EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSACLG00000014260 (Gene tree)
Gene ID: 113015291
Gene Symbol: sf3b4
Alias: chunp6902|fb36a04|wu:fb36a04
Full Name: splicing factor 3b subunit 4
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 7299 bases
Position: chr22:14908606-14915904
Accession: 113015291
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000020963	RRM_1	PF00076.22	3.7e-39	1	2
ENSACLP00000020963	RRM_1	PF00076.22	3.7e-39	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000021441	-	4409	-	ENSACLP00000020963	401 (aa)	XP_026013032	UPI000329FA7F

Gene Model

Click here to download ENSACLG00000014260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000014260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSACLG00000014260	sf3b4	52	40.123	ENSACLG00000024791	pabpc1l	60	40.123

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000014260	sf3b4	76	81.505	ENSG00000143368	SF3B4	99	95.767	Homo_sapiens
ENSACLG00000014260	sf3b4	72	95.172	ENSAPOG00000017647	sf3b4	73	95.172	Acanthochromis_polyacanthus
ENSACLG00000014260	sf3b4	76	81.505	ENSAMEG00000010073	SF3B4	57	95.833	Ailuropoda_melanoleuca
ENSACLG00000014260	sf3b4	69	86.691	ENSACIG00000018455	sf3b4	70	98.734	Amphilophus_citrinellus
ENSACLG00000014260	sf3b4	72	94.483	ENSAOCG00000019801	sf3b4	73	94.483	Amphiprion_ocellaris
ENSACLG00000014260	sf3b4	72	94.483	ENSAPEG00000010365	sf3b4	73	94.483	Amphiprion_percula
ENSACLG00000014260	sf3b4	60	97.917	ENSATEG00000012844	sf3b4	67	95.522	Anabas_testudineus
ENSACLG00000014260	sf3b4	53	100.000	ENSACAG00000010019	SF3B4	57	96.203	Anolis_carolinensis
ENSACLG00000014260	sf3b4	76	81.505	ENSANAG00000031025	SF3B4	57	95.833	Aotus_nancymaae
ENSACLG00000014260	sf3b4	60	98.750	ENSAMXG00000008282	sf3b4	60	98.750	Astyanax_mexicanus
ENSACLG00000014260	sf3b4	76	81.505	ENSBTAG00000012495	SF3B4	57	95.833	Bos_taurus
ENSACLG00000014260	sf3b4	53	93.925	ENSBTAG00000012793	-	53	93.925	Bos_taurus
ENSACLG00000014260	sf3b4	60	95.833	ENSCAFG00000011617	SF3B4	57	95.833	Canis_familiaris
ENSACLG00000014260	sf3b4	60	95.833	ENSCAFG00020019775	SF3B4	57	95.833	Canis_lupus_dingo
ENSACLG00000014260	sf3b4	73	59.539	ENSCHIG00000006654	-	50	74.627	Capra_hircus
ENSACLG00000014260	sf3b4	76	81.505	ENSCHIG00000025663	-	57	95.833	Capra_hircus
ENSACLG00000014260	sf3b4	76	81.505	ENSTSYG00000009295	SF3B4	57	95.833	Carlito_syrichta
ENSACLG00000014260	sf3b4	58	93.548	ENSCAPG00000006451	SF3B4	51	94.475	Cavia_aperea
ENSACLG00000014260	sf3b4	60	95.833	ENSCPOG00000008267	SF3B4	57	95.833	Cavia_porcellus
ENSACLG00000014260	sf3b4	60	95.000	ENSCCAG00000021751	-	54	95.000	Cebus_capucinus
ENSACLG00000014260	sf3b4	75	70.476	ENSCCAG00000019823	-	51	85.981	Cebus_capucinus
ENSACLG00000014260	sf3b4	76	81.505	ENSCATG00000033114	SF3B4	57	95.833	Cercocebus_atys
ENSACLG00000014260	sf3b4	60	95.833	ENSCLAG00000015851	SF3B4	57	95.833	Chinchilla_lanigera
ENSACLG00000014260	sf3b4	76	81.505	ENSCSAG00000018129	SF3B4	57	95.833	Chlorocebus_sabaeus
ENSACLG00000014260	sf3b4	53	100.000	ENSCPBG00000008041	SF3B4	57	95.781	Chrysemys_picta_bellii
ENSACLG00000014260	sf3b4	56	88.393	ENSCING00000002337	-	57	90.610	Ciona_intestinalis
ENSACLG00000014260	sf3b4	52	91.429	ENSCSAVG00000007809	-	89	89.820	Ciona_savignyi
ENSACLG00000014260	sf3b4	76	81.505	ENSCANG00000035579	SF3B4	57	95.833	Colobus_angolensis_palliatus
ENSACLG00000014260	sf3b4	60	95.833	ENSCGRG00001003590	Sf3b4	57	95.833	Cricetulus_griseus_chok1gshd
ENSACLG00000014260	sf3b4	60	95.833	ENSCGRG00000016914	Sf3b4	57	95.833	Cricetulus_griseus_crigri
ENSACLG00000014260	sf3b4	67	94.757	ENSCVAG00000005536	sf3b4	69	92.910	Cyprinodon_variegatus
ENSACLG00000014260	sf3b4	60	97.917	ENSDARG00000018574	sf3b4	67	94.776	Danio_rerio
ENSACLG00000014260	sf3b4	74	77.170	ENSDNOG00000048908	-	54	92.478	Dasypus_novemcinctus
ENSACLG00000014260	sf3b4	97	65.750	ENSDNOG00000037231	-	50	87.245	Dasypus_novemcinctus
ENSACLG00000014260	sf3b4	76	81.505	ENSDORG00000016366	Sf3b4	57	95.833	Dipodomys_ordii
ENSACLG00000014260	sf3b4	57	87.719	ENSETEG00000008963	SF3B4	56	86.076	Echinops_telfairi
ENSACLG00000014260	sf3b4	76	81.505	ENSEASG00005001477	SF3B4	57	95.833	Equus_asinus_asinus
ENSACLG00000014260	sf3b4	76	81.505	ENSECAG00000024737	SF3B4	57	95.833	Equus_caballus
ENSACLG00000014260	sf3b4	87	86.571	ENSELUG00000012876	sf3b4	67	95.149	Esox_lucius
ENSACLG00000014260	sf3b4	76	81.505	ENSFCAG00000010106	SF3B4	57	95.833	Felis_catus
ENSACLG00000014260	sf3b4	60	95.833	ENSFDAG00000009286	SF3B4	57	95.833	Fukomys_damarensis
ENSACLG00000014260	sf3b4	57	97.826	ENSGMOG00000002519	sf3b4	70	96.203	Gadus_morhua
ENSACLG00000014260	sf3b4	53	100.000	ENSGALG00000013352	SF3B4	57	95.781	Gallus_gallus
ENSACLG00000014260	sf3b4	70	91.815	ENSGAFG00000010181	sf3b4	73	91.696	Gambusia_affinis
ENSACLG00000014260	sf3b4	56	99.558	ENSGACG00000003819	sf3b4	60	97.046	Gasterosteus_aculeatus
ENSACLG00000014260	sf3b4	53	100.000	ENSGAGG00000025055	SF3B4	50	95.781	Gopherus_agassizii
ENSACLG00000014260	sf3b4	76	69.968	ENSGGOG00000038845	-	54	89.151	Gorilla_gorilla
ENSACLG00000014260	sf3b4	76	81.505	ENSGGOG00000004761	SF3B4	57	95.833	Gorilla_gorilla
ENSACLG00000014260	sf3b4	100	100.000	ENSHBUG00000002028	sf3b4	100	100.000	Haplochromis_burtoni
ENSACLG00000014260	sf3b4	60	95.833	ENSHGLG00000012360	SF3B4	57	95.833	Heterocephalus_glaber_female
ENSACLG00000014260	sf3b4	60	95.833	ENSHGLG00100008533	SF3B4	57	95.833	Heterocephalus_glaber_male
ENSACLG00000014260	sf3b4	57	97.357	ENSHCOG00000003014	sf3b4	59	95.359	Hippocampus_comes
ENSACLG00000014260	sf3b4	69	94.203	ENSIPUG00000012242	Sf3b4	67	95.522	Ictalurus_punctatus
ENSACLG00000014260	sf3b4	95	58.462	ENSSTOG00000029627	-	52	73.043	Ictidomys_tridecemlineatus
ENSACLG00000014260	sf3b4	76	81.505	ENSSTOG00000000684	-	57	95.833	Ictidomys_tridecemlineatus
ENSACLG00000014260	sf3b4	75	59.551	ENSJJAG00000022500	Sf3b4	59	70.068	Jaculus_jaculus
ENSACLG00000014260	sf3b4	94	89.153	ENSKMAG00000008154	sf3b4	84	91.239	Kryptolebias_marmoratus
ENSACLG00000014260	sf3b4	58	98.276	ENSLBEG00000026818	sf3b4	59	97.468	Labrus_bergylta
ENSACLG00000014260	sf3b4	60	94.167	ENSLACG00000004436	SF3B4	66	94.167	Latimeria_chalumnae
ENSACLG00000014260	sf3b4	57	99.127	ENSLOCG00000009048	sf3b4	56	96.624	Lepisosteus_oculatus
ENSACLG00000014260	sf3b4	76	80.000	ENSLAFG00000008531	SF3B4	56	95.833	Loxodonta_africana
ENSACLG00000014260	sf3b4	76	81.505	ENSMFAG00000042395	SF3B4	57	95.833	Macaca_fascicularis
ENSACLG00000014260	sf3b4	89	62.604	ENSMFAG00000039067	-	60	77.679	Macaca_fascicularis
ENSACLG00000014260	sf3b4	76	81.505	ENSMMUG00000007256	SF3B4	57	95.833	Macaca_mulatta
ENSACLG00000014260	sf3b4	89	62.050	ENSMNEG00000031526	-	60	77.232	Macaca_nemestrina
ENSACLG00000014260	sf3b4	76	81.505	ENSMNEG00000031839	SF3B4	57	95.833	Macaca_nemestrina
ENSACLG00000014260	sf3b4	76	81.505	ENSMLEG00000038667	SF3B4	57	95.833	Mandrillus_leucophaeus
ENSACLG00000014260	sf3b4	60	98.333	ENSMAMG00000014692	sf3b4	66	96.970	Mastacembelus_armatus
ENSACLG00000014260	sf3b4	100	100.000	ENSMZEG00005026741	sf3b4	100	100.000	Maylandia_zebra
ENSACLG00000014260	sf3b4	53	100.000	ENSMGAG00000000653	SF3B4	57	95.781	Meleagris_gallopavo
ENSACLG00000014260	sf3b4	60	95.833	ENSMAUG00000015266	Sf3b4	57	95.833	Mesocricetus_auratus
ENSACLG00000014260	sf3b4	76	81.505	ENSMICG00000044961	SF3B4	57	95.833	Microcebus_murinus
ENSACLG00000014260	sf3b4	76	79.624	ENSMOCG00000013658	-	57	95.833	Microtus_ochrogaster
ENSACLG00000014260	sf3b4	92	72.093	ENSMOCG00000014155	-	57	93.506	Microtus_ochrogaster
ENSACLG00000014260	sf3b4	76	81.505	ENSMODG00000018767	SF3B4	57	95.833	Monodelphis_domestica
ENSACLG00000014260	sf3b4	66	95.833	ENSMALG00000006174	sf3b4	66	95.833	Monopterus_albus
ENSACLG00000014260	sf3b4	76	80.878	MGP_CAROLIEiJ_G0025365	Sf3b4	57	95.833	Mus_caroli
ENSACLG00000014260	sf3b4	60	95.833	ENSMUSG00000068856	Sf3b4	57	95.833	Mus_musculus
ENSACLG00000014260	sf3b4	60	95.833	MGP_PahariEiJ_G0026809	Sf3b4	57	95.833	Mus_pahari
ENSACLG00000014260	sf3b4	60	95.833	MGP_SPRETEiJ_G0026309	Sf3b4	57	95.833	Mus_spretus
ENSACLG00000014260	sf3b4	76	81.505	ENSMPUG00000005563	SF3B4	57	95.833	Mustela_putorius_furo
ENSACLG00000014260	sf3b4	76	81.505	ENSMLUG00000010789	SF3B4	57	95.833	Myotis_lucifugus
ENSACLG00000014260	sf3b4	76	81.191	ENSNGAG00000016337	Sf3b4	57	95.833	Nannospalax_galili
ENSACLG00000014260	sf3b4	100	99.252	ENSNBRG00000013865	sf3b4	100	99.252	Neolamprologus_brichardi
ENSACLG00000014260	sf3b4	90	68.267	ENSNLEG00000000537	-	60	86.498	Nomascus_leucogenys
ENSACLG00000014260	sf3b4	57	93.421	ENSOPRG00000010808	SF3B4	56	91.561	Ochotona_princeps
ENSACLG00000014260	sf3b4	76	68.139	ENSODEG00000003597	-	59	79.668	Octodon_degus
ENSACLG00000014260	sf3b4	91	59.524	ENSODEG00000008916	-	60	70.886	Octodon_degus
ENSACLG00000014260	sf3b4	100	99.002	ENSONIG00000002730	sf3b4	100	99.002	Oreochromis_niloticus
ENSACLG00000014260	sf3b4	65	71.642	ENSOANG00000004768	-	50	81.944	Ornithorhynchus_anatinus
ENSACLG00000014260	sf3b4	76	81.505	ENSOCUG00000004614	SF3B4	57	95.833	Oryctolagus_cuniculus
ENSACLG00000014260	sf3b4	74	91.030	ENSORLG00000003062	sf3b4	61	98.312	Oryzias_latipes
ENSACLG00000014260	sf3b4	74	91.030	ENSORLG00020000687	sf3b4	59	98.312	Oryzias_latipes_hni
ENSACLG00000014260	sf3b4	74	91.030	ENSORLG00015010989	sf3b4	59	98.312	Oryzias_latipes_hsok
ENSACLG00000014260	sf3b4	58	98.276	ENSOMEG00000013694	sf3b4	60	97.890	Oryzias_melastigma
ENSACLG00000014260	sf3b4	76	81.505	ENSOGAG00000006265	SF3B4	57	95.833	Otolemur_garnettii
ENSACLG00000014260	sf3b4	71	72.297	ENSOARG00000007368	-	57	79.399	Ovis_aries
ENSACLG00000014260	sf3b4	76	81.505	ENSOARG00000020718	-	57	95.833	Ovis_aries
ENSACLG00000014260	sf3b4	99	65.686	ENSPPAG00000030024	-	59	85.833	Pan_paniscus
ENSACLG00000014260	sf3b4	76	81.505	ENSPPAG00000040904	SF3B4	57	95.833	Pan_paniscus
ENSACLG00000014260	sf3b4	76	81.505	ENSPPRG00000007384	SF3B4	57	95.833	Panthera_pardus
ENSACLG00000014260	sf3b4	76	81.505	ENSPTIG00000014530	SF3B4	57	95.833	Panthera_tigris_altaica
ENSACLG00000014260	sf3b4	76	81.505	ENSPTRG00000001243	SF3B4	57	95.833	Pan_troglodytes
ENSACLG00000014260	sf3b4	76	76.623	ENSPTRG00000049727	-	60	86.250	Pan_troglodytes
ENSACLG00000014260	sf3b4	76	81.505	ENSPANG00000005126	SF3B4	57	95.833	Papio_anubis
ENSACLG00000014260	sf3b4	61	97.119	ENSPKIG00000020669	sf3b4	71	94.403	Paramormyrops_kingsleyae
ENSACLG00000014260	sf3b4	66	78.030	ENSPSIG00000009565	SF3B4	71	94.330	Pelodiscus_sinensis
ENSACLG00000014260	sf3b4	60	95.833	ENSPEMG00000017568	Sf3b4	57	95.833	Peromyscus_maniculatus_bairdii
ENSACLG00000014260	sf3b4	53	95.305	ENSPMAG00000007842	-	55	90.717	Petromyzon_marinus
ENSACLG00000014260	sf3b4	76	81.505	ENSPCIG00000008765	SF3B4	57	95.833	Phascolarctos_cinereus
ENSACLG00000014260	sf3b4	70	93.238	ENSPFOG00000005754	sf3b4	71	93.238	Poecilia_formosa
ENSACLG00000014260	sf3b4	70	93.238	ENSPLAG00000001401	sf3b4	78	93.238	Poecilia_latipinna
ENSACLG00000014260	sf3b4	70	91.103	ENSPREG00000011076	sf3b4	70	92.527	Poecilia_reticulata
ENSACLG00000014260	sf3b4	52	96.635	ENSPCAG00000000392	SF3B4	50	96.635	Procavia_capensis
ENSACLG00000014260	sf3b4	76	81.505	ENSPCOG00000015399	SF3B4	57	95.833	Propithecus_coquereli
ENSACLG00000014260	sf3b4	76	81.505	ENSPVAG00000014171	SF3B4	57	95.833	Pteropus_vampyrus
ENSACLG00000014260	sf3b4	100	100.000	ENSPNYG00000012700	sf3b4	100	100.000	Pundamilia_nyererei
ENSACLG00000014260	sf3b4	60	97.917	ENSPNAG00000000686	sf3b4	68	95.149	Pygocentrus_nattereri
ENSACLG00000014260	sf3b4	60	95.833	ENSRNOG00000021181	Sf3b4	57	95.833	Rattus_norvegicus
ENSACLG00000014260	sf3b4	76	81.505	ENSRBIG00000043392	SF3B4	57	95.833	Rhinopithecus_bieti
ENSACLG00000014260	sf3b4	76	81.505	ENSRROG00000029366	SF3B4	57	95.833	Rhinopithecus_roxellana
ENSACLG00000014260	sf3b4	92	58.639	ENSRROG00000028213	-	58	72.926	Rhinopithecus_roxellana
ENSACLG00000014260	sf3b4	76	81.191	ENSSBOG00000012310	-	57	95.417	Saimiri_boliviensis_boliviensis
ENSACLG00000014260	sf3b4	97	56.790	ENSSBOG00000025174	-	51	74.262	Saimiri_boliviensis_boliviensis
ENSACLG00000014260	sf3b4	76	78.056	ENSSHAG00000004043	SF3B4	56	91.250	Sarcophilus_harrisii
ENSACLG00000014260	sf3b4	61	97.119	ENSSFOG00015008864	sf3b4	66	94.403	Scleropages_formosus
ENSACLG00000014260	sf3b4	85	92.962	ENSSMAG00000006837	sf3b4	67	95.865	Scophthalmus_maximus
ENSACLG00000014260	sf3b4	66	96.241	ENSSDUG00000012064	sf3b4	67	95.896	Seriola_dumerili
ENSACLG00000014260	sf3b4	66	95.865	ENSSLDG00000014226	sf3b4	66	95.865	Seriola_lalandi_dorsalis
ENSACLG00000014260	sf3b4	60	97.500	ENSSPAG00000019219	sf3b4	67	95.149	Stegastes_partitus
ENSACLG00000014260	sf3b4	79	55.000	ENSSSCG00000039440	-	58	62.447	Sus_scrofa
ENSACLG00000014260	sf3b4	76	80.251	ENSSSCG00000006665	-	57	95.833	Sus_scrofa
ENSACLG00000014260	sf3b4	60	94.628	ENSTGUG00000004470	SF3B4	93	95.781	Taeniopygia_guttata
ENSACLG00000014260	sf3b4	79	89.590	ENSTRUG00000004516	sf3b4	60	96.624	Takifugu_rubripes
ENSACLG00000014260	sf3b4	57	98.696	ENSTNIG00000009156	sf3b4	61	97.468	Tetraodon_nigroviridis
ENSACLG00000014260	sf3b4	76	81.505	ENSTTRG00000005217	SF3B4	57	95.833	Tursiops_truncatus
ENSACLG00000014260	sf3b4	76	81.505	ENSUAMG00000022468	SF3B4	57	95.833	Ursus_americanus
ENSACLG00000014260	sf3b4	93	71.899	ENSUMAG00000003802	SF3B4	57	95.833	Ursus_maritimus
ENSACLG00000014260	sf3b4	73	80.782	ENSVPAG00000008152	SF3B4	55	95.614	Vicugna_pacos
ENSACLG00000014260	sf3b4	60	95.833	ENSVVUG00000007732	-	61	95.833	Vulpes_vulpes
ENSACLG00000014260	sf3b4	76	79.934	ENSXETG00000011038	sf3b4	59	94.595	Xenopus_tropicalis
ENSACLG00000014260	sf3b4	66	94.361	ENSXCOG00000019895	sf3b4	68	94.361	Xiphophorus_couchianus
ENSACLG00000014260	sf3b4	70	92.171	ENSXMAG00000003772	sf3b4	74	92.042	Xiphophorus_maculatus