EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSACLG00000014702 (Gene tree)
Gene ID: 113029054
Gene Symbol: rnpc3
Alias: caliban|clbn|zgc:136847
Full Name: RNA-binding region (RNP1%2C RRM) containing 3
Gene Type: protein_coding
Species: Astatotilapia_calliptera
Status: putative
Strand: Minus strand
Length: 19834 bases
Position: chr9:10431762-10451595
Accession: ZDB-GENE-060312-35
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSACLP00000021666	RRM_1	PF00076.22	6.7e-15	1	2
ENSACLP00000021666	RRM_1	PF00076.22	6.7e-15	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSACLT00000022167	-	1497	-	ENSACLP00000021666	498 (aa)	-	-

Gene Model

Click here to download ENSACLG00000014702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSACLG00000014702's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSACLG00000014702	rnpc3	96	54.453	ENSG00000185946	RNPC3	96	57.895	Homo_sapiens
ENSACLG00000014702	rnpc3	99	86.028	ENSAPOG00000017371	rnpc3	99	86.028	Acanthochromis_polyacanthus
ENSACLG00000014702	rnpc3	96	55.061	ENSAMEG00000001694	RNPC3	94	55.152	Ailuropoda_melanoleuca
ENSACLG00000014702	rnpc3	99	84.736	ENSACIG00000021043	rnpc3	100	84.736	Amphilophus_citrinellus
ENSACLG00000014702	rnpc3	99	84.843	ENSAOCG00000014052	rnpc3	98	84.843	Amphiprion_ocellaris
ENSACLG00000014702	rnpc3	99	84.646	ENSAPEG00000008739	rnpc3	98	84.646	Amphiprion_percula
ENSACLG00000014702	rnpc3	99	80.312	ENSATEG00000021263	rnpc3	99	80.312	Anabas_testudineus
ENSACLG00000014702	rnpc3	89	56.570	ENSAPLG00000015605	RNPC3	99	56.570	Anas_platyrhynchos
ENSACLG00000014702	rnpc3	95	55.346	ENSACAG00000002029	RNPC3	96	53.484	Anolis_carolinensis
ENSACLG00000014702	rnpc3	96	54.545	ENSANAG00000019950	RNPC3	95	54.545	Aotus_nancymaae
ENSACLG00000014702	rnpc3	99	64.971	ENSAMXG00000033372	rnpc3	99	65.166	Astyanax_mexicanus
ENSACLG00000014702	rnpc3	96	54.970	ENSBTAG00000019091	RNPC3	95	54.970	Bos_taurus
ENSACLG00000014702	rnpc3	96	54.656	ENSCJAG00000035686	RNPC3	94	54.656	Callithrix_jacchus
ENSACLG00000014702	rnpc3	96	54.767	ENSCAFG00000019972	RNPC3	94	54.858	Canis_familiaris
ENSACLG00000014702	rnpc3	96	54.767	ENSCAFG00020011300	RNPC3	94	54.858	Canis_lupus_dingo
ENSACLG00000014702	rnpc3	96	55.354	ENSCHIG00000020361	RNPC3	95	54.858	Capra_hircus
ENSACLG00000014702	rnpc3	96	54.251	ENSTSYG00000030256	RNPC3	95	54.251	Carlito_syrichta
ENSACLG00000014702	rnpc3	85	44.494	ENSCAPG00000013600	RNPC3	97	44.671	Cavia_aperea
ENSACLG00000014702	rnpc3	96	52.906	ENSCPOG00000031638	RNPC3	95	52.906	Cavia_porcellus
ENSACLG00000014702	rnpc3	96	54.343	ENSCCAG00000024301	RNPC3	95	54.343	Cebus_capucinus
ENSACLG00000014702	rnpc3	96	41.942	ENSCATG00000035930	-	52	49.167	Cercocebus_atys
ENSACLG00000014702	rnpc3	96	54.343	ENSCATG00000002086	RNPC3	94	54.545	Cercocebus_atys
ENSACLG00000014702	rnpc3	96	51.473	ENSCLAG00000005169	RNPC3	95	52.429	Chinchilla_lanigera
ENSACLG00000014702	rnpc3	96	54.545	ENSCSAG00000001519	RNPC3	94	54.545	Chlorocebus_sabaeus
ENSACLG00000014702	rnpc3	96	57.143	ENSCPBG00000028311	RNPC3	95	57.347	Chrysemys_picta_bellii
ENSACLG00000014702	rnpc3	95	38.525	ENSCING00000021276	-	99	38.525	Ciona_intestinalis
ENSACLG00000014702	rnpc3	94	37.945	ENSCSAVG00000002800	-	76	56.154	Ciona_savignyi
ENSACLG00000014702	rnpc3	96	53.939	ENSCANG00000031444	RNPC3	94	54.234	Colobus_angolensis_palliatus
ENSACLG00000014702	rnpc3	97	54.326	ENSCGRG00001019276	Rnpc3	95	54.141	Cricetulus_griseus_chok1gshd
ENSACLG00000014702	rnpc3	89	52.516	ENSCGRG00000000053	Rnpc3	99	52.308	Cricetulus_griseus_crigri
ENSACLG00000014702	rnpc3	99	76.471	ENSCSEG00000013475	rnpc3	99	76.471	Cynoglossus_semilaevis
ENSACLG00000014702	rnpc3	99	78.865	ENSCVAG00000002645	rnpc3	99	78.865	Cyprinodon_variegatus
ENSACLG00000014702	rnpc3	99	64.118	ENSDARG00000011247	rnpc3	99	64.510	Danio_rerio
ENSACLG00000014702	rnpc3	96	54.564	ENSDNOG00000044555	-	95	54.564	Dasypus_novemcinctus
ENSACLG00000014702	rnpc3	96	54.970	ENSDNOG00000047498	-	95	54.970	Dasypus_novemcinctus
ENSACLG00000014702	rnpc3	96	53.862	ENSDORG00000027343	Rnpc3	95	53.862	Dipodomys_ordii
ENSACLG00000014702	rnpc3	97	50.097	ENSEBUG00000002068	rnpc3	98	50.195	Eptatretus_burgeri
ENSACLG00000014702	rnpc3	96	54.970	ENSEASG00005015957	RNPC3	94	54.970	Equus_asinus_asinus
ENSACLG00000014702	rnpc3	96	54.858	ENSECAG00000021148	RNPC3	94	54.858	Equus_caballus
ENSACLG00000014702	rnpc3	99	67.816	ENSELUG00000002264	rnpc3	99	66.411	Esox_lucius
ENSACLG00000014702	rnpc3	96	54.767	ENSFCAG00000024312	RNPC3	94	54.767	Felis_catus
ENSACLG00000014702	rnpc3	89	56.696	ENSFALG00000002580	RNPC3	99	56.125	Ficedula_albicollis
ENSACLG00000014702	rnpc3	96	54.049	ENSFDAG00000019948	RNPC3	95	54.049	Fukomys_damarensis
ENSACLG00000014702	rnpc3	99	75.152	ENSFHEG00000020647	rnpc3	99	75.152	Fundulus_heteroclitus
ENSACLG00000014702	rnpc3	100	68.849	ENSGMOG00000019213	rnpc3	99	68.390	Gadus_morhua
ENSACLG00000014702	rnpc3	96	56.557	ENSGALG00000005162	RNPC3	88	56.674	Gallus_gallus
ENSACLG00000014702	rnpc3	99	77.515	ENSGAFG00000017236	rnpc3	99	77.515	Gambusia_affinis
ENSACLG00000014702	rnpc3	100	80.512	ENSGACG00000002048	rnpc3	99	80.078	Gasterosteus_aculeatus
ENSACLG00000014702	rnpc3	96	57.755	ENSGAGG00000008438	RNPC3	94	57.755	Gopherus_agassizii
ENSACLG00000014702	rnpc3	97	48.140	ENSGGOG00000026201	-	95	48.041	Gorilla_gorilla
ENSACLG00000014702	rnpc3	82	100.000	ENSHBUG00000015966	rnpc3	85	100.000	Haplochromis_burtoni
ENSACLG00000014702	rnpc3	96	53.307	ENSHGLG00000001708	RNPC3	95	53.307	Heterocephalus_glaber_female
ENSACLG00000014702	rnpc3	96	53.307	ENSHGLG00100003005	RNPC3	95	53.307	Heterocephalus_glaber_male
ENSACLG00000014702	rnpc3	99	74.751	ENSHCOG00000017135	rnpc3	99	74.751	Hippocampus_comes
ENSACLG00000014702	rnpc3	99	63.492	ENSIPUG00000002916	rnpc3	99	63.601	Ictalurus_punctatus
ENSACLG00000014702	rnpc3	96	54.049	ENSSTOG00000025020	RNPC3	95	54.049	Ictidomys_tridecemlineatus
ENSACLG00000014702	rnpc3	96	52.857	ENSJJAG00000010203	Rnpc3	95	52.857	Jaculus_jaculus
ENSACLG00000014702	rnpc3	99	80.040	ENSKMAG00000017358	rnpc3	100	79.641	Kryptolebias_marmoratus
ENSACLG00000014702	rnpc3	99	82.178	ENSLBEG00000024901	rnpc3	97	82.178	Labrus_bergylta
ENSACLG00000014702	rnpc3	99	58.135	ENSLACG00000005720	RNPC3	92	55.952	Latimeria_chalumnae
ENSACLG00000014702	rnpc3	99	64.625	ENSLOCG00000007986	rnpc3	99	61.660	Lepisosteus_oculatus
ENSACLG00000014702	rnpc3	96	54.472	ENSLAFG00000032342	RNPC3	95	54.545	Loxodonta_africana
ENSACLG00000014702	rnpc3	96	54.343	ENSMFAG00000002004	RNPC3	94	54.545	Macaca_fascicularis
ENSACLG00000014702	rnpc3	96	41.996	ENSMFAG00000002917	-	94	41.458	Macaca_fascicularis
ENSACLG00000014702	rnpc3	96	54.141	ENSMMUG00000018039	RNPC3	94	54.343	Macaca_mulatta
ENSACLG00000014702	rnpc3	78	53.171	ENSMMUG00000002098	-	85	52.657	Macaca_mulatta
ENSACLG00000014702	rnpc3	96	51.111	ENSMNEG00000033950	RNPC3	94	51.313	Macaca_nemestrina
ENSACLG00000014702	rnpc3	96	40.833	ENSMNEG00000029209	-	99	42.035	Macaca_nemestrina
ENSACLG00000014702	rnpc3	96	54.343	ENSMLEG00000033628	RNPC3	94	54.545	Mandrillus_leucophaeus
ENSACLG00000014702	rnpc3	96	41.463	ENSMLEG00000034644	-	95	41.331	Mandrillus_leucophaeus
ENSACLG00000014702	rnpc3	99	72.835	ENSMAMG00000007496	rnpc3	99	72.835	Mastacembelus_armatus
ENSACLG00000014702	rnpc3	99	96.318	ENSMZEG00005020233	rnpc3	100	96.304	Maylandia_zebra
ENSACLG00000014702	rnpc3	89	56.484	ENSMGAG00000006381	RNPC3	99	56.484	Meleagris_gallopavo
ENSACLG00000014702	rnpc3	96	54.601	ENSMAUG00000001358	Rnpc3	95	54.601	Mesocricetus_auratus
ENSACLG00000014702	rnpc3	96	53.846	ENSMICG00000029591	RNPC3	95	53.737	Microcebus_murinus
ENSACLG00000014702	rnpc3	96	54.564	ENSMOCG00000013423	Rnpc3	94	54.564	Microtus_ochrogaster
ENSACLG00000014702	rnpc3	99	76.364	ENSMMOG00000005309	rnpc3	99	78.182	Mola_mola
ENSACLG00000014702	rnpc3	97	55.828	ENSMODG00000002946	RNPC3	95	55.828	Monodelphis_domestica
ENSACLG00000014702	rnpc3	98	75.992	ENSMALG00000015471	rnpc3	99	75.992	Monopterus_albus
ENSACLG00000014702	rnpc3	96	54.990	MGP_CAROLIEiJ_G0025555	Rnpc3	96	54.990	Mus_caroli
ENSACLG00000014702	rnpc3	96	55.172	ENSMUSG00000027981	Rnpc3	99	53.533	Mus_musculus
ENSACLG00000014702	rnpc3	96	54.767	MGP_PahariEiJ_G0027001	Rnpc3	96	54.767	Mus_pahari
ENSACLG00000014702	rnpc3	96	51.670	MGP_SPRETEiJ_G0026505	Rnpc3	96	54.970	Mus_spretus
ENSACLG00000014702	rnpc3	96	54.694	ENSMPUG00000007349	RNPC3	94	54.251	Mustela_putorius_furo
ENSACLG00000014702	rnpc3	96	54.435	ENSMLUG00000028743	RNPC3	94	54.435	Myotis_lucifugus
ENSACLG00000014702	rnpc3	96	54.564	ENSNGAG00000010939	Rnpc3	95	54.564	Nannospalax_galili
ENSACLG00000014702	rnpc3	100	99.398	ENSNBRG00000012196	rnpc3	97	99.398	Neolamprologus_brichardi
ENSACLG00000014702	rnpc3	96	54.453	ENSNLEG00000012013	RNPC3	95	54.656	Nomascus_leucogenys
ENSACLG00000014702	rnpc3	96	53.036	ENSODEG00000007612	RNPC3	95	53.347	Octodon_degus
ENSACLG00000014702	rnpc3	100	92.759	ENSONIG00000004770	rnpc3	100	93.443	Oreochromis_niloticus
ENSACLG00000014702	rnpc3	91	56.223	ENSOANG00000008220	RNPC3	99	56.223	Ornithorhynchus_anatinus
ENSACLG00000014702	rnpc3	96	54.234	ENSOCUG00000004016	RNPC3	95	53.939	Oryctolagus_cuniculus
ENSACLG00000014702	rnpc3	99	77.108	ENSORLG00000005694	rnpc3	99	76.861	Oryzias_latipes
ENSACLG00000014702	rnpc3	99	77.062	ENSORLG00020005513	rnpc3	99	77.200	Oryzias_latipes_hni
ENSACLG00000014702	rnpc3	99	76.861	ENSORLG00015002179	rnpc3	99	76.861	Oryzias_latipes_hsok
ENSACLG00000014702	rnpc3	99	77.867	ENSOMEG00000017737	rnpc3	99	77.867	Oryzias_melastigma
ENSACLG00000014702	rnpc3	96	54.858	ENSOGAG00000026182	RNPC3	95	54.858	Otolemur_garnettii
ENSACLG00000014702	rnpc3	96	55.354	ENSOARG00000018719	RNPC3	95	54.858	Ovis_aries
ENSACLG00000014702	rnpc3	97	48.866	ENSPPAG00000030278	-	97	48.866	Pan_paniscus
ENSACLG00000014702	rnpc3	96	54.234	ENSPPAG00000037459	RNPC3	95	54.435	Pan_paniscus
ENSACLG00000014702	rnpc3	96	54.675	ENSPPRG00000020246	RNPC3	94	54.675	Panthera_pardus
ENSACLG00000014702	rnpc3	96	54.675	ENSPTIG00000009887	RNPC3	96	54.675	Panthera_tigris_altaica
ENSACLG00000014702	rnpc3	97	48.247	ENSPTRG00000044227	-	97	48.247	Pan_troglodytes
ENSACLG00000014702	rnpc3	96	54.141	ENSPTRG00000033902	RNPC3	95	54.343	Pan_troglodytes
ENSACLG00000014702	rnpc3	96	44.672	ENSPANG00000029957	-	96	42.510	Papio_anubis
ENSACLG00000014702	rnpc3	96	54.453	ENSPANG00000012137	RNPC3	94	54.656	Papio_anubis
ENSACLG00000014702	rnpc3	98	66.000	ENSPKIG00000008828	rnpc3	97	63.800	Paramormyrops_kingsleyae
ENSACLG00000014702	rnpc3	64	53.823	ENSPSIG00000007396	RNPC3	99	55.046	Pelodiscus_sinensis
ENSACLG00000014702	rnpc3	99	65.680	ENSPMGG00000011742	rnpc3	98	65.408	Periophthalmus_magnuspinnatus
ENSACLG00000014702	rnpc3	92	51.064	ENSPEMG00000020112	Rnpc3	99	52.308	Peromyscus_maniculatus_bairdii
ENSACLG00000014702	rnpc3	96	41.556	ENSPMAG00000003778	rnpc3	96	44.250	Petromyzon_marinus
ENSACLG00000014702	rnpc3	97	56.442	ENSPCIG00000004415	-	95	56.442	Phascolarctos_cinereus
ENSACLG00000014702	rnpc3	99	79.487	ENSPFOG00000009895	rnpc3	99	79.487	Poecilia_formosa
ENSACLG00000014702	rnpc3	99	79.290	ENSPLAG00000012023	rnpc3	99	79.290	Poecilia_latipinna
ENSACLG00000014702	rnpc3	99	79.724	ENSPMEG00000003663	rnpc3	99	79.684	Poecilia_mexicana
ENSACLG00000014702	rnpc3	99	79.208	ENSPREG00000010206	rnpc3	99	79.208	Poecilia_reticulata
ENSACLG00000014702	rnpc3	80	50.242	ENSPPYG00000001102	RNPC3	93	50.242	Pongo_abelii
ENSACLG00000014702	rnpc3	100	99.398	ENSPNYG00000020603	rnpc3	100	99.398	Pundamilia_nyererei
ENSACLG00000014702	rnpc3	99	58.382	ENSPNAG00000000524	rnpc3	92	58.880	Pygocentrus_nattereri
ENSACLG00000014702	rnpc3	96	54.065	ENSRNOG00000017310	Rnpc3	95	54.268	Rattus_norvegicus
ENSACLG00000014702	rnpc3	96	51.210	ENSRBIG00000043897	RNPC3	94	51.411	Rhinopithecus_bieti
ENSACLG00000014702	rnpc3	96	54.343	ENSRROG00000032334	RNPC3	94	54.545	Rhinopithecus_roxellana
ENSACLG00000014702	rnpc3	96	54.656	ENSSBOG00000024473	RNPC3	95	54.656	Saimiri_boliviensis_boliviensis
ENSACLG00000014702	rnpc3	97	55.466	ENSSHAG00000011859	RNPC3	95	55.466	Sarcophilus_harrisii
ENSACLG00000014702	rnpc3	99	67.780	ENSSFOG00015013055	rnpc3	99	69.467	Scleropages_formosus
ENSACLG00000014702	rnpc3	99	79.102	ENSSMAG00000020346	rnpc3	99	79.102	Scophthalmus_maximus
ENSACLG00000014702	rnpc3	99	83.922	ENSSDUG00000006600	rnpc3	99	83.922	Seriola_dumerili
ENSACLG00000014702	rnpc3	99	83.922	ENSSLDG00000007979	rnpc3	99	83.922	Seriola_lalandi_dorsalis
ENSACLG00000014702	rnpc3	95	56.549	ENSSPUG00000008539	-	92	56.549	Sphenodon_punctatus
ENSACLG00000014702	rnpc3	95	53.992	ENSSPUG00000003872	-	90	53.992	Sphenodon_punctatus
ENSACLG00000014702	rnpc3	99	84.569	ENSSPAG00000005633	rnpc3	99	83.567	Stegastes_partitus
ENSACLG00000014702	rnpc3	96	53.649	ENSSSCG00000037254	RNPC3	95	55.375	Sus_scrofa
ENSACLG00000014702	rnpc3	89	57.271	ENSTGUG00000004795	-	99	57.271	Taeniopygia_guttata
ENSACLG00000014702	rnpc3	99	76.295	ENSTNIG00000018963	rnpc3	99	76.295	Tetraodon_nigroviridis
ENSACLG00000014702	rnpc3	96	54.970	ENSUMAG00000007775	RNPC3	96	55.061	Ursus_maritimus
ENSACLG00000014702	rnpc3	96	54.767	ENSVVUG00000000331	RNPC3	94	54.858	Vulpes_vulpes
ENSACLG00000014702	rnpc3	96	44.821	ENSXETG00000025027	rnpc3	96	44.088	Xenopus_tropicalis
ENSACLG00000014702	rnpc3	52	78.788	ENSXCOG00000005013	rnpc3	99	77.953	Xiphophorus_couchianus
ENSACLG00000014702	rnpc3	99	78.501	ENSXMAG00000006495	rnpc3	99	78.501	Xiphophorus_maculatus