EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSACLG00000014484 (Gene tree)
Gene ID
113006612
Gene Symbol
cpsf3
Alias
si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Astatotilapia_calliptera
Status
putative
Strand
Minus strand
Length
7731 bases
Position
chr15:25836631-25844361
Accession
ZDB-GENE-030131-3275
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSACLP00000021369CPSF73-100_CPF11718.88.2e-5311
ENSACLP00000021431CPSF73-100_CPF11718.89.4e-5311
ENSACLP00000021557CPSF73-100_CPF11718.84.9e-5111
ENSACLP00000021557Beta-CaspPF10996.81.2e-3311
ENSACLP00000021369Beta-CaspPF10996.81.3e-3311
ENSACLP00000021431Beta-CaspPF10996.83.7e-3311
ENSACLP00000021369Lactamase_BPF00753.272.2e-1811
ENSACLP00000021431Lactamase_BPF00753.272.5e-1811
ENSACLP00000021557Lactamase_BPF00753.275.6e-0811
ENSACLP00000021557RMMBLPF07521.122e-2111
ENSACLP00000021369RMMBLPF07521.122.2e-2111
ENSACLP00000021431RMMBLPF07521.122.4e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSACLT00000021862-2716-ENSACLP00000021369665 (aa)--
ENSACLT00000022055-1881-ENSACLP00000021557626 (aa)--
ENSACLT00000021916-2373-ENSACLP00000021431712 (aa)--
Gene Model
Click here to download ENSACLG00000014484's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000014484's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSACLG00000014484cpsf37238.008ENSACLG00000018782ints118137.076
ENSACLG00000014484cpsf39986.614ENSACLG00000018846CPSF39986.614
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSACLG00000014484cpsf39985.714ENSG00000119203CPSF310098.529Homo_sapiens
ENSACLG00000014484cpsf39995.619ENSAPOG00000022087cpsf39795.619Acanthochromis_polyacanthus
ENSACLG00000014484cpsf37397.320ENSAPOG00000012241CPSF38996.581Acanthochromis_polyacanthus
ENSACLG00000014484cpsf39985.865ENSAMEG00000008493CPSF39785.865Ailuropoda_melanoleuca
ENSACLG00000014484cpsf39986.614ENSACIG00000023663CPSF39986.614Amphilophus_citrinellus
ENSACLG00000014484cpsf310094.620ENSACIG00000009846cpsf310094.620Amphilophus_citrinellus
ENSACLG00000014484cpsf39989.006ENSAOCG00000010077CPSF39986.699Amphiprion_ocellaris
ENSACLG00000014484cpsf39995.619ENSAOCG00000022056cpsf39795.619Amphiprion_ocellaris
ENSACLG00000014484cpsf39995.770ENSAPEG00000019526cpsf310093.291Amphiprion_percula
ENSACLG00000014484cpsf39989.006ENSAPEG00000021167CPSF39986.699Amphiprion_percula
ENSACLG00000014484cpsf39984.187ENSATEG00000014525CPSF39684.187Anabas_testudineus
ENSACLG00000014484cpsf39995.152ENSATEG00000003959cpsf39992.320Anabas_testudineus
ENSACLG00000014484cpsf39985.886ENSAPLG00000006941CPSF39885.886Anas_platyrhynchos
ENSACLG00000014484cpsf39981.616ENSACAG00000001759CPSF39983.438Anolis_carolinensis
ENSACLG00000014484cpsf39981.353ENSANAG00000031254CPSF39881.353Aotus_nancymaae
ENSACLG00000014484cpsf39986.898ENSAMXG00000004786cpsf39985.032Astyanax_mexicanus
ENSACLG00000014484cpsf39985.865ENSBTAG00000019735CPSF39785.865Bos_taurus
ENSACLG00000014484cpsf39157.878WBGene00013460cpsf-38757.878Caenorhabditis_elegans
ENSACLG00000014484cpsf39985.564ENSCJAG00000006276CPSF39885.564Callithrix_jacchus
ENSACLG00000014484cpsf39985.865ENSCAFG00000003375CPSF39385.865Canis_familiaris
ENSACLG00000014484cpsf39088.704ENSCAFG00020026799CPSF39788.704Canis_lupus_dingo
ENSACLG00000014484cpsf39985.865ENSCHIG00000013973CPSF39785.865Capra_hircus
ENSACLG00000014484cpsf39985.714ENSTSYG00000002967CPSF39785.714Carlito_syrichta
ENSACLG00000014484cpsf39986.015ENSCAPG00000013851CPSF39986.015Cavia_aperea
ENSACLG00000014484cpsf39986.015ENSCPOG00000011299CPSF39786.015Cavia_porcellus
ENSACLG00000014484cpsf39985.564ENSCCAG00000036730CPSF39985.457Cebus_capucinus
ENSACLG00000014484cpsf39983.759ENSCATG00000014770CPSF39791.489Cercocebus_atys
ENSACLG00000014484cpsf39986.015ENSCLAG00000002727CPSF39786.015Chinchilla_lanigera
ENSACLG00000014484cpsf38895.820ENSCSAG00000007125CPSF39995.820Chlorocebus_sabaeus
ENSACLG00000014484cpsf388100.000ENSCHOG00000000180CPSF38561.268Choloepus_hoffmanni
ENSACLG00000014484cpsf39986.015ENSCPBG00000014074CPSF39686.015Chrysemys_picta_bellii
ENSACLG00000014484cpsf39968.161ENSCING00000007214-9668.161Ciona_intestinalis
ENSACLG00000014484cpsf39975.522ENSCANG00000034435CPSF39775.522Colobus_angolensis_palliatus
ENSACLG00000014484cpsf39985.414ENSCGRG00001013134Cpsf39785.414Cricetulus_griseus_chok1gshd
ENSACLG00000014484cpsf39985.414ENSCGRG00000018319Cpsf39785.414Cricetulus_griseus_crigri
ENSACLG00000014484cpsf39987.669ENSCSEG00000002021CPSF39987.287Cynoglossus_semilaevis
ENSACLG00000014484cpsf39988.253ENSCVAG00000015067CPSF39688.253Cyprinodon_variegatus
ENSACLG00000014484cpsf39986.937ENSDARG00000027649cpsf39786.937Danio_rerio
ENSACLG00000014484cpsf39984.685ENSDNOG00000008940CPSF39384.685Dasypus_novemcinctus
ENSACLG00000014484cpsf39587.539ENSDORG00000014263Cpsf39787.539Dipodomys_ordii
ENSACLG00000014484cpsf39967.922FBgn0261065Cpsf739767.922Drosophila_melanogaster
ENSACLG00000014484cpsf39277.162ENSETEG00000003893CPSF39477.162Echinops_telfairi
ENSACLG00000014484cpsf39976.462ENSEBUG00000009018cpsf39676.462Eptatretus_burgeri
ENSACLG00000014484cpsf39985.865ENSEASG00005003970CPSF39785.865Equus_asinus_asinus
ENSACLG00000014484cpsf39985.865ENSECAG00000019911CPSF39491.176Equus_caballus
ENSACLG00000014484cpsf39970.526ENSEEUG00000015422CPSF39770.526Erinaceus_europaeus
ENSACLG00000014484cpsf39990.526ENSELUG00000013775cpsf39989.666Esox_lucius
ENSACLG00000014484cpsf39985.865ENSFCAG00000007852CPSF39985.426Felis_catus
ENSACLG00000014484cpsf39785.162ENSFALG00000006572CPSF310085.162Ficedula_albicollis
ENSACLG00000014484cpsf39985.714ENSFDAG00000006317CPSF39785.714Fukomys_damarensis
ENSACLG00000014484cpsf39993.051ENSFHEG00000014774cpsf39793.051Fundulus_heteroclitus
ENSACLG00000014484cpsf35092.308ENSFHEG00000012186CPSF39892.308Fundulus_heteroclitus
ENSACLG00000014484cpsf39990.827ENSGMOG00000003157cpsf39790.827Gadus_morhua
ENSACLG00000014484cpsf39985.457ENSGALG00000016424CPSF39984.724Gallus_gallus
ENSACLG00000014484cpsf310092.846ENSGAFG00000019449cpsf310092.846Gambusia_affinis
ENSACLG00000014484cpsf39988.589ENSGAFG00000008016CPSF39788.589Gambusia_affinis
ENSACLG00000014484cpsf37380.942ENSGAGG00000025583CPSF39381.370Gopherus_agassizii
ENSACLG00000014484cpsf39983.529ENSGGOG00000001757CPSF38896.896Gorilla_gorilla
ENSACLG00000014484cpsf3100100.000ENSHBUG00000001188cpsf3100100.000Haplochromis_burtoni
ENSACLG00000014484cpsf36379.602ENSHBUG00000014332CPSF310080.000Haplochromis_burtoni
ENSACLG00000014484cpsf39985.564ENSHGLG00000000666CPSF39685.564Heterocephalus_glaber_female
ENSACLG00000014484cpsf39985.564ENSHGLG00100007765CPSF39685.564Heterocephalus_glaber_male
ENSACLG00000014484cpsf39992.273ENSHCOG00000007251cpsf39692.273Hippocampus_comes
ENSACLG00000014484cpsf39987.349ENSHCOG00000015957CPSF39983.754Hippocampus_comes
ENSACLG00000014484cpsf39987.801ENSIPUG00000023488cpsf39985.601Ictalurus_punctatus
ENSACLG00000014484cpsf39985.414ENSSTOG00000004476CPSF39785.414Ictidomys_tridecemlineatus
ENSACLG00000014484cpsf39985.157ENSJJAG00000023415Cpsf39885.157Jaculus_jaculus
ENSACLG00000014484cpsf39987.801ENSKMAG00000007317CPSF39687.801Kryptolebias_marmoratus
ENSACLG00000014484cpsf39994.260ENSKMAG00000002806cpsf39794.260Kryptolebias_marmoratus
ENSACLG00000014484cpsf39689.151ENSLBEG00000013492CPSF39689.151Labrus_bergylta
ENSACLG00000014484cpsf35990.217ENSLBEG00000015018-9990.217Labrus_bergylta
ENSACLG00000014484cpsf39985.606ENSLBEG00000020569cpsf39682.278Labrus_bergylta
ENSACLG00000014484cpsf39980.030ENSLACG00000008308CPSF39680.030Latimeria_chalumnae
ENSACLG00000014484cpsf39986.846ENSLOCG00000016823cpsf39786.846Lepisosteus_oculatus
ENSACLG00000014484cpsf39985.865ENSLAFG00000009467CPSF39885.865Loxodonta_africana
ENSACLG00000014484cpsf39985.564ENSMFAG00000001339CPSF39193.991Macaca_fascicularis
ENSACLG00000014484cpsf39983.121ENSMMUG00000018038CPSF39985.116Macaca_mulatta
ENSACLG00000014484cpsf39097.034ENSMNEG00000039447CPSF39996.032Macaca_nemestrina
ENSACLG00000014484cpsf39985.714ENSMLEG00000026825CPSF39096.681Mandrillus_leucophaeus
ENSACLG00000014484cpsf39993.656ENSMAMG00000003076cpsf39793.656Mastacembelus_armatus
ENSACLG00000014484cpsf39986.984ENSMAMG00000008835CPSF39986.984Mastacembelus_armatus
ENSACLG00000014484cpsf39988.288ENSMZEG00005006258CPSF39986.614Maylandia_zebra
ENSACLG00000014484cpsf3100100.000ENSMZEG00005014358cpsf3100100.000Maylandia_zebra
ENSACLG00000014484cpsf39985.457ENSMGAG00000013995CPSF310085.457Meleagris_gallopavo
ENSACLG00000014484cpsf35875.401ENSMAUG00000000166Cpsf39976.075Mesocricetus_auratus
ENSACLG00000014484cpsf39981.109ENSMICG00000002363CPSF39980.156Microcebus_murinus
ENSACLG00000014484cpsf39982.256ENSMOCG00000020067Cpsf39782.256Microtus_ochrogaster
ENSACLG00000014484cpsf37878.014ENSMMOG00000011923CPSF38578.014Mola_mola
ENSACLG00000014484cpsf39885.831ENSMMOG00000018212CPSF39886.739Mola_mola
ENSACLG00000014484cpsf39984.077ENSMODG00000014703CPSF39784.077Monodelphis_domestica
ENSACLG00000014484cpsf39994.864ENSMALG00000016416cpsf310092.197Monopterus_albus
ENSACLG00000014484cpsf39684.539ENSMALG00000011474CPSF39983.937Monopterus_albus
ENSACLG00000014484cpsf39985.714MGP_CAROLIEiJ_G0017640Cpsf39785.714Mus_caroli
ENSACLG00000014484cpsf39985.714ENSMUSG00000054309Cpsf39697.034Mus_musculus
ENSACLG00000014484cpsf39985.564MGP_PahariEiJ_G0029397Cpsf39785.564Mus_pahari
ENSACLG00000014484cpsf39985.714MGP_SPRETEiJ_G0018481Cpsf39785.714Mus_spretus
ENSACLG00000014484cpsf39986.036ENSMPUG00000013213CPSF39786.036Mustela_putorius_furo
ENSACLG00000014484cpsf39985.736ENSMLUG00000010636CPSF39785.736Myotis_lucifugus
ENSACLG00000014484cpsf39985.414ENSNGAG00000019836Cpsf39785.414Nannospalax_galili
ENSACLG00000014484cpsf310099.201ENSNBRG00000004770cpsf310099.201Neolamprologus_brichardi
ENSACLG00000014484cpsf39986.614ENSNBRG00000010525CPSF39986.614Neolamprologus_brichardi
ENSACLG00000014484cpsf39985.564ENSNLEG00000013359CPSF38896.896Nomascus_leucogenys
ENSACLG00000014484cpsf39953.344ENSMEUG00000013117-9164.683Notamacropus_eugenii
ENSACLG00000014484cpsf38795.635ENSOPRG00000008902CPSF39195.635Ochotona_princeps
ENSACLG00000014484cpsf39986.165ENSODEG00000003129CPSF39786.165Octodon_degus
ENSACLG00000014484cpsf39999.094ENSONIG00000018812cpsf39799.094Oreochromis_niloticus
ENSACLG00000014484cpsf38883.096ENSOANG00000008577CPSF39983.452Ornithorhynchus_anatinus
ENSACLG00000014484cpsf39985.865ENSOCUG00000003728CPSF39785.865Oryctolagus_cuniculus
ENSACLG00000014484cpsf39992.447ENSORLG00000018854cpsf39792.447Oryzias_latipes
ENSACLG00000014484cpsf39992.598ENSORLG00020013331cpsf310089.936Oryzias_latipes_hni
ENSACLG00000014484cpsf39992.447ENSORLG00015011017cpsf310089.936Oryzias_latipes_hsok
ENSACLG00000014484cpsf39992.598ENSOMEG00000010647cpsf39689.045Oryzias_melastigma
ENSACLG00000014484cpsf39975.639ENSOGAG00000001680CPSF39775.639Otolemur_garnettii
ENSACLG00000014484cpsf39985.865ENSOARG00000015073CPSF39785.865Ovis_aries
ENSACLG00000014484cpsf39985.714ENSPPAG00000042457CPSF38896.896Pan_paniscus
ENSACLG00000014484cpsf39985.865ENSPPRG00000016790CPSF39985.581Panthera_pardus
ENSACLG00000014484cpsf39985.865ENSPTIG00000003920CPSF39985.308Panthera_tigris_altaica
ENSACLG00000014484cpsf39985.714ENSPTRG00000011638CPSF38896.896Pan_troglodytes
ENSACLG00000014484cpsf39985.714ENSPANG00000016798CPSF39193.991Papio_anubis
ENSACLG00000014484cpsf39988.288ENSPKIG00000023646cpsf310087.926Paramormyrops_kingsleyae
ENSACLG00000014484cpsf39985.907ENSPSIG00000016144CPSF39885.907Pelodiscus_sinensis
ENSACLG00000014484cpsf36380.050ENSPMGG00000015311CPSF310080.050Periophthalmus_magnuspinnatus
ENSACLG00000014484cpsf310087.380ENSPMGG00000006141-9394.824Periophthalmus_magnuspinnatus
ENSACLG00000014484cpsf39985.414ENSPEMG00000017668Cpsf39785.564Peromyscus_maniculatus_bairdii
ENSACLG00000014484cpsf37889.443ENSPMAG00000004841cpsf39689.443Petromyzon_marinus
ENSACLG00000014484cpsf39985.263ENSPCIG00000009823CPSF39886.043Phascolarctos_cinereus
ENSACLG00000014484cpsf39988.288ENSPFOG00000010418-9788.288Poecilia_formosa
ENSACLG00000014484cpsf39993.353ENSPFOG00000015922cpsf310090.028Poecilia_formosa
ENSACLG00000014484cpsf39993.353ENSPLAG00000000882cpsf310090.028Poecilia_latipinna
ENSACLG00000014484cpsf36380.741ENSPLAG00000021300-10081.481Poecilia_latipinna
ENSACLG00000014484cpsf39993.505ENSPMEG00000018309cpsf310090.169Poecilia_mexicana
ENSACLG00000014484cpsf39982.432ENSPREG00000004482CPSF310079.469Poecilia_reticulata
ENSACLG00000014484cpsf310093.142ENSPREG00000014875cpsf310093.142Poecilia_reticulata
ENSACLG00000014484cpsf39981.353ENSPPYG00000012666CPSF39781.353Pongo_abelii
ENSACLG00000014484cpsf38366.935ENSPCAG00000015042CPSF39061.717Procavia_capensis
ENSACLG00000014484cpsf38885.818ENSPCOG00000023016CPSF39685.818Propithecus_coquereli
ENSACLG00000014484cpsf39985.736ENSPVAG00000005324CPSF39785.736Pteropus_vampyrus
ENSACLG00000014484cpsf3100100.000ENSPNYG00000004405cpsf3100100.000Pundamilia_nyererei
ENSACLG00000014484cpsf38891.971ENSPNYG00000021047CPSF39191.971Pundamilia_nyererei
ENSACLG00000014484cpsf39988.102ENSPNAG00000023060cpsf39986.593Pygocentrus_nattereri
ENSACLG00000014484cpsf39985.714ENSRNOG00000052418Cpsf39785.714Rattus_norvegicus
ENSACLG00000014484cpsf39980.150ENSRBIG00000041615CPSF39981.240Rhinopithecus_bieti
ENSACLG00000014484cpsf39985.714ENSRROG00000033792CPSF39885.714Rhinopithecus_roxellana
ENSACLG00000014484cpsf39141.051YLR277CYSH19041.051Saccharomyces_cerevisiae
ENSACLG00000014484cpsf39981.764ENSSBOG00000027263CPSF39781.764Saimiri_boliviensis_boliviensis
ENSACLG00000014484cpsf39985.414ENSSHAG00000007024CPSF39785.414Sarcophilus_harrisii
ENSACLG00000014484cpsf39988.138ENSSFOG00015002108cpsf310087.539Scleropages_formosus
ENSACLG00000014484cpsf39588.644ENSSMAG00000020534CPSF39784.795Scophthalmus_maximus
ENSACLG00000014484cpsf39988.404ENSSDUG00000018498CPSF39986.888Seriola_dumerili
ENSACLG00000014484cpsf39994.713ENSSDUG00000002828cpsf39494.713Seriola_dumerili
ENSACLG00000014484cpsf39988.404ENSSLDG00000005234CPSF39987.420Seriola_lalandi_dorsalis
ENSACLG00000014484cpsf39994.411ENSSLDG00000008469cpsf39494.411Seriola_lalandi_dorsalis
ENSACLG00000014484cpsf39083.366ENSSARG00000005186CPSF38883.366Sorex_araneus
ENSACLG00000014484cpsf39984.753ENSSPUG00000015525CPSF39784.753Sphenodon_punctatus
ENSACLG00000014484cpsf39995.317ENSSPAG00000018579cpsf39795.317Stegastes_partitus
ENSACLG00000014484cpsf39988.554ENSSPAG00000002906CPSF39987.700Stegastes_partitus
ENSACLG00000014484cpsf39985.865ENSSSCG00000020799CPSF39984.370Sus_scrofa
ENSACLG00000014484cpsf39985.457ENSTGUG00000013016CPSF39885.457Taeniopygia_guttata
ENSACLG00000014484cpsf39991.982ENSTRUG00000007030cpsf39591.982Takifugu_rubripes
ENSACLG00000014484cpsf36373.183ENSTRUG00000013905CPSF39973.183Takifugu_rubripes
ENSACLG00000014484cpsf38490.517ENSTBEG00000002707CPSF38290.517Tupaia_belangeri
ENSACLG00000014484cpsf38772.796ENSTTRG00000000861CPSF38572.796Tursiops_truncatus
ENSACLG00000014484cpsf39687.051ENSUAMG00000007535CPSF39287.051Ursus_americanus
ENSACLG00000014484cpsf39983.439ENSUMAG00000003676CPSF39490.860Ursus_maritimus
ENSACLG00000014484cpsf39586.435ENSVPAG00000008041CPSF310086.435Vicugna_pacos
ENSACLG00000014484cpsf39985.865ENSVVUG00000002194CPSF39785.865Vulpes_vulpes
ENSACLG00000014484cpsf39985.135ENSXETG00000008263cpsf39685.135Xenopus_tropicalis
ENSACLG00000014484cpsf39993.202ENSXCOG00000019695cpsf310089.747Xiphophorus_couchianus
ENSACLG00000014484cpsf35879.032ENSXCOG00000000957-8780.108Xiphophorus_couchianus
ENSACLG00000014484cpsf39988.438ENSXMAG00000027291CPSF39788.438Xiphophorus_maculatus
ENSACLG00000014484cpsf39993.353ENSXMAG00000009784cpsf310093.146Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us