENSAMXG00000010871	si:dkey-33c12.4	56	45.178	Astyanax_mexicanus
ENSACLG00000014192	si:dkey-33c12.4	88	31.624	ENSCPBG00000024454	-	50	35.027	Chrysemys_picta_bellii
ENSACLG00000014192	si:dkey-33c12.4	80	34.515	ENSCSEG00000002755	-	63	40.267	Cynoglossus_semilaevis
ENSACLG00000014192	si:dkey-33c12.4	65	38.318	ENSCVAG00000004187	-	75	35.833	Cyprinodon_variegatus
ENSACLG00000014192	si:dkey-33c12.4	100	55.487	ENSCVAG00000006564	-	100	54.260	Cyprinodon_variegatus
ENSACLG00000014192	si:dkey-33c12.4	91	36.993	ENSDARG00000057890	si:dkey-33c12.4	55	42.895	Danio_rerio
ENSACLG00000014192	si:dkey-33c12.4	72	34.815	ENSDARG00000039082	zgc:123010	68	31.139	Danio_rerio
ENSACLG00000014192	si:dkey-33c12.4	87	36.713	ENSELUG00000001633	-	60	40.547	Esox_lucius
ENSACLG00000014192	si:dkey-33c12.4	72	31.511	ENSELUG00000021447	-	86	31.329	Esox_lucius
ENSACLG00000014192	si:dkey-33c12.4	98	38.930	ENSELUG00000002009	si:dkey-33c12.4	78	60.714	Esox_lucius
ENSACLG00000014192	si:dkey-33c12.4	99	60.809	ENSFHEG00000005521	si:dkey-33c12.4	100	60.268	Fundulus_heteroclitus
ENSACLG00000014192	si:dkey-33c12.4	50	42.249	ENSFHEG00000009983	-	52	41.742	Fundulus_heteroclitus
ENSACLG00000014192	si:dkey-33c12.4	53	36.782	ENSGMOG00000018473	zgc:123010	88	36.782	Gadus_morhua
ENSACLG00000014192	si:dkey-33c12.4	99	60.620	ENSGAFG00000017596	si:dkey-33c12.4	99	61.469	Gambusia_affinis
ENSACLG00000014192	si:dkey-33c12.4	59	32.051	ENSGAFG00000009373	zgc:123010	55	42.236	Gambusia_affinis
ENSACLG00000014192	si:dkey-33c12.4	53	43.020	ENSGAFG00000016594	-	69	36.504	Gambusia_affinis
ENSACLG00000014192	si:dkey-33c12.4	51	73.446	ENSGACG00000004936	-	99	73.446	Gasterosteus_aculeatus
ENSACLG00000014192	si:dkey-33c12.4	100	97.819	ENSHBUG00000010735	si:dkey-33c12.4	100	98.943	Haplochromis_burtoni
ENSACLG00000014192	si:dkey-33c12.4	71	31.788	ENSHBUG00000016720	-	65	36.634	Haplochromis_burtoni
ENSACLG00000014192	si:dkey-33c12.4	91	38.416	ENSIPUG00000005998	si:dkey-33c12.4	99	38.158	Ictalurus_punctatus
ENSACLG00000014192	si:dkey-33c12.4	55	40.616	ENSKMAG00000006468	-	56	41.429	Kryptolebias_marmoratus
ENSACLG00000014192	si:dkey-33c12.4	99	59.219	ENSKMAG00000016610	si:dkey-33c12.4	99	61.364	Kryptolebias_marmoratus
ENSACLG00000014192	si:dkey-33c12.4	58	32.199	ENSKMAG00000021350	zgc:123010	59	32.800	Kryptolebias_marmoratus
ENSACLG00000014192	si:dkey-33c12.4	64	38.462	ENSLBEG00000028046	-	62	39.430	Labrus_bergylta
ENSACLG00000014192	si:dkey-33c12.4	99	54.758	ENSLBEG00000021088	-	99	56.627	Labrus_bergylta
ENSACLG00000014192	si:dkey-33c12.4	90	54.110	ENSLBEG00000017203	-	99	56.436	Labrus_bergylta
ENSACLG00000014192	si:dkey-33c12.4	92	30.757	ENSLACG00000004602	-	57	45.789	Latimeria_chalumnae
ENSACLG00000014192	si:dkey-33c12.4	70	33.974	ENSLOCG00000008967	zgc:123010	82	32.692	Lepisosteus_oculatus
ENSACLG00000014192	si:dkey-33c12.4	88	37.018	ENSLOCG00000001861	-	54	42.328	Lepisosteus_oculatus
ENSACLG00000014192	si:dkey-33c12.4	99	63.807	ENSMAMG00000000111	si:dkey-33c12.4	99	64.857	Mastacembelus_armatus
ENSACLG00000014192	si:dkey-33c12.4	79	35.838	ENSMAMG00000004311	-	58	43.989	Mastacembelus_armatus
ENSACLG00000014192	si:dkey-33c12.4	100	98.287	ENSMZEG00005014276	si:dkey-33c12.4	100	99.396	Maylandia_zebra
ENSACLG00000014192	si:dkey-33c12.4	64	39.623	ENSMZEG00005000585	-	74	36.920	Maylandia_zebra
ENSACLG00000014192	si:dkey-33c12.4	59	39.950	ENSMALG00000003167	-	55	40.731	Monopterus_albus
ENSACLG00000014192	si:dkey-33c12.4	58	32.461	ENSMALG00000017698	zgc:123010	59	33.333	Monopterus_albus
ENSACLG00000014192	si:dkey-33c12.4	99	60.283	ENSMALG00000002265	si:dkey-33c12.4	99	62.443	Monopterus_albus
ENSACLG00000014192	si:dkey-33c12.4	51	30.159	ENSONIG00000018353	zgc:123010	63	30.504	Oreochromis_niloticus
ENSACLG00000014192	si:dkey-33c12.4	55	41.979	ENSONIG00000007538	-	90	55.952	Oreochromis_niloticus
ENSACLG00000014192	si:dkey-33c12.4	99	51.501	ENSORLG00000029651	si:dkey-33c12.4	96	52.174	Oryzias_latipes
ENSACLG00000014192	si:dkey-33c12.4	90	34.991	ENSORLG00000030385	-	69	36.404	Oryzias_latipes
ENSACLG00000014192	si:dkey-33c12.4	99	52.133	ENSORLG00020008750	si:dkey-33c12.4	96	51.121	Oryzias_latipes_hni
ENSACLG00000014192	si:dkey-33c12.4	83	36.059	ENSORLG00015008400	-	69	37.079	Oryzias_latipes_hsok
ENSACLG00000014192	si:dkey-33c12.4	85	34.712	ENSOMEG00000009428	-	51	42.478	Oryzias_melastigma
ENSACLG00000014192	si:dkey-33c12.4	99	50.377	ENSOMEG00000008913	-	98	51.488	Oryzias_melastigma
ENSACLG00000014192	si:dkey-33c12.4	96	37.792	ENSPKIG00000011819	-	52	45.799	Paramormyrops_kingsleyae
ENSACLG00000014192	si:dkey-33c12.4	53	38.813	ENSPMGG00000020251	zgc:123010	70	38.953	Periophthalmus_magnuspinnatus
ENSACLG00000014192	si:dkey-33c12.4	99	59.816	ENSPFOG00000009143	si:dkey-33c12.4	99	60.979	Poecilia_formosa
ENSACLG00000014192	si:dkey-33c12.4	53	42.571	ENSPFOG00000017092	-	84	38.995	Poecilia_formosa
ENSACLG00000014192	si:dkey-33c12.4	99	59.663	ENSPLAG00000022537	si:dkey-33c12.4	99	60.983	Poecilia_latipinna
ENSACLG00000014192	si:dkey-33c12.4	99	59.509	ENSPMEG00000015590	si:dkey-33c12.4	99	60.534	Poecilia_mexicana
ENSACLG00000014192	si:dkey-33c12.4	53	42.075	ENSPMEG00000009905	-	64	38.686	Poecilia_mexicana
ENSACLG00000014192	si:dkey-33c12.4	53	42.407	ENSPREG00000016861	-	66	38.756	Poecilia_reticulata
ENSACLG00000014192	si:dkey-33c12.4	64	39.623	ENSPNYG00000001047	-	74	36.920	Pundamilia_nyererei
ENSACLG00000014192	si:dkey-33c12.4	100	98.131	ENSPNYG00000018262	si:dkey-33c12.4	100	99.245	Pundamilia_nyererei
ENSACLG00000014192	si:dkey-33c12.4	58	31.854	ENSPNAG00000007579	zgc:123010	59	32.708	Pygocentrus_nattereri
ENSACLG00000014192	si:dkey-33c12.4	95	37.520	ENSPNAG00000018386	si:dkey-33c12.4	56	44.304	Pygocentrus_nattereri
ENSACLG00000014192	si:dkey-33c12.4	88	38.276	ENSSFOG00015009199	-	79	37.383	Scleropages_formosus
ENSACLG00000014192	si:dkey-33c12.4	57	42.276	ENSSFOG00015005186	-	54	43.094	Scleropages_formosus
ENSACLG00000014192	si:dkey-33c12.4	69	31.613	ENSSFOG00015021394	zgc:123010	84	31.206	Scleropages_formosus
ENSACLG00000014192	si:dkey-33c12.4	77	34.766	ENSSMAG00000010960	-	55	41.989	Scophthalmus_maximus
ENSACLG00000014192	si:dkey-33c12.4	99	59.815	ENSSMAG00000008147	si:dkey-33c12.4	99	60.688	Scophthalmus_maximus
ENSACLG00000014192	si:dkey-33c12.4	64	40.749	ENSSDUG00000010976	-	72	37.263	Seriola_dumerili
ENSACLG00000014192	si:dkey-33c12.4	58	31.937	ENSSDUG00000008651	zgc:123010	58	32.533	Seriola_dumerili
ENSACLG00000014192	si:dkey-33c12.4	99	64.431	ENSSDUG00000003213	si:dkey-33c12.4	99	65.309	Seriola_dumerili
ENSACLG00000014192	si:dkey-33c12.4	76	36.145	ENSSLDG00000012846	-	75	36.475	Seriola_lalandi_dorsalis
ENSACLG00000014192	si:dkey-33c12.4	58	31.937	ENSSLDG00000019386	zgc:123010	61	32.796	Seriola_lalandi_dorsalis
ENSACLG00000014192	si:dkey-33c12.4	99	64.587	ENSSLDG00000009448	si:dkey-33c12.4	99	65.402	Seriola_lalandi_dorsalis
ENSACLG00000014192	si:dkey-33c12.4	75	35.438	ENSSPAG00000004843	-	52	43.137	Stegastes_partitus
ENSACLG00000014192	si:dkey-33c12.4	100	64.643	ENSSPAG00000022577	-	100	66.373	Stegastes_partitus
ENSACLG00000014192	si:dkey-33c12.4	58	32.723	ENSSPAG00000013621	zgc:123010	58	33.602	Stegastes_partitus
ENSACLG00000014192	si:dkey-33c12.4	62	54.839	ENSTRUG00000022374	si:dkey-33c12.4	94	45.560	Takifugu_rubripes
ENSACLG00000014192	si:dkey-33c12.4	73	32.976	ENSTRUG00000000057	-	66	34.058	Takifugu_rubripes
ENSACLG00000014192	si:dkey-33c12.4	56	30.400	ENSTNIG00000001303	zgc:123010	91	30.728	Tetraodon_nigroviridis
ENSACLG00000014192	si:dkey-33c12.4	56	31.383	ENSXCOG00000012281	zgc:123010	72	31.635	Xiphophorus_couchianus
ENSACLG00000014192	si:dkey-33c12.4	99	60.559	ENSXMAG00000018535	si:dkey-33c12.4	99	61.562	Xiphophorus_maculatus